BDGP Sequence Production Resources |
Search the DGRC for GM13604
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 136 |
Well: | 4 |
Vector: | pOT2 |
Associated Gene/Transcript | Prosalpha2-RA |
Protein status: | GM13604.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 877 |
Gene | Date | Evidence |
---|---|---|
CG5266 | 2001-01-01 | Release 2 assignment |
CG5266 | 2001-11-29 | Blastp of sequenced clone |
CG5266 | 2003-01-01 | Sim4 clustering to Release 3 |
Pros25 | 2008-04-29 | Release 5.5 accounting |
Pros25 | 2008-08-15 | Release 5.9 accounting |
Pros25 | 2008-12-18 | 5.12 accounting |
877 bp (877 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069280
> GM13604.complete AAATAAGTCGGCTTTTTCATTTTACACATCAAATCACTGCATTTGCGGCC CAGGAAATATGGCTACCGAACGATACAGCTTTTCGTTGACCACGTTCAGT CCTTCCGGAAAACTCGTCCAACTGGAGTATGCATTGGCGGCCGTATCTGG CGGAGCTCCCTCCGTGGGCATTATAGCTTCCAACGGCGTCGTCATTGCCA CAGAGAACAAACACAAGTCACCGCTGTATGAGCAGCACAGTGTACATCGC GTGGAGATGATCTACAACCACATCGGCATGGTGTACTCGGGAATGGGTCC GGACTACCGCCTGCTGGTCAAGCAGGCCCGCAAGATCGCCCAGACGTACT ACCTGACCTACAAGGAGCCGATTCCAGTGTCACAGCTGGTGCAGCGCGTG GCCACGCTCATGCAGGAGTACACTCAGTCCGGTGGCGTTCGTCCCTTTGG CGTTTCCCTACTGATCTGCGGCTGGGACAATGATCGTCCGTATCTCTACC AATCCGATCCTTCGGGCGCCTACTTCGCCTGGAAGGCCACTGCCATGGGC AAGAACGCAGTGAACGGCAAAACTTTCCTGGAGAAGCGCTACAGCGAAGA TCTGGAGCTGGACGACGCTGTTCACACCGCCATCCTTACGCTGAAAGAAG GTTTTGAGGGAAAAATGACTGCCGACAACATTGAGATCGGAATCTGCGAT CAGAACGGATTCCAGCGTCTGGACCCCGCCTCAATCAAGGACTACTTGGC CAGCATCCCCTAAACTTAAACGCCCCGCTAAGATTACCACAAGCTAAGCT TTCTTAATAAGTACGGGACATTAAAAAACCAATAAAATTTTACAACTGGT GTTATTTGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 8257674..8257944 | 588..858 | 1355 | 100 | Plus |
chr3R | 27901430 | chr3R | 8257131..8257389 | 174..432 | 1295 | 100 | Plus |
chr3R | 27901430 | chr3R | 8257454..8257610 | 432..588 | 785 | 100 | Plus |
chr3R | 27901430 | chr3R | 8256771..8256869 | 1..99 | 495 | 100 | Plus |
chr3R | 27901430 | chr3R | 8256969..8257048 | 97..176 | 400 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 12432286..12432557 | 588..859 | 1360 | 100 | Plus |
3R | 32079331 | 3R | 12431743..12432001 | 174..432 | 1295 | 100 | Plus |
3R | 32079331 | 3R | 12432066..12432222 | 432..588 | 785 | 100 | Plus |
3R | 32079331 | 3R | 12431383..12431481 | 1..99 | 495 | 100 | Plus |
3R | 32079331 | 3R | 12431581..12431660 | 97..176 | 400 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 12173117..12173388 | 588..859 | 1360 | 100 | Plus |
3R | 31820162 | 3R | 12172574..12172832 | 174..432 | 1295 | 100 | Plus |
3R | 31820162 | 3R | 12172897..12173053 | 432..588 | 785 | 100 | Plus |
3R | 31820162 | 3R | 12172214..12172312 | 1..99 | 495 | 100 | Plus |
3R | 31820162 | 3R | 12172412..12172491 | 97..176 | 400 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
hobo | 2959 | hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). | 2495..2549 | 800..856 | 109 | 68.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 8257455..8257610 | 433..588 | 100 | -> | Plus |
chr3R | 8257134..8257389 | 177..432 | 100 | -> | Plus |
chr3R | 8256771..8256869 | 1..99 | 100 | -> | Plus |
