BDGP Sequence Production Resources |
Search the DGRC for GM12243
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 122 |
Well: | 43 |
Vector: | pOT2 |
Associated Gene/Transcript | CG44325-RB |
Protein status: | GM12243.pep: gold |
Sequenced Size: | 749 |
Gene | Date | Evidence |
---|---|---|
CG7267 | 2008-06-05 | Manual selection by Joe Carlson |
CG7267-RB | 2009-01-21 | est gleaning |
749 bp assembled on 2009-04-22
GenBank Submission: BT082058.1
> GM12243.complete TGGCATCAACACGCACCAGCAAAATCAAGCGCATCCAGTCGACCCAATCC AGTTCCATTCCATAAAAGCCAACGAAAGCGAAATCTCAACCGAGCGTCAT GGAGTTCAACAATCGCCTCTTGCTGAAGATCATCGAGCTGGCCATCGCCA TCGCCTGCATTGTGCTATACGAGACGGTTGGTAACTTGTCCCTCCATCCG GTGATTGTGGCCGGCACCGTTGGTGGCTACACCGTCATCTGCGGCGTTCT GCTGATCGGTCATGTGCTCAACTCGCTGGTGGAGAAGCGCCTGAACGCCC TATTCTCGCTGATCGGCTGCCTGCTGTTCGTGGCCTCCGGAGCACTGGTG ATCGATGAGTGGCACGGCGGACTCCTGAATACCGATAGGAAGCGCCAGGC CATTGGAGCCGGTTCCTTGATGATCATCAATGCGGCTGTCTTCCTTCTGG ACACTCTCTGCATCTGCCGGACGTAAAGATTCCGTTTCGTCGTATATGTA CTGCATATCCGTTTATTTTTTTTTTTTCGCAAATCGAATAACTCGTGTTG ATAAGCATAATGAAACAAGAATCTATTGTAAATGTTAACGTAACATTTGT TTTTTTTTTTGTAGCTGTTTTATATGTATTTATACGTGTCTTAAGCTAAT CTCAGATATGCGCACGCAGATTATATACAGGAATCCATTAAATATATACA CATACACAACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7267.a | 960 | CG7267.a | 52..654 | 1..604 | 2935 | 99.3 | Plus |
CG7267-RB | 902 | CG7267-RB | 275..877 | 1..604 | 2935 | 99.3 | Plus |
CG7267.a | 960 | CG7267.a | 674..770 | 617..713 | 485 | 100 | Plus |
CG10970-RA | 1810 | CG10970-RA | 1..68 | 646..713 | 340 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 8963150..8963611 | 712..258 | 2050 | 96.8 | Minus |
chrX | 22417052 | chrX | 8970149..8970289 | 141..1 | 705 | 100 | Minus |
chrX | 22417052 | chrX | 8963679..8963799 | 260..140 | 605 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 9079555..9079900 | 604..258 | 1650 | 98.8 | Minus |
X | 23527363 | X | 9086434..9086574 | 141..1 | 705 | 100 | Minus |
X | 23527363 | X | 9079968..9080088 | 260..140 | 605 | 100 | Minus |
X | 23527363 | X | 9079439..9079535 | 713..617 | 485 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Circe | 7450 | Circe CIRC 7450bp | 6989..7102 | 547..659 | 126 | 60.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 8970150..8970289 | 1..140 | 100 | Minus | |
chrX | 8963150..8963610 | 259..712 | 97 | <- | Minus |
chrX | 8963681..8963798 | 141..258 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7267-RB | 1..378 | 99..476 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7267-RB | 1..378 | 99..476 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG44325-RB | 1..378 | 99..476 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG44325-RB | 1..378 | 99..476 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7267-RB | 20..631 | 1..619 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7267-RB | 20..631 | 1..619 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG44325-RB | 24..741 | 1..712 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG44325-RB | 24..741 | 1..712 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9078337..9078476 | 1..140 | 100 | Minus | |
X | 9071342..9071801 | 259..712 | 96 | <- | Minus |
X | 9071872..9071989 | 141..258 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9078337..9078476 | 1..140 | 100 | Minus | |
X | 9071342..9071801 | 259..712 | 96 | <- | Minus |
X | 9071872..9071989 | 141..258 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9078337..9078476 | 1..140 | 100 | Minus | |
X | 9071342..9071801 | 259..712 | 96 | <- | Minus |
X | 9071872..9071989 | 141..258 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 8965375..8965834 | 259..712 | 96 | <- | Minus |
arm_X | 8965905..8966022 | 141..258 | 100 | <- | Minus |
arm_X | 8972370..8972509 | 1..140 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9079440..9079899 | 259..712 | 96 | <- | Minus |
X | 9079970..9080087 | 141..258 | 100 | <- | Minus |
