BDGP Sequence Production Resources |
Search the DGRC for GM13047
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 130 |
Well: | 47 |
Vector: | pOT2 |
Associated Gene/Transcript | RpS5a-RA |
Protein status: | GM13047.pep: gold |
Preliminary Size: | 999 |
Sequenced Size: | 873 |
Gene | Date | Evidence |
---|---|---|
CG8922 | 2001-01-01 | Release 2 assignment |
CG8922 | 2002-01-03 | Blastp of sequenced clone |
CG8922 | 2003-01-01 | Sim4 clustering to Release 3 |
RpS5a | 2008-04-29 | Release 5.5 accounting |
RpS5a | 2008-08-15 | Release 5.9 accounting |
RpS5a | 2008-12-18 | 5.12 accounting |
873 bp (873 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075368
> GM13047.complete CAGGCGTTTGCCTTTGCGCTGACATCGTATCTCGATTTCTTCTGTGACAA ACATGGCCGAAGTTGCTGAAAACGTGGTGGAGACCTTCGAGGAGCCAGCG GCACCTATGGAAGCCGAGGTGGCCGAGACGATCCTGGAGACAAATGTGGT GTCCACCACTGAGCTGCCGGAGATCAAGCTGTTCGGCCGCTGGTCTTGCG ACGATGTCACCGTTAACGACATCTCTCTGCAGGATTACATCTCGGTGAAG GAGAAGTTTGCCCGCTATCTTCCCCATTCCGCCGGACGTTATGCCGCCAA GCGTTTCCGCAAGGCCCAGTGCCCCATTGTGGAGCGTTTGACCTGCTCCC TGATGATGAAGGGTCGCAACAACGGCAAGAAGCTGATGGCCTGCCGCATC GTCAAGCACTCGTTCGAGATCATTCATCTGCTCACCGGGGAGAACCCTCT GCAGATCCTGGTCAGCGCCATCATCAACTCGGGACCCCGTGAGGACTCCA CCCGTATTGGACGTGCCGGTACCGTCCGTCGCCAGGCCGTCGATGTGTCG CCCCTGCGTCGCGTCAACCAGGCTATCTGGCTGCTGTGCACTGGAGCTCG TGAGGCTGCCTTCAGGAACATCAAGACCATCGCCGAGTGCCTGGCTGATG AGCTGATCAACGCTGCTAAGGGATCTTCCAACTCGTACGCCATCAAGAAG AAGGATGAGTTGGAGCGTGTCGCCAAGTCCAACCGTTAAGGAGACATCAT CACCAGCAAAAACAAACTTCTGTCTGTTTTTTTTTATACAAATAACGTGT GTACACTGAGAAATGATACACTAAAACTAAAATAAACAACAAGATGAAAA ATTCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 17036276..17036678 | 454..52 | 2015 | 100 | Minus |
chr3R | 27901430 | chr3R | 10725599..10726005 | 572..166 | 970 | 82.6 | Minus |
chrX | 22417052 | chrX | 17033066..17033251 | 854..669 | 930 | 100 | Minus |
chrX | 22417052 | chrX | 17034493..17034615 | 572..450 | 615 | 100 | Minus |
chr3R | 27901430 | chr3R | 10725173..10725344 | 740..569 | 545 | 87.8 | Minus |
chrX | 22417052 | chrX | 17034095..17034196 | 671..570 | 510 | 100 | Minus |
chrX | 22417052 | chrX | 17037671..17037721 | 51..1 | 255 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 17146798..17147200 | 454..52 | 2015 | 100 | Minus |
3R | 32079331 | 3R | 14900952..14901358 | 572..166 | 970 | 82.6 | Minus |
X | 23542271 | X | 17143587..17143773 | 855..669 | 935 | 100 | Minus |
X | 23542271 | X | 17145015..17145137 | 572..450 | 615 | 100 | Minus |
3R | 32079331 | 3R | 14900526..14900697 | 740..569 | 545 | 87.8 | Minus |
X | 23542271 | X | 17144617..17144718 | 671..570 | 510 | 100 | Minus |
X | 23542271 | X | 17148204..17148254 | 51..1 | 255 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 17154896..17155298 | 454..52 | 2015 | 100 | Minus |
3R | 31820162 | 3R | 14641783..14642189 | 572..166 | 970 | 82.5 | Minus |
X | 23527363 | X | 17151685..17151871 | 855..669 | 935 | 100 | Minus |
X | 23527363 | X | 17153113..17153235 | 572..450 | 615 | 100 | Minus |
3R | 31820162 | 3R | 14641357..14641528 | 740..569 | 545 | 87.7 | Minus |
