BDGP Sequence Production Resources |
Search the DGRC for GM12270
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 122 |
Well: | 70 |
Vector: | pOT2 |
Associated Gene/Transcript | Cct5-RA |
Protein status: | GM12270.pep: gold |
Preliminary Size: | 1943 |
Sequenced Size: | 1938 |
Gene | Date | Evidence |
---|---|---|
CG8439 | 2001-01-01 | Release 2 assignment |
CG8439 | 2002-12-11 | Blastp of sequenced clone |
CG8439 | 2003-01-01 | Sim4 clustering to Release 3 |
Cct5 | 2008-04-29 | Release 5.5 accounting |
Cct5 | 2008-08-15 | Release 5.9 accounting |
Cct5 | 2008-12-18 | 5.12 accounting |
1938 bp (1938 high quality bases) assembled on 2002-12-11
GenBank Submission: AF172635
> GM12270.complete TCGTTCGTTCGTTCGTTGGAATAAAATAAACTCGGGAATTAAATCTTGGA AAAACGTGCGAATCCGTCATCCTTTCATCTAAAAAACCATGAGCGCCTTT CCCGGTACGTTCGCGTTCGACGAATATGGTCGGCCTTTCATCATCCTGCG CGACCAGGAGCGCCAGAAGCGCATCACAGGAACAGATGCCATAAAGACGC ACATTATGGCCGCCCGCCAGATCGCGTCCACCCTGAAGACCTCTCTGGGT CCCAAGGGTCTGGACAAGATCATGGTCAGTCCCGACGGCGACGTGACTGT GACCAACGATGGCGCCACCATCATGAAGCTGATGGAGGTTGACCACGAGA TTGCCAAGCTGATGGTGCAGCTGTCGCAGTCACAGGACGACGAGATCGGC GATGGAACCACCGGCGTTGTCGTGCTGGCCGGAGCACTCTTGGAGCAGGC CGAGGGACTGATCGACAGGGGCATTCATCCCATTCGCATCGCCGATGGCT TTGAATTGGCCGCCCAGTGCGCCATCAAGCAGCTGGACGCGATCGCCCAA CCCTTCCCCGTGGACCCGAAGAACAAGGAGCCACTTATCCAGATCGCCAT GACCACGCTGGGCAGCAAGATCGTGAACAAGTGCCATCGTCAGATGGCCG AAATGGCTGTGGATGCTGTGCTGAATGTGGCCGACATTGAGAAGAAGGAC GTGAACTTCGAGCTCATCAAGATCGAGACCAAGGTGGGCGGTCGCATGGA GGACTCGATGCTGGTGAAGGGTGTCATCGTTGACAAGACCCTCAGCCATT CGCAGATGCCCAAGGAGCTAAGGAACGTCAAGCTGGCCATTCTCACCTGC CCGTTTGAGCCCCCGAAGCCAAAGACCAAGCATAAGCTCGATGTTACCTC CGCGGAAGACTACAGGGCGCTGCGCGAGTACGAGCAGGAGAAGTTCACCC AGATGGTCAAGCAGGTGAAGGACGCCGGCGCCACCCTTGCCATCTGCCAG TGGGGCTTCGATGATGAGGCCAACCACCTGTTGCTTCAGCAGGAGCTGCC CGCCGTGCGCTGGGTTGGCGGTCCGGAGATCGAGCTGATTGCCATCGCCA CCGGTGGACGCATCGTGCCGCGTTTCGAAGAGCTCACGCCTGAGAAACTA GGTGTTGCGGGACTCGTTCGCGAAATGGCATTCGGAACATCCAAGGACAA GATGCTGGTCATCGAGGAGTGCAAAAACTCCAAGGCTGTGACCATCTTCT TGCGTGGAGGTAACGCCATGATCATTGCGGAGGCTAAGCGATCGATTCAC GATGCCATCTGCGTGGTGCGTTCGCTTGTGAAGGACTCGCGAATTGTTTA CGGTGGTGGAGCTGCCGAGATTAGCTGCTCGTTGGCTGTGGCCAAGGAGG CCGACCAACTGTCCACGCTGGAGCAGTACGCCTTCCGCGCCTTCTCCGTG GCCCTGGAGAGCATTCCGCTGGCTCTGGCGGAGAACAGCGGCCTGCATCC CATCGAGACGTTGTCGGAGCTGAAGGCCAGACAGGTGGCCGAGAAGAAGT CCAGCCTGGGTGTCGACTGCATGCTGTCGGGTGATTCGGACATGAAGAGC CATAACGTGGTGGAGTCGCTGCACTCGAAGAAGCAGCAGATTCTGCTCTC CACGCAGCTCGTCAAGATGATACTCAAGATCGACGACGTGCGCTCCAAGA ACGAAGGCGGCATGTAACGACCGCCCAGCAGCAGCATCATACATCAGATC TAGTTTCAGATTCACATCCCCACGCTTCGCTATCTCTTCACGAACAACAC CCGCGTCAAGCCTCATCTCTATGTACATCTGTATTAATTGTTTAATTTTA TTAATCCACAAGTTCTTTGGAAAAGAAGAAAATTACATTAAACAAGGGGC TATCCCTGTTCAAATACACTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 8062950..8063933 | 195..1178 | 4920 | 100 | Plus |