chr3R | 8256972..8257048 | 100..176 | 100 | -> | Plus |
chr3R | 8257675..8257944 | 589..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pros25-RA | 1..705 | 59..763 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pros25-RA | 1..705 | 59..763 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosalpha2-RA | 1..705 | 59..763 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pros25-RA | 1..705 | 59..763 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosalpha2-RA | 1..705 | 59..763 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pros25-RA | 59..916 | 1..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pros25-RA | 59..916 | 1..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosalpha2-RA | 63..920 | 1..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pros25-RA | 59..916 | 1..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosalpha2-RA | 63..920 | 1..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12431383..12431481 | 1..99 | 100 | -> | Plus |
3R | 12431584..12431660 | 100..176 | 100 | -> | Plus |
3R | 12431746..12432001 | 177..432 | 100 | -> | Plus |
3R | 12432067..12432222 | 433..588 | 100 | -> | Plus |
3R | 12432287..12432556 | 589..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12431383..12431481 | 1..99 | 100 | -> | Plus |
3R | 12431584..12431660 | 100..176 | 100 | -> | Plus |
3R | 12431746..12432001 | 177..432 | 100 | -> | Plus |
3R | 12432067..12432222 | 433..588 | 100 | -> | Plus |
3R | 12432287..12432556 | 589..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12431383..12431481 | 1..99 | 100 | -> | Plus |
3R | 12431584..12431660 | 100..176 | 100 | -> | Plus |
3R | 12431746..12432001 | 177..432 | 100 | -> | Plus |
3R | 12432067..12432222 | 433..588 | 100 | -> | Plus |
3R | 12432287..12432556 | 589..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 8257468..8257723 | 177..432 | 100 | -> | Plus |
arm_3R | 8257789..8257944 | 433..588 | 100 | -> | Plus |
arm_3R | 8257105..8257203 | 1..99 | 100 | -> | Plus |
arm_3R | 8257306..8257382 | 100..176 | 100 | -> | Plus |
arm_3R | 8258009..8258278 | 589..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12172577..12172832 | 177..432 | 100 | -> | Plus |
3R | 12172898..12173053 | 433..588 | 100 | -> | Plus |
3R | 12173118..12173387 | 589..858 | 100 | Plus | |
3R | 12172214..12172312 | 1..99 | 100 | -> | Plus |
3R | 12172415..12172491 | 100..176 | 100 | -> | Plus |
Translation from 0 to 762
> GM13604.hyp NKSAFSFYTSNHCICGPGNMATERYSFSLTTFSPSGKLVQLEYALAAVSG GAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIYNHIGMVYSGMGP DYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFG VSLLICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSED LELDDAVHTAILTLKEGFEGKMTADNIEIGICDQNGFQRLDPASIKDYLA SIP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prosalpha2-PA | 234 | CG5266-PA | 1..234 | 20..253 | 1214 | 100 | Plus |
Prosalpha4-PA | 249 | CG3422-PA | 2..234 | 22..252 | 368 | 36.4 | Plus |
Prosalpha4T2-PB | 252 | CG4569-PB | 3..186 | 23..205 | 358 | 37.5 | Plus |
Prosalpha4T2-PA | 252 | CG4569-PA | 3..186 | 23..205 | 358 | 37.5 | Plus |