X | 23527363 | X | 17152715..17152816 | 671..570 | 510 | 100 | Minus |
X | 23527363 | X | 17156302..17156352 | 51..1 | 255 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 17033066..17033249 | 671..854 | 100 | <- | Minus |
chrX | 17034096..17034194 | 572..670 | 100 | <- | Minus |
chrX | 17034494..17034610 | 455..571 | 100 | <- | Minus |
chrX | 17036276..17036678 | 52..454 | 100 | <- | Minus |
chrX | 17037671..17037721 | 1..51 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS5a-RA | 1..687 | 53..739 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS5a-RA | 1..687 | 53..739 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS5a-RA | 1..687 | 53..739 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS5a-RA | 1..687 | 53..739 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS5a-RB | 1..687 | 53..739 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS5a-RA | 1..854 | 1..854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS5a-RA | 1..854 | 1..854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS5a-RA | 11..864 | 1..854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS5a-RA | 1..854 | 1..854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS5a-RA | 11..864 | 1..854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17143588..17143771 | 671..854 | 100 | <- | Minus |
X | 17144618..17144716 | 572..670 | 100 | <- | Minus |
X | 17145016..17145132 | 455..571 | 100 | <- | Minus |
X | 17146798..17147200 | 52..454 | 100 | <- | Minus |
X | 17148204..17148254 | 1..51 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17143588..17143771 | 671..854 | 100 | <- | Minus |
X | 17144618..17144716 | 572..670 | 100 | <- | Minus |
X | 17145016..17145132 | 455..571 | 100 | <- | Minus |
X | 17146798..17147200 | 52..454 | 100 | <- | Minus |
X | 17148204..17148254 | 1..51 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17143588..17143771 | 671..854 | 100 | <- | Minus |
X | 17144618..17144716 | 572..670 | 100 | <- | Minus |
X | 17145016..17145132 | 455..571 | 100 | <- | Minus |
X | 17146798..17147200 | 52..454 | 100 | <- | Minus |
X | 17148204..17148254 | 1..51 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 17037621..17037804 | 671..854 | 100 | <- | Minus |
arm_X | 17038651..17038749 | 572..670 | 100 | <- | Minus |
arm_X | 17039049..17039165 | 455..571 | 100 | <- | Minus |
arm_X | 17040831..17041233 | 52..454 | 100 | <- | Minus |
arm_X | 17042237..17042287 | 1..51 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17154896..17155298 | 52..454 | 100 | <- | Minus |
X | 17156302..17156352 | 1..51 | 100 | Minus | |
X | 17151686..17151869 | 671..854 | 100 | <- | Minus |
X | 17152716..17152814 | 572..670 | 100 | <- | Minus |
X | 17153114..17153230 | 455..571 | 100 | <- | Minus |
Translation from 52 to 738
> GM13047.pep MAEVAENVVETFEEPAAPMEAEVAETILETNVVSTTELPEIKLFGRWSCD DVTVNDISLQDYISVKEKFARYLPHSAGRYAAKRFRKAQCPIVERLTCSL MMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSGPREDST RIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADE LINAAKGSSNSYAIKKKDELERVAKSNR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22379-PA | 227 | GF22379-PA | 1..227 | 1..228 | 1170 | 97.4 | Plus |
