BDGP Sequence Production Resources |
Search the DGRC for GM13370
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 133 |
Well: | 70 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9772-RC |
Protein status: | GM13370.pep: wuzgold |
Preliminary Size: | 1965 |
Sequenced Size: | 1975 |
Gene | Date | Evidence |
---|---|---|
CG9772 | 2001-01-01 | Release 2 assignment |
CG9772 | 2001-10-10 | Blastp of sequenced clone |
CG9772 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9772 | 2008-04-29 | Release 5.5 accounting |
CG9772 | 2008-08-15 | Release 5.9 accounting |
CG9772 | 2008-12-18 | 5.12 accounting |
1975 bp (1975 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060981
> GM13370.complete AGTTTTTGTGTTTACGGCGGTGAAAAAATAGATTTCGTGTAAATATGAGC AGTCGCAAGCACAGAGGCTCCGAAAACATGGAAAATTTGTGCCCGGTGAC CAGAAAGCGCTCGACTAATAAGAACCACGTCTCTGTTGTGGGCGCTCTAG TTTCCACTACGAAGTCATCGCACTACGAGCACCCTTCCTCGCCCTCGGCA CTAACTTTTGAGGCCCTAGAAGAGATGGGAATCGGAATGCTTGATTCCGA AGAAAGCAGCTCCTCAGCCCTCTCGGCCATCGCTTTGGCGGTTAGCGCCA CCAGCGACGACAACTCAAATGAGACGACCCCGTGCGCCAGTGTGTCGCGC ATGGCGCACCAGCTACAGCACACGCAACGGCTAAGTCTGGGCTCTACGGG GGACATCACACTGGATAGCCCAGCTGTGGAGGATTCACTGTCGATGTCCC GTCAATCGGCCGAGAAGCTGCAGATTCTGGCGCAGGCTAAGCGCTCGTCG TTGGGTTCTGAAGGTAGCGGCAATTCAAACTCGCCCAGCAAACGTTTGCG CAACCCCCTGGCTGCAGTCACCTGTAACAACCAGATTGATGGGACTGCTT CGCTCAATTTTCAGCCATCAACCAGCAGGTTGGCGCAAGTTCGCCAGGCA AAAAAGCCCTCGACAACAAATATTACAACCCGAATAGTGGCAGCGGACAG TTTCTTTGTGTTTCGCACCCCGGCCATGAGTGCCCACATCAACAGCGGCA TAAACTACTTTGAAAGACTTTCAGACGAAATACTACTTGACATCTTTAAG TGGCTCCCGAAGAAGACGCTGCTGCGCATGGCTACCGTTTGTCGACGCTT TAACCGCTGCTCTCGCGATGAGACTTTGTGGACAAGGCTAGATTTGGGTT TGCGGACAATTAGACCAGGTGCCCTCGAGCAAATTGTACGGCGGGGAGTC CTTGTAATACGTCTGGCCCAGACTAGTGTAAGTTACATCTAACATTATGT TTTCGGGAAACAAGAGCATCTAATCTTTGAACTGTAGATCCAGGAGCCCG CATTTGCACCATATACAGAAGTGTTTAGGACCCGATTACAATATCTTGAC CTGAGTATGGCTTCCATCACCCGAAGCTCACTGCTGACACTATTGTCCCA CTGCCGCCAGCTAAAGAAAATAAGCTTAGAGAATATTGAGCTCGATGATG ACATCTGTGCAGAGATCGCAAAGAATGAAGCTTTGGAGGCGGTCAATCTG ACTATGGCTAGTGGCCTGACGTCCAACAGTGTTCGCCTGATGATGGAGTC ACTTACCAGCCTAAGCAGCTTAAACATATCGTGGACTGACCTAAGTGCGG ATGCTGTTACGGCGTTGGTTACCCACATTTCCCCCAACTTAATTCGGCTC AATATCGCTGGCTGCCGCCGCGTTTTGTTTGACTCGCATGTTGCAACCCT GCAAAAACGGTGTCCTCAGTTGTTGGAGCTTGATCTATCTGATTGCAATA TTCTAACACCAACAGTCATTACTGCAATTATGAAGTTCAAGATGCTGGAA TATTTGTCCGTCTCCCGATGCTATCTTATTCCAGCAACCAAATTTATGTA AGATTTTTCCAGCAAGCGTCTGATTAATCCCTACCCAGTCATTTTCCTTG CAGTGAACTTAAGAGTATGCCCTCGCTAACCTATTTAGACATATTTGGGA TGCTGTCGGACACTGCAATGGAAGTCCTTGAGAAACAACTGCCAAAAATG GGTATAAACAAATTCATTCACAGTTCGGTATCCCGCCCGACTGTTGGCAC GCGACGCACCTCCATTTGGGGTCTGCGCACGCGCGACTAAGTCTCGACTC TGCTGCTTCCGTTACCATTTGAATTTGTTTTGCTGCGTAAGCCACCCGTA ACGCAGTTATTTTATTCTCAATTCAACAACATAAATAATCACATTTAGCT GTTCTTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9772-RC | 2136 | CG9772-RC | 37..1993 | 1..1957 | 9770 | 99.9 | Plus |
