BDGP Sequence Production Resources |
Search the DGRC for GM13388
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 133 |
Well: | 88 |
Vector: | pOT2 |
Associated Gene/Transcript | spict-RA |
Protein status: | GM13388.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1461 |
Gene | Date | Evidence |
---|---|---|
CG12292 | 2001-01-01 | Release 2 assignment |
CG12292 | 2002-02-26 | Blastp of sequenced clone |
CG12292 | 2003-01-01 | Sim4 clustering to Release 3 |
spict | 2008-04-29 | Release 5.5 accounting |
spict | 2008-08-15 | Release 5.9 accounting |
spict | 2008-12-18 | 5.12 accounting |
1461 bp (1461 high quality bases) assembled on 2002-02-26
GenBank Submission: AY089521
> GM13388.complete GACTTTCTGGTGCGAAAAGCAGGAGCGGATCACACAGCGGATTAGCGATG AACAGCGACGGCGAAGCCTCATCACTGCAGATGCCCCAGGTGACGGTGGG TGGCATGCTGCCGGTAGAAGCCAACCAATCGCCTGAAACCGCTCCGCTTT CGATGGCGGAGACGGTGTCCAACACGGACTTCTACATCGGCGTTGGCCTG GCTATCTCCTCCTGCTTCTTCATCGGTTCCAGCTTCATCATCAAAAAGAA GGCACTCATTCGGCTGAGCAGGTACGGCGAGGTGCGGGCGTCAGCTGGAG GATTTGGATATCTGAGGGAGTGGATCTGGTGGGCGGGCCTTCTGACAATG GGTGTGGGAGAAGCGGCCAACTTTGCGGCCTACGCCTTTGCCCCCGCTTC ATTGGTCACTCCGTTAGGCGCGCTGAGTGTTATCATCTCAGCCGTGATGG CCTCCAGATTCCTCAACGAGAAGCTAAACTTGCTGGGGAAGATCGGCTGC TTTCTGTGCATACTGGGATCCACCATCATTGTGATTCACTCGCCCAAAGA GAAGGAGATCGAGGATTTGCAGCTGCTATTCGATATGCTTTTGGATCCGG TTTTCATTCTATACGTGATCTGCATCGTCGGTTCCACGGTGTTTGTGGCC TGCTTCATTGCACCACGGCATGGGCACACCAATGTGGTAGTTTATATCTT CTTGTGCTCCGGCATCGGATCTCTGACTGTGATGTCCTGCAAGGCATTGG GCCTAGCCATACGGCAGACGCTGAATAACGGAGGCAACGTCTTCCTCACA TGGATGCCATGGTTCCTGATCCTGGTCACCGTCACTTTCATAGCCATCCA GATGAACTATCTGAACAAGGCGCTGGATATATTCAATACTAGTATAGTTA CTCCAGTGTACTATGTAATGTTCACCACCCTGGTGATAGCTGCGTCTGCC ATCCTCTTCAAGGAGTTCACCCACATGCGGTTCGATGATATTCTCGGCGA TGTGTGCGGCTTCCTGATCGTTATCACAGCTGTGTTCCTGCTCAACGCGT TCAGAGATATTGATATATCGCTGAACGATGTACGTGGACTGATGCGACCG AAAATGCAGCGGGTGTCGCAGTTCGACGAGGAGGTGCTGGTCACCAGCAA TACCAAGGAACGTCGCCTGTCCTACGGATCCAGCGACATCTTCCGGAAGG CCTGACACAAGCAGCGCTACCAGGTCTAGTTACATCCCTTGCAGCGGCTG ACCTGAAGACAAGGTTGCTTTACTCCGTAAACGAGGCATTGGTCCAAATA TCTGTGCATATCACCTGCAATCACTTTCATCTCATCATTTCCATTTATTG TTCCTTCACTCTTGTTATTCATACATTCGCTAGCATAAGCACATAGGTTT AGGTTACACTTACATATATTAAACACGACTTAATGAAAACGAAAAAAAAA AAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 12703446..12703793 | 1..348 | 99 | -> | Plus |
chr2L | 12704292..12705384 | 349..1441 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spict-RA | 1..1158 | 48..1205 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spict-RA | 1..1158 | 48..1205 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spict-RB | 1..1182 | 48..1229 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spict-RA | 1..1158 | 48..1205 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spict-RB | 1..1182 | 48..1229 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spict-RA | 23..1463 | 1..1441 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spict-RA | 22..1462 | 1..1441 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spict-RA | 21..1461 | 1..1441 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spict-RA | 23..1463 | 1..1441 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spict-RA | 21..1461 | 1..1441 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12704745..12705092 | 1..348 | 99 | -> | Plus |