Dana\GF17170-PA | 230 | GF17170-PA | 4..230 | 3..228 | 960 | 79.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18202-PA | 228 | GG18202-PA | 1..228 | 1..228 | 1209 | 100 | Plus |
Dere\GG20979-PA | 230 | GG20979-PA | 6..230 | 4..228 | 969 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24635-PA | 228 | GH24635-PA | 1..228 | 1..228 | 1140 | 94.8 | Plus |
Dgri\GH19518-PA | 242 | GH19518-PA | 1..242 | 1..228 | 966 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpS5a-PD | 228 | CG8922-PD | 1..228 | 1..228 | 1153 | 100 | Plus |
RpS5a-PC | 228 | CG8922-PC | 1..228 | 1..228 | 1153 | 100 | Plus |
RpS5a-PB | 228 | CG8922-PB | 1..228 | 1..228 | 1153 | 100 | Plus |
RpS5a-PA | 228 | CG8922-PA | 1..228 | 1..228 | 1153 | 100 | Plus |
RpS5b-PA | 230 | CG7014-PA | 1..230 | 4..228 | 929 | 79.1 | Plus |
RpS5b-PB | 180 | CG7014-PB | 1..175 | 4..173 | 657 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15824-PA | 227 | GI15824-PA | 1..227 | 1..228 | 1167 | 96.5 | Plus |
Dmoj\GI22995-PA | 242 | GI22995-PA | 38..242 | 6..228 | 962 | 79.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20334-PA | 228 | GL20334-PA | 1..228 | 1..228 | 1199 | 99.1 | Plus |
Dper\GL21699-PA | 234 | GL21699-PA | 7..234 | 6..228 | 977 | 79.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28883-PA | 228 | GA28883-PA | 1..228 | 1..228 | 1199 | 99.1 | Plus |
Dpse\GA20032-PA | 234 | GA20032-PA | 7..234 | 6..228 | 981 | 80.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13336-PA | 228 | GM13336-PA | 1..228 | 1..228 | 1209 | 100 | Plus |
Dsec\GM25815-PA | 230 | GM25815-PA | 1..230 | 4..228 | 979 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20391-PA | 230 | GD20391-PA | 1..230 | 4..228 | 979 | 80.9 | Plus |
Dsim\GD15697-PA | 147 | GD15697-PA | 50..147 | 131..228 | 483 | 95.9 | Plus |
Dsim\GD15697-PA | 147 | GD15697-PA | 1..54 | 1..54 | 279 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18677-PA | 227 | GJ18677-PA | 1..227 | 1..228 | 1164 | 96.1 | Plus |
Dvir\GJ24693-PA | 241 | GJ24693-PA | 46..241 | 33..228 | 963 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20078-PA | 230 | GK20078-PA | 1..230 | 1..228 | 1153 | 94.8 | Plus |
Dwil\GK18566-PA | 230 | GK18566-PA | 1..230 | 1..228 | 1153 | 94.8 | Plus |
Dwil\GK21212-PA | 230 | GK21212-PA | 1..230 | 1..228 | 1135 | 93 | Plus |
Translation from 52 to 738
> GM13047.hyp MAEVAENVVETFEEPAAPMEAEVAETILETNVVSTTELPEIKLFGRWSCD DVTVNDISLQDYISVKEKFARYLPHSAGRYAAKRFRKAQCPIVERLTCSL MMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSGPREDST RIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADE LINAAKGSSNSYAIKKKDELERVAKSNR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpS5a-PD | 228 | CG8922-PD | 1..228 | 1..228 | 1153 | 100 | Plus |
RpS5a-PC | 228 | CG8922-PC | 1..228 | 1..228 | 1153 | 100 | Plus |
RpS5a-PB | 228 | CG8922-PB | 1..228 | 1..228 | 1153 | 100 | Plus |
RpS5a-PA | 228 | CG8922-PA | 1..228 | 1..228 | 1153 | 100 | Plus |
RpS5b-PA | 230 | CG7014-PA | 1..230 | 4..228 | 929 | 79.1 | Plus |