chr2R | 21145070 | chr2R | 8063992..8064734 | 1178..1920 | 3700 | 99.9 | Plus |
chr2R | 21145070 | chr2R | 8062048..8062243 | 1..196 | 980 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12175735..12176718 | 195..1178 | 4920 | 100 | Plus |
2R | 25286936 | 2R | 12176777..12177523 | 1178..1924 | 3720 | 99.9 | Plus |
2R | 25286936 | 2R | 12174833..12175028 | 1..196 | 980 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12176934..12177917 | 195..1178 | 4920 | 100 | Plus |
2R | 25260384 | 2R | 12177976..12178722 | 1178..1924 | 3720 | 99.8 | Plus |
2R | 25260384 | 2R | 12176032..12176227 | 1..196 | 980 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2793..2858 | 1675..1740 | 114 | 63.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 8062048..8062243 | 1..196 | 100 | -> | Plus |
chr2R | 8062952..8063933 | 197..1178 | 100 | -> | Plus |
chr2R | 8063993..8064734 | 1179..1920 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RA | 1..1629 | 89..1717 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RA | 1..1629 | 89..1717 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RA | 1..1629 | 89..1717 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RA | 1..1629 | 89..1717 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RA | 1..1629 | 89..1717 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RA | 58..1977 | 1..1920 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RA | 58..1977 | 1..1920 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RA | 32..1948 | 1..1917 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RA | 58..1977 | 1..1920 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RA | 32..1948 | 1..1917 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12174833..12175028 | 1..196 | 100 | -> | Plus |
2R | 12175737..12176718 | 197..1178 | 100 | -> | Plus |
2R | 12176778..12177519 | 1179..1920 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12174833..12175028 | 1..196 | 100 | -> | Plus |
2R | 12175737..12176718 | 197..1178 | 100 | -> | Plus |
2R | 12176778..12177519 | 1179..1920 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12174833..12175028 | 1..196 | 100 | -> | Plus |
2R | 12175737..12176718 | 197..1178 | 100 | -> | Plus |
2R | 12176778..12177519 | 1179..1920 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 8062338..8062533 | 1..196 | 100 | -> | Plus |
arm_2R | 8063242..8064223 | 197..1178 | 100 | -> | Plus |