2L | 12705591..12706683 | 349..1441 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12704745..12705092 | 1..348 | 99 | -> | Plus |
2L | 12705591..12706683 | 349..1441 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12704745..12705092 | 1..348 | 99 | -> | Plus |
2L | 12705591..12706683 | 349..1441 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 12704745..12705092 | 1..348 | 99 | -> | Plus |
arm_2L | 12705591..12706683 | 349..1441 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12704745..12705092 | 1..348 | 99 | -> | Plus |
2L | 12705591..12706683 | 349..1441 | 99 | Plus |
Translation from 2 to 1204
> GM13388.hyp LSGAKSRSGSHSGLAMNSDGEASSLQMPQVTVGGMLPVEANQSPETAPLS MAETVSNTDFYIGVGLAISSCFFIGSSFIIKKKALIRLSRYGEVRASAGG FGYLREWIWWAGLLTMGVGEAANFAAYAFAPASLVTPLGALSVIISAVMA SRFLNEKLNLLGKIGCFLCILGSTIIVIHSPKEKEIEDLQLLFDMLLDPV FILYVICIVGSTVFVACFIAPRHGHTNVVVYIFLCSGIGSLTVMSCKALG LAIRQTLNNGGNVFLTWMPWFLILVTVTFIAIQMNYLNKALDIFNTSIVT PVYYVMFTTLVIAASAILFKEFTHMRFDDILGDVCGFLIVITAVFLLNAF RDIDISLNDVRGLMRPKMQRVSQFDEEVLVTSNTKERRLSYGSSDIFRKA *
Translation from 47 to 1204
> GM13388.pep MNSDGEASSLQMPQVTVGGMLPVEANQSPETAPLSMAETVSNTDFYIGVG LAISSCFFIGSSFIIKKKALIRLSRYGEVRASAGGFGYLREWIWWAGLLT MGVGEAANFAAYAFAPASLVTPLGALSVIISAVMASRFLNEKLNLLGKIG CFLCILGSTIIVIHSPKEKEIEDLQLLFDMLLDPVFILYVICIVGSTVFV ACFIAPRHGHTNVVVYIFLCSGIGSLTVMSCKALGLAIRQTLNNGGNVFL TWMPWFLILVTVTFIAIQMNYLNKALDIFNTSIVTPVYYVMFTTLVIAAS AILFKEFTHMRFDDILGDVCGFLIVITAVFLLNAFRDIDISLNDVRGLMR PKMQRVSQFDEEVLVTSNTKERRLSYGSSDIFRKA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14206-PA | 382 | GF14206-PA | 1..382 | 1..385 | 1707 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23795-PA | 385 | GG23795-PA | 1..385 | 1..385 | 1977 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13211-PA | 383 | GH13211-PA | 2..383 | 4..385 | 1636 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spict-PB | 393 | CG12292-PB | 1..385 | 1..385 | 1954 | 100 | Plus |
spict-PA | 385 | CG12292-PA | 1..385 | 1..385 | 1954 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14501-PA | 375 | GI14501-PA | 5..375 | 18..385 | 1566 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19725-PA | 380 | GL19725-PA | 4..380 | 6..385 | 1719 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11537-PA | 380 | GA11537-PA | 4..380 | 6..385 | 1719 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10042-PA | 385 | GM10042-PA | 1..385 | 1..385 | 2002 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23850-PA | 385 | GD23850-PA | 1..385 | 1..385 | 1985 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16278-PA | 375 | GJ16278-PA | 22..375 | 30..385 | 1590 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14661-PA | 385 | GK14661-PA | 1..385 | 1..385 | 1628 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18599-PA | 384 | GE18599-PA | 2..384 | 3..385 | 1975 | 97.4 | Plus |