![]() | BDGP Sequence Production Resources |
Search the DGRC for GM13341
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 133 |
Well: | 41 |
Vector: | pOT2 |
Associated Gene/Transcript | CG2100-RA |
Protein status: | GM13341.pep: gold |
Preliminary Size: | 1560 |
Sequenced Size: | 1573 |
Gene | Date | Evidence |
---|---|---|
CG2100 | 2001-01-01 | Release 2 assignment |
CG2100 | 2001-09-19 | Blastp of sequenced clone |
CG2100 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2100 | 2008-04-29 | Release 5.5 accounting |
CG2100 | 2008-08-15 | Release 5.9 accounting |
CG2100 | 2008-12-18 | 5.12 accounting |
1573 bp (1573 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058485
> GM13341.complete TAAACATTAGATCTTAAATTTTTCGACATTGCTTAGAAGTTTTGCCGGGC GGGCTCGAATATCTTACATGAATGGACCAAGCCTCCTCGTAAAGTTGACC ACACGTGCCTTCCTGTTATTCAACGGTCGCCCCCAGAATCGCTGGCTAAA GTCGATGGCCAATAGTATGGTTTGCTCGCGAGGCGTCTCTCCAGAATTGA TTGCCCAGCTGGGAAAACCACCTAGGATGCGCACAAACCCGGCATTCCGG AAGGTGGCAACTCCTGAGTTCAAAAGCATATTTACCCCCGAGCTGAATGA CCTTGTGGCGCTCTTTAAGAAGTACGACTACGAGCTGCGGATCGCCGGCG GAGCTGTGCGCGACATTCTGATGGGCATTCCACCGAAGGACATCGACTTG GCCACCACCGCCACTCCGGATCAGATGAAGCAGATGTTTGAGAAGGAGGA GGTGCGAATGATAAACGCAAACGGCGAAAAGCACGGCACCATCACTCCTA GAATCAATGACAAGGAGAACTTCGAGGTGACCACATTACGCATCGACATC CGCACCGATGGACGCCATGCGGAGGTGATGTACACGACTGACTGGCAACT GGATGCGAACCGCCGCGATTTGACAATCAACTCTATGTTCTTAGGCTTTG ATGGCACCGTGTACGATTACTTCTATGGCTACGATGATCTCCAGGAGCGT CGCGTGGTCTTCGTGGGCGAAGCAGATATTCGCATTAAGGAGGATTTTCT GCGCATCCTGCGCTATTTCCGATTCTACGGACGCATCGCAAGTGAGGAAA ACAACCACGATAAGGCCACCCTGGCAGCCATAAAGGAAAACGCGAAAGGT CTTGCGAGAATAAGTGGCGAGCGGATCTGGTCTGAGCTCCAAAAGATAGT GCCGGGAAATTTCGGAGCCGCATTGTTTCTGGAGATGCACCGTTGTAACC TATTCGAGTACATTGGGCTGCCTAAAGAGCCATATCTGGATGAGTTCGAC CGGCTTTGCAAAGCGCTAGATCAATTTGAAAAGCCACATCAGCCGATTTT GTACTTGGCAGGGATGCTGCACTCCGTGGAAGACGCCATGGAAATGCACA AACGCCTGAAGCTATCCGCCTACGAACGAGACCTGGCTAGGTTCATTACC CAGGAGCGGGAGAAGGTTGGCTCACAGTACACGACCCTGCGTGACTATCA GAAGTTGTGCTTACAAAAGTACATTCAAAGGGATTTCGTAGAACAGTTGC TGAAATACTCTGGCAAACTGGAACTTTACAACCAGCTCAAGTCGTGGGTC AAGCCGGACTTCCCGATCAGGGGAAATGCTTTGGCTCAGCGTGGTCTGAA CGGAATGAGGCTTGGTTTGGTGATGGATGAACTGAAACTTTTGTGGGCAG ACAGTGATTTTCAGCTAACACACGACGATTTACTGAAATGGATTCCCAAC GTACTGAAAAAGATACCAAGCGCTCCTGGTAAAGTGAAGCGAATGAAGTA GTATTGATTACATTTAGATGTAATCGATGTAAATAAATATATGGGTTTCC CTTGAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1560356..1560744 | 1166..1554 | 100 | <- | Minus |
chr3R | 1560806..1561970 | 1..1165 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2100-RA | 1..1434 | 68..1501 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2100-RB | 1..1434 | 68..1501 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2100-RA | 1..1434 | 68..1501 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2100-RA | 1..1434 | 68..1501 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2100-RA | 1..1434 | 68..1501 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2100-RA | 74..1627 | 1..1554 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2100-RB | 74..1627 | 1..1554 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2100-RA | 33..1586 | 1..1554 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2100-RA | 74..1627 | 1..1554 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2100-RA | 33..1586 | 1..1554 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5734709..5735097 | 1166..1554 | 100 | <- | Minus |