arm_2R | 8064283..8065024 | 1179..1920 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12176936..12177917 | 197..1178 | 100 | -> | Plus |
2R | 12177977..12178718 | 1179..1920 | 99 | Plus | |
2R | 12176032..12176227 | 1..196 | 100 | -> | Plus |
Translation from 88 to 1716
> GM12270.pep MSAFPGTFAFDEYGRPFIILRDQERQKRITGTDAIKTHIMAARQIASTLK TSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVDHEIAKLMVQLSQSQD DEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQLD AIAQPFPVDPKNKEPLIQIAMTTLGSKIVNKCHRQMAEMAVDAVLNVADI EKKDVNFELIKIETKVGGRMEDSMLVKGVIVDKTLSHSQMPKELRNVKLA ILTCPFEPPKPKTKHKLDVTSAEDYRALREYEQEKFTQMVKQVKDAGATL AICQWGFDDEANHLLLQQELPAVRWVGGPEIELIAIATGGRIVPRFEELT PEKLGVAGLVREMAFGTSKDKMLVIEECKNSKAVTIFLRGGNAMIIAEAK RSIHDAICVVRSLVKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFR AFSVALESIPLALAENSGLHPIETLSELKARQVAEKKSSLGVDCMLSGDS DMKSHNVVESLHSKKQQILLSTQLVKMILKIDDVRSKNEGGM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12298-PA | 542 | GF12298-PA | 1..542 | 1..542 | 2820 | 98 | Plus |
Dana\GF20588-PA | 321 | GF20588-PA | 1..321 | 189..542 | 1491 | 83.9 | Plus |
Dana\GF15661-PA | 533 | GF15661-PA | 24..528 | 32..534 | 827 | 37.9 | Plus |
Dana\GF19192-PA | 533 | GF19192-PA | 24..518 | 37..534 | 682 | 35.6 | Plus |
Dana\GF17067-PA | 544 | GF17067-PA | 6..530 | 15..541 | 633 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20252-PA | 542 | GG20252-PA | 1..542 | 1..542 | 2864 | 99.8 | Plus |
Dere\GG10247-PA | 533 | GG10247-PA | 24..528 | 32..534 | 822 | 38.1 | Plus |
Dere\GG18286-PA | 533 | GG18286-PA | 24..518 | 37..534 | 687 | 35.6 | Plus |
Dere\GG12510-PA | 557 | GG12510-PA | 14..533 | 28..534 | 637 | 32.1 | Plus |
Dere\GG21785-PA | 544 | GG21785-PA | 6..530 | 15..541 | 629 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19719-PA | 541 | GH19719-PA | 1..540 | 1..540 | 2789 | 97.4 | Plus |
Dgri\GH11666-PA | 533 | GH11666-PA | 24..528 | 32..534 | 804 | 37.7 | Plus |
Dgri\GH12396-PA | 533 | GH12396-PA | 24..518 | 37..534 | 687 | 35.8 | Plus |
Dgri\GH18443-PA | 557 | GH18443-PA | 14..533 | 28..534 | 639 | 32.2 | Plus |
Dgri\GH18159-PA | 544 | GH18159-PA | 6..530 | 15..541 | 630 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CCT5-PA | 542 | CG8439-PA | 1..542 | 1..542 | 2717 | 100 | Plus |
CCT5-PB | 512 | CG8439-PB | 7..512 | 37..542 | 2530 | 100 | Plus |
CCT4-PA | 533 | CG5525-PA | 24..528 | 32..534 | 820 | 37.5 | Plus |
CCT2-PA | 535 | CG7033-PA | 7..520 | 16..534 | 707 | 34.4 | Plus |
CCT1-PA | 557 | CG5374-PA | 14..537 | 28..538 | 674 | 32 | Plus |
CCT1-PB | 557 | CG5374-PB | 14..537 | 28..538 | 674 | 32 | Plus |