CG9772.c | 1932 | CG9772.c | 37..1014 | 1..978 | 4890 | 100 | Plus |
CG9772.b | 1897 | CG9772.b | 37..1013 | 1..977 | 4885 | 100 | Plus |
CG9772.c | 1932 | CG9772.c | 1014..1927 | 1044..1957 | 4555 | 99.8 | Plus |
CG9772.b | 1897 | CG9772.b | 1014..1573 | 1038..1597 | 2785 | 99.8 | Plus |
CG9772.b | 1897 | CG9772.b | 1574..1892 | 1639..1957 | 1595 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 161729..163065 | 1437..101 | 6685 | 100 | Minus |
chr3R | 27901430 | chr3R | 161147..161665 | 1956..1438 | 2580 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 163268..163370 | 103..1 | 515 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 4336009..4337345 | 1437..101 | 6685 | 100 | Minus |
3R | 32079331 | 3R | 4335426..4335945 | 1957..1438 | 2585 | 99.8 | Minus |
3R | 32079331 | 3R | 4337548..4337650 | 103..1 | 515 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 4076840..4078176 | 1437..101 | 6685 | 100 | Minus |
3R | 31820162 | 3R | 4076257..4076776 | 1957..1438 | 2585 | 99.8 | Minus |
3R | 31820162 | 3R | 4078379..4078481 | 103..1 | 515 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 161147..161665 | 1438..1956 | 99 | <- | Minus |
chr3R | 161729..163062 | 104..1437 | 100 | <- | Minus |
chr3R | 163268..163370 | 1..103 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9772-RA | 1..933 | 45..977 | 100 | == | Plus |
CG9772-RA | 934..1500 | 1038..1606 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9772-RA | 1..933 | 45..977 | 100 | == | Plus |
CG9772-RA | 934..1500 | 1038..1606 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Skp2-RA | 1..933 | 45..977 | 100 | == | Plus |
Skp2-RA | 934..1500 | 1038..1606 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9772-RA | 1..933 | 45..977 | 100 | == | Plus |
CG9772-RA | 934..1500 | 1038..1606 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Skp2-RA | 1..933 | 45..977 | 100 | == | Plus |
Skp2-RA | 934..1500 | 1038..1606 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9772-RC | 37..1992 | 1..1956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9772-RC | 37..1992 | 1..1956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Skp2-RA | 37..1013 | 1..977 | 100 | == | Plus |
Skp2-RA | 1014..1580 | 1038..1606 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9772-RC | 37..1992 | 1..1956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Skp2-RA | 25..1001 | 1..977 | 100 | == | Plus |
Skp2-RA | 1002..1568 | 1038..1606 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4335427..4335945 | 1438..1956 | 99 | <- | Minus |
3R | 4336009..4337342 | 104..1437 | 100 | <- | Minus |
3R | 4337548..4337650 | 1..103 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4335427..4335945 | 1438..1956 | 99 | <- | Minus |
3R | 4336009..4337342 | 104..1437 | 100 | <- | Minus |
3R | 4337548..4337650 | 1..103 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4335427..4335945 | 1438..1956 | 99 | <- | Minus |
