BDGP Sequence Production Resources |
Search the DGRC for GM13395
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 133 |
Well: | 95 |
Vector: | pOT2 |
Associated Gene/Transcript | Prp38-RA |
Protein status: | GM13395.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1180 |
Gene | Date | Evidence |
---|---|---|
CG8054 | 2001-01-01 | Release 2 assignment |
CG30342 | 2002-05-16 | Blastp of sequenced clone |
CG30342 | 2003-01-01 | Sim4 clustering to Release 3 |
CG30342 | 2008-04-29 | Release 5.5 accounting |
CG30342 | 2008-08-15 | Release 5.9 accounting |
CG30342 | 2008-12-18 | 5.12 accounting |
1180 bp (1180 high quality bases) assembled on 2002-05-16
GenBank Submission: AY118843
> GM13395.complete CAAACGCCGAAAAATAAATAAATATATTCGGTGCATTTTCACATTTTGCA CTGCTGCCAATAGATACCCGAATTTCTGGATTGAAAAGTCCTATTTGAGT TACGATTGACAAGGAACAAGGGTTCAACTGAAAATGGCCAACCGCACGGT GAAGGAGGCCAAAAACGTGCACGGCACCAATCCGCAGTACCTCATCGAGA AGATCATCCGTTCGAGGATATACGACTCTAAGTACTGGAAGGAGCAATGC TTTGCTCTCACTGCGGAGCTTCTGGTGGACAAGGCAATGGAGCTGCGATT CGTCGGAGGCGTCTACGGCGGCAACATCAAGCCCACCCAGTTCCTCTGCC TCACACTCAAGATGCTGCAGATTCAGCCGGAAAAGGACATCGTAGTGGAG TTTATCAAGAACGAGGAGTTCAAGTACGTTCGAGCATTGGGAGCCTTCTA TCTACGGCTCACAGGAGCTGCCCTGGACTGCTACAAGTACCTGGAGCCGT TGTACATAGACAATCGAAAGCTGCGCCGCCAGAATCGCGCCGGCCAGTTC GAGATTGTCTACATGGATGAGTACATTGACGAACTGCTGCGCAACGACCG TGTCTGCGACATTATACTGCCCCGCATCCAGAAGCGCTCCATTCTCGAGG AAAACAACGAAATCGAGCCCAAGGTGTCAGTGCTGGATGAGGACTTGGAC GACGAACTGCCCAGCGACGAGGAGAAGGCAGACGAGACCAACCGGCCTAA GGAGAATTCGACAGCAGTGAGACGACCACGGAGAGTTCGCTCCAAGTCAA GGTCCCGCAGTCGGGAGCGCGAGCGAAGATCTGGGCAGGGCAACAGCGCC CGTTCCCGGGATTACTACGACGAACTGGAAGACTACGACCGCCAGCGAAA TAGGGTGCGCAATCGGGACACCCACAACGAGGACTATGACCGTCGGCAAA ACAATGGACGCCACGATCGCGAACGAGAGCGCCAAGATCGCGACAGTATC AGGGAGCGCGAGAGGGACGGCGACAGAGATCGCCGGGATAGGGAACGAGA GCGAGAACGTGACCGTGGCCGTCACGACCAGCGGGAACGGGACTCGCGAG GAGAGCGTGACCGACGACGCTACTAAAATTATAAATAAATTGAATTAATT AACCAGTAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prp38-RA | 1193 | Prp38-RA | 37..1193 | 1..1157 | 5785 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 5031562..5032718 | 1..1157 | 5755 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 9143995..9145156 | 1..1162 | 5810 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 9145194..9146355 | 1..1162 | 5810 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy9 | 5349 | gypsy9 GYPSY9 5349bp | 3694..3768 | 685..753 | 117 | 68 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5031562..5032686 | 1..1129 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30342-RA | 1..993 | 134..1126 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prp38-RA | 1..993 | 134..1126 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prp38-RA | 1..993 | 134..1126 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30342-RA | 1..993 | 134..1126 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prp38-RA | 1..993 | 134..1126 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30342-RA | 37..1193 | 1..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prp38-RA | 37..1193 | 1..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prp38-RA | 40..1196 | 1..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30342-RA | 37..1193 | 1..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prp38-RA | 40..1196 | 1..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9143995..9145151 | 1..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9143995..9145151 | 1..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9143995..9145151 | 1..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5031500..5032656 | 1..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9145194..9146350 | 1..1157 | 100 | Plus |