X | 9086435..9086574 | 1..140 | 100 | Minus |
Translation from 98 to 475
> GM12243.pep MEFNNRLLLKIIELAIAIACIVLYETVGNLSLHPVIVAGTVGGYTVICGV LLIGHVLNSLVEKRLNALFSLIGCLLFVASGALVIDEWHGGLLNTDRKRQ AIGAGSLMIINAAVFLLDTLCICRT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19114-PA | 125 | GF19114-PA | 1..125 | 1..125 | 512 | 81.6 | Plus |
Dana\GF21858-PA | 131 | GF21858-PA | 5..129 | 2..124 | 155 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19007-PA | 228 | GG19007-PA | 117..228 | 14..125 | 554 | 97.3 | Plus |
Dere\GG19007-PA | 228 | GG19007-PA | 1..90 | 1..88 | 185 | 44.4 | Plus |
Dere\GG17559-PA | 131 | GG17559-PA | 5..129 | 2..124 | 156 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17713-PA | 235 | GH17713-PA | 125..235 | 16..125 | 413 | 75.7 | Plus |
Dgri\GH17713-PA | 235 | GH17713-PA | 1..122 | 1..120 | 251 | 42.6 | Plus |
Dgri\GH12523-PA | 131 | GH12523-PA | 5..129 | 2..124 | 158 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG44325-PE | 125 | CG44325-PE | 1..125 | 1..125 | 627 | 100 | Plus |
CG44325-PB | 125 | CG44325-PB | 1..125 | 1..125 | 627 | 100 | Plus |
CG44325-PD | 146 | CG44325-PD | 1..125 | 1..125 | 627 | 100 | Plus |
CG44325-PC | 127 | CG44325-PC | 1..116 | 1..114 | 235 | 39.7 | Plus |
CG44325-PA | 146 | CG44325-PA | 1..135 | 1..114 | 205 | 34.1 | Plus |
CG15449-PA | 131 | CG15449-PA | 12..125 | 8..120 | 158 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15457-PA | 119 | GI15457-PA | 9..119 | 16..125 | 401 | 73 | Plus |
Dmoj\GI15456-PA | 128 | GI15456-PA | 1..124 | 1..122 | 255 | 43.5 | Plus |
Dmoj\GI14877-PA | 131 | GI14877-PA | 5..129 | 2..124 | 155 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13023-PA | 228 | GL13023-PA | 125..228 | 22..125 | 415 | 77.9 | Plus |
Dper\GL13023-PA | 228 | GL13023-PA | 1..90 | 1..88 | 214 | 47.8 | Plus |
Dper\GL16585-PA | 131 | GL16585-PA | 5..129 | 2..124 | 156 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20224-PA | 228 | GA20224-PA | 125..228 | 22..125 | 415 | 77.9 | Plus |
Dpse\GA20224-PA | 228 | GA20224-PA | 1..90 | 1..88 | 214 | 47.8 | Plus |
Dpse\GA13737-PA | 131 | GA13737-PA | 5..129 | 2..124 | 156 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13685-PA | 247 | GM13685-PA | 136..247 | 14..125 | 561 | 99.1 | Plus |
Dsec\GM13685-PA | 247 | GM13685-PA | 1..133 | 1..112 | 178 | 33.8 | Plus |
Dsec\GM22643-PA | 121 | GM22643-PA | 10..119 | 16..124 | 138 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16087-PA | 125 | GD16087-PA | 1..125 | 1..125 | 623 | 100 | Plus |
Dsim\GD15513-PA | 131 | GD15513-PA | 5..129 | 2..124 | 155 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19171-PA | 126 | GJ19171-PA | 1..126 | 1..125 | 481 | 77.8 | Plus |
Dvir\GJ19540-PA | 131 | GJ19540-PA | 12..129 | 8..124 | 159 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16752-PA | 206 | GK16752-PA | 96..206 | 15..125 | 442 | 79.3 | Plus |
Dwil\GK16752-PA | 206 | GK16752-PA | 1..94 | 1..92 | 241 | 47.9 | Plus |
Dwil\GK10090-PA | 131 | GK10090-PA | 5..129 | 2..124 | 158 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17420-PA | 230 | GE17420-PA | 125..230 | 22..125 | 482 | 89.6 | Plus |
Dyak\GE17420-PA | 230 | GE17420-PA | 1..90 | 1..88 | 192 | 45.6 | Plus |
Dyak\GE15320-PA | 131 | GE15320-PA | 5..129 | 2..124 | 155 | 32.5 | Plus |
Translation from 98 to 475
> GM12243.hyp MEFNNRLLLKIIELAIAIACIVLYETVGNLSLHPVIVAGTVGGYTVICGV LLIGHVLNSLVEKRLNALFSLIGCLLFVASGALVIDEWHGGLLNTDRKRQ AIGAGSLMIINAAVFLLDTLCICRT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG44325-PE | 125 | CG44325-PE | 1..125 | 1..125 | 627 | 100 | Plus |
CG44325-PB | 125 | CG44325-PB | 1..125 | 1..125 | 627 | 100 | Plus |
CG44325-PD | 146 | CG44325-PD | 1..125 | 1..125 | 627 | 100 | Plus |
CG44325-PC | 127 | CG44325-PC | 1..116 | 1..114 | 235 | 39.7 | Plus |
CG44325-PA | 146 | CG44325-PA | 1..135 | 1..114 | 205 | 34.1 | Plus |