Prosalpha5-PB | 244 | CG10938-PB | 3..219 | 20..229 | 342 | 33.2 | Plus |
Translation from 58 to 762
> GM13604.pep MATERYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATEN KHKSPLYEQHSVHRVEMIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLT YKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICGWDNDRPYLYQSD PSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAILTLKEGFE GKMTADNIEIGICDQNGFQRLDPASIKDYLASIP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17957-PA | 234 | GF17957-PA | 1..234 | 1..234 | 1198 | 94.4 | Plus |
Dana\GF19028-PA | 249 | GF19028-PA | 2..231 | 3..230 | 398 | 35.5 | Plus |
Dana\GF12213-PA | 265 | GF12213-PA | 4..227 | 5..226 | 359 | 39 | Plus |
Dana\GF11246-PA | 252 | GF11246-PA | 3..191 | 4..192 | 354 | 35.8 | Plus |
Dana\GF13117-PA | 243 | GF13117-PA | 7..218 | 5..210 | 349 | 33 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18927-PA | 234 | GG18927-PA | 1..234 | 1..234 | 1249 | 98.7 | Plus |
Dere\GG17945-PA | 249 | GG17945-PA | 2..231 | 3..230 | 385 | 36.9 | Plus |
Dere\GG15180-PA | 251 | GG15180-PA | 2..181 | 3..181 | 363 | 36.7 | Plus |
Dere\GG19922-PA | 252 | GG19922-PA | 4..198 | 5..195 | 360 | 36.4 | Plus |
Dere\GG22074-PA | 264 | GG22074-PA | 4..227 | 5..226 | 358 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13898-PA | 234 | GH13898-PA | 1..234 | 1..234 | 1212 | 95.3 | Plus |
Dgri\GH12557-PA | 249 | GH12557-PA | 2..234 | 3..233 | 384 | 35.3 | Plus |
Dgri\GH21393-PA | 245 | GH21393-PA | 8..219 | 6..210 | 366 | 34.4 | Plus |
Dgri\GH20521-PA | 263 | GH20521-PA | 4..229 | 5..230 | 361 | 35.5 | Plus |
Dgri\GH20892-PA | 254 | GH20892-PA | 5..198 | 6..195 | 326 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prosalpha2-PA | 234 | CG5266-PA | 1..234 | 1..234 | 1214 | 100 | Plus |
Prosalpha4-PA | 249 | CG3422-PA | 2..234 | 3..233 | 368 | 36.4 | Plus |
Prosalpha4T2-PB | 252 | CG4569-PB | 3..186 | 4..186 | 358 | 37.5 | Plus |
Prosalpha4T2-PA | 252 | CG4569-PA | 3..186 | 4..186 | 358 | 37.5 | Plus |
Prosalpha3-PA | 264 | CG9327-PA | 4..231 | 5..230 | 343 | 39.1 | Plus |
Prosalpha5-PB | 244 | CG10938-PB | 3..219 | 1..210 | 342 | 33.2 | Plus |
Prosalpha5-PA | 244 | CG10938-PA | 3..219 | 1..210 | 342 | 33.2 | Plus |
Prosalpha3T-PA | 251 | CG1736-PA | 10..176 | 11..176 | 326 | 43.1 | Plus |
Prosalpha4T1-PA | 249 | CG17268-PA | 2..199 | 3..197 | 321 | 35.9 | Plus |
Prosalpha7-PA | 253 | CG1519-PA | 8..193 | 6..191 | 286 | 35.8 | Plus |
Prosalpha1-PB | 244 | CG18495-PB | 13..240 | 10..233 | 285 | 30.7 | Plus |
Prosalpha1-PA | 244 | CG18495-PA | 13..240 | 10..233 | 285 | 30.7 | Plus |
CG30382-PB | 244 | CG30382-PB | 13..240 | 10..233 | 285 | 30.7 | Plus |
CG30382-PA | 244 | CG30382-PA | 13..240 | 10..233 | 285 | 30.7 | Plus |
Prosalpha6T-PA | 289 | CG5648-PA | 1..205 | 1..209 | 270 | 30.7 | Plus |
Prosalpha6-PA | 279 | CG4904-PA | 1..181 | 1..183 | 265 | 32.8 | Plus |
Prosalpha6-PB | 279 | CG4904-PB | 1..181 | 1..183 | 265 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24829-PA | 234 | GI24829-PA | 1..234 | 1..234 | 1209 | 94.9 | Plus |
Dmoj\GI21618-PA | 236 | GI21618-PA | 9..236 | 3..230 | 422 | 36.8 | Plus |