CCT3-PD | 544 | CG8977-PD | 6..530 | 15..541 | 651 | 31 | Plus |
CCT3-PC | 544 | CG8977-PC | 6..530 | 15..541 | 651 | 31 | Plus |
CCT3-PB | 544 | CG8977-PB | 6..530 | 15..541 | 651 | 31 | Plus |
CCT3-PA | 544 | CG8977-PA | 6..530 | 15..541 | 651 | 31 | Plus |
CCT7-PA | 544 | CG8351-PA | 17..525 | 31..541 | 612 | 28.9 | Plus |
CCT6-PA | 533 | CG8231-PA | 19..523 | 34..534 | 587 | 30.6 | Plus |
CCT8-PA | 546 | CG8258-PA | 27..533 | 33..541 | 535 | 29.4 | Plus |
Hsp60A-PB | 573 | CG12101-PB | 43..443 | 45..430 | 182 | 23.4 | Plus |
Hsp60A-PA | 573 | CG12101-PA | 43..443 | 45..430 | 182 | 23.4 | Plus |
Hsp60C-PB | 576 | CG7235-PB | 47..485 | 45..469 | 182 | 22.3 | Plus |
Hsp60C-PC | 576 | CG7235-PC | 47..485 | 45..469 | 182 | 22.3 | Plus |
Hsp60C-PA | 576 | CG7235-PA | 47..485 | 45..469 | 182 | 22.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20138-PA | 541 | GI20138-PA | 1..540 | 1..540 | 2772 | 96.7 | Plus |
Dmoj\GI17110-PA | 533 | GI17110-PA | 24..528 | 32..534 | 831 | 38.1 | Plus |
Dmoj\GI14726-PA | 514 | GI14726-PA | 5..499 | 37..534 | 680 | 37 | Plus |
Dmoj\GI10788-PA | 557 | GI10788-PA | 14..533 | 28..534 | 640 | 31.9 | Plus |
Dmoj\GI10112-PA | 544 | GI10112-PA | 6..530 | 15..541 | 635 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11023-PA | 542 | GL11023-PA | 1..542 | 1..542 | 2780 | 96.9 | Plus |
Dper\GL19739-PA | 533 | GL19739-PA | 13..528 | 21..534 | 822 | 37.3 | Plus |
Dper\GL13090-PA | 521 | GL13090-PA | 7..506 | 16..534 | 650 | 33.4 | Plus |
Dper\GL23334-PA | 557 | GL23334-PA | 14..533 | 28..534 | 630 | 31.5 | Plus |
Dper\GL24528-PA | 533 | GL24528-PA | 6..519 | 15..541 | 589 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21078-PA | 542 | GA21078-PA | 1..542 | 1..542 | 2780 | 96.9 | Plus |
Dpse\GA18950-PA | 533 | GA18950-PA | 13..528 | 21..534 | 821 | 37.3 | Plus |
Dpse\GA20046-PA | 533 | GA20046-PA | 24..518 | 37..534 | 676 | 35.4 | Plus |
Dpse\GA21448-PA | 544 | GA21448-PA | 6..530 | 15..541 | 632 | 31 | Plus |
Dpse\GA18830-PA | 557 | GA18830-PA | 14..533 | 28..534 | 630 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21339-PA | 542 | GM21339-PA | 1..542 | 1..542 | 2860 | 99.6 | Plus |
Dsec\GM26064-PA | 533 | GM26064-PA | 24..528 | 32..534 | 821 | 37.9 | Plus |
Dsec\GM13717-PA | 533 | GM13717-PA | 24..518 | 37..534 | 669 | 34.6 | Plus |
Dsec\GM23644-PA | 557 | GM23644-PA | 14..533 | 28..534 | 639 | 32.1 | Plus |
Dsec\GM15181-PA | 544 | GM15181-PA | 6..530 | 15..541 | 629 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22106-PA | 516 | GD22106-PA | 24..511 | 32..534 | 744 | 35.8 | Plus |