Translation from 133 to 1125
> GM13395.pep MANRTVKEAKNVHGTNPQYLIEKIIRSRIYDSKYWKEQCFALTAELLVDK AMELRFVGGVYGGNIKPTQFLCLTLKMLQIQPEKDIVVEFIKNEEFKYVR ALGAFYLRLTGAALDCYKYLEPLYIDNRKLRRQNRAGQFEIVYMDEYIDE LLRNDRVCDIILPRIQKRSILEENNEIEPKVSVLDEDLDDELPSDEEKAD ETNRPKENSTAVRRPRRVRSKSRSRSRERERRSGQGNSARSRDYYDELED YDRQRNRVRNRDTHNEDYDRRQNNGRHDRERERQDRDSIRERERDGDRDR RDRERERERDRGRHDQRERDSRGERDRRRY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11961-PA | 341 | GF11961-PA | 1..341 | 1..330 | 1142 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23421-PA | 330 | GG23421-PA | 1..330 | 1..330 | 1345 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22009-PA | 350 | GH22009-PA | 1..350 | 1..330 | 1257 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prp38-PA | 330 | CG30342-PA | 1..330 | 1..330 | 1722 | 100 | Plus |
CG2839-PA | 826 | CG2839-PA | 420..623 | 127..329 | 177 | 27.1 | Plus |
CG6340-PB | 513 | CG6340-PB | 60..192 | 193..324 | 176 | 32.4 | Plus |
CG2839-PA | 826 | CG2839-PA | 479..641 | 166..329 | 174 | 28.3 | Plus |
SF1-PC | 323 | CG5836-PC | 33..133 | 217..329 | 172 | 41.5 | Plus |
SF1-PB | 347 | CG5836-PB | 33..133 | 217..329 | 172 | 41.5 | Plus |
SF1-PA | 787 | CG5836-PA | 33..133 | 217..329 | 172 | 41.5 | Plus |
CG2839-PA | 826 | CG2839-PA | 266..419 | 166..329 | 169 | 25.6 | Plus |
CG2839-PA | 826 | CG2839-PA | 281..447 | 163..329 | 167 | 26 | Plus |
CG2839-PA | 826 | CG2839-PA | 320..475 | 164..329 | 167 | 25.3 | Plus |
CG6227-PA | 1224 | CG6227-PA | 8..149 | 189..329 | 167 | 32 | Plus |
Caper-PB | 594 | CG11266-PB | 44..158 | 195..328 | 166 | 34.3 | Plus |
Caper-PA | 594 | CG11266-PA | 44..158 | 195..328 | 166 | 34.3 | Plus |
CG6686-PB | 964 | CG6686-PB | 26..184 | 179..329 | 166 | 30.7 | Plus |
SF1-PC | 323 | CG5836-PC | 48..172 | 195..328 | 165 | 35.3 | Plus |
SF1-PB | 347 | CG5836-PB | 48..172 | 195..328 | 165 | 35.3 | Plus |
SF1-PA | 787 | CG5836-PA | 48..172 | 195..328 | 165 | 35.3 | Plus |
CG2839-PA | 826 | CG2839-PA | 302..464 | 164..329 | 161 | 24.1 | Plus |
CG2839-PA | 826 | CG2839-PA | 356..524 | 164..329 | 160 | 24.7 | Plus |
CG2839-PA | 826 | CG2839-PA | 473..629 | 166..329 | 160 | 28.9 | Plus |
CG2839-PA | 826 | CG2839-PA | 364..530 | 166..329 | 159 | 24.6 | Plus |
CG6686-PA | 970 | CG6686-PA | 26..190 | 179..329 | 159 | 29 | Plus |
CG7971-PG | 1062 | CG7971-PG | 513..651 | 189..328 | 158 | 34 | Plus |
CG7971-PA | 1062 | CG7971-PA | 513..651 | 189..328 | 158 | 34 | Plus |
CG7971-PC | 1107 | CG7971-PC | 513..651 | 189..328 | 158 | 34 | Plus |
ncm-PA | 1330 | CG12750-PA | 1173..1307 | 195..329 | 158 | 35.5 | Plus |
CG7971-PF | 1655 | CG7971-PF | 738..876 | 189..328 | 158 | 34 | Plus |
CG2839-PA | 826 | CG2839-PA | 377..541 | 166..329 | 157 | 26.9 | Plus |
ncm-PA | 1330 | CG12750-PA | 1179..1329 | 185..327 | 157 | 31.4 | Plus |
CG2839-PA | 826 | CG2839-PA | 497..657 | 172..329 | 156 | 23 | Plus |