3R | 4336009..4337342 | 104..1437 | 100 | <- | Minus |
3R | 4337548..4337650 | 1..103 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 161149..161667 | 1438..1956 | 99 | <- | Minus |
arm_3R | 161731..163064 | 104..1437 | 100 | <- | Minus |
arm_3R | 163270..163372 | 1..103 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4076258..4076776 | 1438..1956 | 99 | <- | Minus |
3R | 4076840..4078173 | 104..1437 | 100 | <- | Minus |
3R | 4078379..4078481 | 1..103 | 100 | Minus |
Translation from 44 to 991
> GM13370.hyp MSSRKHRGSENMENLCPVTRKRSTNKNHVSVVGALVSTTKSSHYEHPSSP SALTFEALEEMGIGMLDSEESSSSALSAIALAVSATSDDNSNETTPCASV SRMAHQLQHTQRLSLGSTGDITLDSPAVEDSLSMSRQSAEKLQILAQAKR SSLGSEGSGNSNSPSKRLRNPLAAVTCNNQIDGTASLNFQPSTSRLAQVR QAKKPSTTNITTRIVAADSFFVFRTPAMSAHINSGINYFERLSDEILLDI FKWLPKKTLLRMATVCRRFNRCSRDETLWTRLDLGLRTIRPGALEQIVRR GVLVIRLAQTSVSYI*
Translation from 44 to 991
> GM13370.pep MSSRKHRGSENMENLCPVTRKRSTNKNHVSVVGALVSTTKSSHYEHPSSP SALTFEALEEMGIGMLDSEESSSSALSAIALAVSATSDDNSNETTPCASV SRMAHQLQHTQRLSLGSTGDITLDSPAVEDSLSMSRQSAEKLQILAQAKR SSLGSEGSGNSNSPSKRLRNPLAAVTCNNQIDGTASLNFQPSTSRLAQVR QAKKPSTTNITTRIVAADSFFVFRTPAMSAHINSGINYFERLSDEILLDI FKWLPKKTLLRMATVCRRFNRCSRDETLWTRLDLGLRTIRPGALEQIVRR GVLVIRLAQTSVSYI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16815-PA | 561 | GF16815-PA | 1..315 | 1..312 | 1119 | 74.7 | Plus |
Dana\GF15907-PA | 383 | GF15907-PA | 35..301 | 56..312 | 819 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11654-PA | 561 | GG11654-PA | 1..314 | 1..312 | 1347 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18735-PA | 579 | GH18735-PA | 1..330 | 1..312 | 899 | 62.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Skp2-PE | 559 | CG9772-PE | 1..312 | 1..312 | 1555 | 99.7 | Plus |
Skp2-PA | 559 | CG9772-PA | 1..312 | 1..312 | 1555 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22887-PA | 589 | GI22887-PA | 1..340 | 1..312 | 889 | 58.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12326-PA | 533 | GL12326-PA | 1..308 | 1..312 | 1057 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22024-PC | 341 | GA22024-PC | 1..309 | 1..313 | 1066 | 73.2 | Plus |
Dpse\GA22024-PA | 555 | GA22024-PA | 1..308 | 1..312 | 1064 | 72.8 | Plus |
Dpse\GA22024-PB | 548 | GA22024-PB | 12..301 | 19..312 | 964 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10708-PA | 557 | GM10708-PA | 1..310 | 1..312 | 1380 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19685-PA | 557 | GD19685-PA | 1..310 | 1..312 | 1393 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14183-PA | 584 | GJ14183-PA | 1..336 | 1..312 | 962 | 64.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11443-PA | 590 | GK11443-PA | 1..342 | 1..312 | 888 | 58.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25359-PA | 561 | GE25359-PA | 1..314 | 1..312 | 1331 | 86 | Plus |