Dsim\T-cp1-PA | 557 | GD18453-PA | 14..533 | 28..534 | 639 | 32.1 | Plus |
Dsim\GD19118-PA | 544 | GD19118-PA | 6..530 | 15..541 | 629 | 31 | Plus |
Dsim\GD24772-PA | 449 | GD24772-PA | 1..434 | 95..534 | 544 | 33 | Plus |
Dsim\GD10130-PA | 546 | GD10130-PA | 27..533 | 33..541 | 497 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19908-PA | 541 | GJ19908-PA | 1..540 | 1..540 | 2781 | 97.2 | Plus |
Dvir\GJ16148-PA | 533 | GJ16148-PA | 24..528 | 32..534 | 823 | 37.7 | Plus |
Dvir\GJ19440-PA | 533 | GJ19440-PA | 5..518 | 16..534 | 702 | 35.7 | Plus |
Dvir\GJ14386-PA | 557 | GJ14386-PA | 14..533 | 28..534 | 639 | 31.9 | Plus |
Dvir\GJ23334-PA | 544 | GJ23334-PA | 6..530 | 15..541 | 625 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23011-PA | 542 | GK23011-PA | 1..542 | 1..542 | 2805 | 97.4 | Plus |
Dwil\GK14617-PA | 533 | GK14617-PA | 24..528 | 32..534 | 826 | 37.7 | Plus |
Dwil\GK16400-PA | 533 | GK16400-PA | 24..518 | 37..534 | 673 | 35.8 | Plus |
Dwil\GK14439-PA | 557 | GK14439-PA | 14..533 | 28..534 | 646 | 32.4 | Plus |
Dwil\GK13436-PA | 544 | GK13436-PA | 6..530 | 15..541 | 626 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12411-PA | 542 | GE12411-PA | 1..542 | 1..542 | 2853 | 99.4 | Plus |
Dyak\GE12130-PA | 533 | GE12130-PA | 24..528 | 32..534 | 822 | 38.1 | Plus |
Dyak\GE15818-PA | 533 | GE15818-PA | 24..518 | 37..534 | 689 | 35.6 | Plus |
Dyak\GE24032-PA | 557 | GE24032-PA | 14..533 | 28..534 | 638 | 32.1 | Plus |
Dyak\GE24588-PA | 544 | GE24588-PA | 6..530 | 15..541 | 629 | 31 | Plus |
Translation from 88 to 1716
> GM12270.hyp MSAFPGTFAFDEYGRPFIILRDQERQKRITGTDAIKTHIMAARQIASTLK TSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVDHEIAKLMVQLSQSQD DEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQLD AIAQPFPVDPKNKEPLIQIAMTTLGSKIVNKCHRQMAEMAVDAVLNVADI EKKDVNFELIKIETKVGGRMEDSMLVKGVIVDKTLSHSQMPKELRNVKLA ILTCPFEPPKPKTKHKLDVTSAEDYRALREYEQEKFTQMVKQVKDAGATL AICQWGFDDEANHLLLQQELPAVRWVGGPEIELIAIATGGRIVPRFEELT PEKLGVAGLVREMAFGTSKDKMLVIEECKNSKAVTIFLRGGNAMIIAEAK RSIHDAICVVRSLVKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFR AFSVALESIPLALAENSGLHPIETLSELKARQVAEKKSSLGVDCMLSGDS DMKSHNVVESLHSKKQQILLSTQLVKMILKIDDVRSKNEGGM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cct5-PA | 542 | CG8439-PA | 1..542 | 1..542 | 2717 | 100 | Plus |
Cct5-PB | 512 | CG8439-PB | 7..512 | 37..542 | 2530 | 100 | Plus |
CG5525-PA | 533 | CG5525-PA | 24..528 | 32..534 | 820 | 37.5 | Plus |
CG7033-PA | 535 | CG7033-PA | 7..520 | 16..534 | 707 | 34.4 | Plus |
T-cp1-PA | 557 | CG5374-PA | 14..537 | 28..538 | 674 | 32 | Plus |