3R | 5735159..5736323 | 1..1165 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5734709..5735097 | 1166..1554 | 100 | <- | Minus |
3R | 5735159..5736323 | 1..1165 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5734709..5735097 | 1166..1554 | 100 | <- | Minus |
3R | 5735159..5736323 | 1..1165 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1560431..1560819 | 1166..1554 | 100 | <- | Minus |
arm_3R | 1560881..1562045 | 1..1165 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5475540..5475928 | 1166..1554 | 100 | <- | Minus |
3R | 5475990..5477154 | 1..1165 | 100 | Minus |
Translation from 67 to 1500
> GM13341.pep MNGPSLLVKLTTRAFLLFNGRPQNRWLKSMANSMVCSRGVSPELIAQLGK PPRMRTNPAFRKVATPEFKSIFTPELNDLVALFKKYDYELRIAGGAVRDI LMGIPPKDIDLATTATPDQMKQMFEKEEVRMINANGEKHGTITPRINDKE NFEVTTLRIDIRTDGRHAEVMYTTDWQLDANRRDLTINSMFLGFDGTVYD YFYGYDDLQERRVVFVGEADIRIKEDFLRILRYFRFYGRIASEENNHDKA TLAAIKENAKGLARISGERIWSELQKIVPGNFGAALFLEMHRCNLFEYIG LPKEPYLDEFDRLCKALDQFEKPHQPILYLAGMLHSVEDAMEMHKRLKLS AYERDLARFITQEREKVGSQYTTLRDYQKLCLQKYIQRDFVEQLLKYSGK LELYNQLKSWVKPDFPIRGNALAQRGLNGMRLGLVMDELKLLWADSDFQL THDDLLKWIPNVLKKIPSAPGKVKRMK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18651-PA | 487 | GF18651-PA | 1..485 | 1..477 | 1907 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10877-PA | 477 | GG10877-PA | 1..477 | 1..477 | 2356 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15807-PA | 457 | GH15807-PA | 13..455 | 40..477 | 1668 | 67.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2100-PB | 477 | CG2100-PB | 1..477 | 1..477 | 2494 | 100 | Plus |
CG2100-PA | 477 | CG2100-PA | 1..477 | 1..477 | 2494 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23728-PA | 450 | GI23728-PA | 14..448 | 40..475 | 1695 | 71.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23016-PA | 351 | GL23016-PA | 10..241 | 40..273 | 952 | 75.6 | Plus |
Dper\GL23016-PA | 351 | GL23016-PA | 238..351 | 367..477 | 338 | 57 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15240-PA | 450 | GA15240-PA | 10..450 | 40..477 | 1742 | 72.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10595-PA | 254 | GM10595-PA | 1..245 | 1..245 | 1260 | 95.9 | Plus |
Dsec\GM10596-PA | 188 | GM10596-PA | 1..188 | 290..477 | 929 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19587-PA | 476 | GD19587-PA | 1..476 | 1..477 | 2414 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23286-PA | 454 | GJ23286-PA | 14..445 | 40..471 | 1752 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14077-PA | 477 | GK14077-PA | 44..473 | 43..472 | 1729 | 71.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24143-PA | 477 | GE24143-PA | 1..477 | 1..477 | 2369 | 92 | Plus |
Translation from 67 to 1500
> GM13341.hyp MNGPSLLVKLTTRAFLLFNGRPQNRWLKSMANSMVCSRGVSPELIAQLGK PPRMRTNPAFRKVATPEFKSIFTPELNDLVALFKKYDYELRIAGGAVRDI LMGIPPKDIDLATTATPDQMKQMFEKEEVRMINANGEKHGTITPRINDKE NFEVTTLRIDIRTDGRHAEVMYTTDWQLDANRRDLTINSMFLGFDGTVYD YFYGYDDLQERRVVFVGEADIRIKEDFLRILRYFRFYGRIASEENNHDKA TLAAIKENAKGLARISGERIWSELQKIVPGNFGAALFLEMHRCNLFEYIG LPKEPYLDEFDRLCKALDQFEKPHQPILYLAGMLHSVEDAMEMHKRLKLS AYERDLARFITQEREKVGSQYTTLRDYQKLCLQKYIQRDFVEQLLKYSGK LELYNQLKSWVKPDFPIRGNALAQRGLNGMRLGLVMDELKLLWADSDFQL THDDLLKWIPNVLKKIPSAPGKVKRMK*