CG2839-PA | 826 | CG2839-PA | 532..687 | 172..329 | 156 | 22.8 | Plus |
pea-PA | 1242 | CG8241-PA | 118..263 | 185..319 | 156 | 29.2 | Plus |
CG2839-PA | 826 | CG2839-PA | 531..671 | 189..329 | 155 | 26.6 | Plus |
CG2839-PA | 826 | CG2839-PA | 563..725 | 164..329 | 155 | 24.4 | Plus |
CG6686-PB | 964 | CG6686-PB | 80..238 | 194..329 | 154 | 30.1 | Plus |
SF1-PC | 323 | CG5836-PC | 1..166 | 181..328 | 153 | 33.5 | Plus |
SF1-PB | 347 | CG5836-PB | 1..166 | 181..328 | 153 | 33.5 | Plus |
SF1-PA | 787 | CG5836-PA | 1..166 | 181..328 | 153 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19715-PA | 341 | GI19715-PA | 1..281 | 1..273 | 1155 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17009-PA | 347 | GL17009-PA | 1..347 | 1..330 | 1284 | 79.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15773-PA | 347 | GA15773-PA | 1..347 | 1..330 | 1284 | 79.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21102-PA | 330 | GM21102-PA | 1..330 | 1..330 | 1679 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10637-PA | 330 | GD10637-PA | 1..330 | 1..330 | 1671 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17512-PA | 364 | GJ17512-PA | 1..290 | 1..278 | 1215 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23341-PA | 337 | GK23341-PA | 1..241 | 1..254 | 1083 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19260-PA | 330 | GE19260-PA | 1..330 | 1..330 | 1634 | 96.1 | Plus |
Translation from 133 to 1125
> GM13395.hyp MANRTVKEAKNVHGTNPQYLIEKIIRSRIYDSKYWKEQCFALTAELLVDK AMELRFVGGVYGGNIKPTQFLCLTLKMLQIQPEKDIVVEFIKNEEFKYVR ALGAFYLRLTGAALDCYKYLEPLYIDNRKLRRQNRAGQFEIVYMDEYIDE LLRNDRVCDIILPRIQKRSILEENNEIEPKVSVLDEDLDDELPSDEEKAD ETNRPKENSTAVRRPRRVRSKSRSRSRERERRSGQGNSARSRDYYDELED YDRQRNRVRNRDTHNEDYDRRQNNGRHDRERERQDRDSIRERERDGDRDR RDRERERERDRGRHDQRERDSRGERDRRRY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prp38-PA | 330 | CG30342-PA | 1..330 | 1..330 | 1722 | 100 | Plus |
CG2839-PA | 826 | CG2839-PA | 420..623 | 127..329 | 177 | 27.1 | Plus |
CG6340-PB | 513 | CG6340-PB | 60..192 | 193..324 | 176 | 32.4 | Plus |
CG2839-PA | 826 | CG2839-PA | 479..641 | 166..329 | 174 | 28.3 | Plus |
SF1-PC | 323 | CG5836-PC | 33..133 | 217..329 | 172 | 41.5 | Plus |
SF1-PB | 347 | CG5836-PB | 33..133 | 217..329 | 172 | 41.5 | Plus |
CG2839-PA | 826 | CG2839-PA | 266..419 | 166..329 | 169 | 25.6 | Plus |
CG2839-PA | 826 | CG2839-PA | 281..447 | 163..329 | 167 | 26 | Plus |
CG2839-PA | 826 | CG2839-PA | 320..475 | 164..329 | 167 | 25.3 | Plus |
SF1-PC | 323 | CG5836-PC | 48..172 | 195..328 | 165 | 35.3 | Plus |
CG2839-PA | 826 | CG2839-PA | 302..464 | 164..329 | 161 | 24.1 | Plus |
CG2839-PA | 826 | CG2839-PA | 356..524 | 164..329 | 160 | 24.7 | Plus |
CG2839-PA | 826 | CG2839-PA | 473..629 | 166..329 | 160 | 28.9 | Plus |
CG2839-PA | 826 | CG2839-PA | 364..530 | 166..329 | 159 | 24.6 | Plus |
CG2839-PA | 826 | CG2839-PA | 377..541 | 166..329 | 157 | 26.9 | Plus |
CG2839-PA | 826 | CG2839-PA | 497..657 | 172..329 | 156 | 23 | Plus |
CG2839-PA | 826 | CG2839-PA | 532..687 | 172..329 | 156 | 22.8 | Plus |
CG2839-PA | 826 | CG2839-PA | 531..671 | 189..329 | 155 | 26.6 | Plus |
CG2839-PA | 826 | CG2839-PA | 563..725 | 164..329 | 155 | 24.4 | Plus |
SF1-PC | 323 | CG5836-PC | 1..166 | 181..328 | 153 | 33.5 | Plus |