Dmoj\GI11210-PA | 249 | GI11210-PA | 2..234 | 3..233 | 379 | 34.9 | Plus |
Dmoj\GI18573-PA | 245 | GI18573-PA | 7..219 | 5..210 | 367 | 33.8 | Plus |
Dmoj\GI21067-PA | 263 | GI21067-PA | 4..225 | 5..226 | 362 | 36.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27312-PA | 234 | GL27312-PA | 1..234 | 1..234 | 1217 | 96.2 | Plus |
Dper\GL19724-PA | 252 | GL19724-PA | 3..247 | 4..232 | 436 | 38.4 | Plus |
Dper\GL20413-PA | 252 | GL20413-PA | 2..235 | 3..233 | 403 | 32.2 | Plus |
Dper\GL11421-PA | 244 | GL11421-PA | 7..219 | 5..210 | 363 | 33.3 | Plus |
Dper\GL10139-PA | 262 | GL10139-PA | 4..225 | 5..226 | 352 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18772-PA | 234 | GA18772-PA | 1..234 | 1..234 | 1217 | 96.2 | Plus |
Dpse\GA28947-PA | 252 | GA28947-PA | 3..247 | 4..232 | 437 | 38.4 | Plus |
Dpse\GA25111-PA | 252 | GA25111-PA | 2..235 | 3..233 | 403 | 32.2 | Plus |
Dpse\GA25292-PA | 249 | GA25292-PA | 2..234 | 3..233 | 382 | 35.7 | Plus |
Dpse\GA17441-PA | 249 | GA17441-PA | 2..231 | 3..230 | 380 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24033-PA | 234 | GM24033-PA | 1..234 | 1..234 | 1258 | 100 | Plus |
Dsec\Pros28.1B-PA | 252 | GM11825-PA | 3..198 | 4..195 | 374 | 37.2 | Plus |
Dsec\GM15792-PA | 264 | GM15792-PA | 4..227 | 5..226 | 359 | 39.4 | Plus |
Dsec\GM21770-PA | 244 | GM21770-PA | 7..243 | 5..233 | 354 | 30.4 | Plus |
Dsec\Pros28.1A-PA | 251 | GM23164-PA | 2..180 | 3..180 | 337 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18834-PA | 234 | GD18834-PA | 1..234 | 1..234 | 1258 | 100 | Plus |
Dsim\Pros28.1B-PA | 252 | GD24946-PA | 3..198 | 4..195 | 371 | 36.7 | Plus |
Dsim\GD11553-PA | 264 | GD11553-PA | 4..227 | 5..226 | 359 | 39.4 | Plus |
Dsim\GD11263-PA | 244 | GD11263-PA | 7..243 | 5..233 | 347 | 30 | Plus |
Dsim\Pros28.1A-PA | 251 | GD20037-PA | 2..180 | 3..180 | 339 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24473-PA | 234 | GJ24473-PA | 1..234 | 1..234 | 1201 | 94 | Plus |
Dvir\GJ16557-PA | 234 | GJ16557-PA | 1..233 | 1..233 | 544 | 44.6 | Plus |
Dvir\Pros28.1-PA | 249 | GJ18504-PA | 2..234 | 3..233 | 385 | 36 | Plus |
Dvir\GJ20367-PA | 245 | GJ20367-PA | 7..219 | 5..210 | 365 | 34.3 | Plus |
Dvir\GJ21990-PA | 263 | GJ21990-PA | 4..198 | 5..195 | 350 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14404-PA | 234 | GK14404-PA | 1..234 | 1..234 | 1135 | 89.7 | Plus |
Dwil\GK25669-PA | 249 | GK25669-PA | 4..234 | 5..233 | 387 | 37.2 | Plus |
Dwil\GK19681-PA | 255 | GK19681-PA | 3..198 | 4..195 | 366 | 35.7 | Plus |
Dwil\GK22956-PA | 262 | GK22956-PA | 4..229 | 5..230 | 358 | 35.5 | Plus |
Dwil\GK21413-PA | 245 | GK21413-PA | 7..220 | 5..210 | 349 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26194-PA | 234 | GE26194-PA | 1..234 | 1..234 | 1246 | 98.7 | Plus |
Dyak\GE17253-PA | 249 | GE17253-PA | 2..231 | 3..230 | 384 | 36.5 | Plus |
Dyak\GE11446-PA | 252 | GE11446-PA | 3..182 | 4..182 | 370 | 38.3 | Plus |
Dyak\GE25043-PA | 251 | GE25043-PA | 2..181 | 3..181 | 364 | 37.2 | Plus |
Dyak\GE12155-PA | 264 | GE12155-PA | 4..227 | 5..226 | 358 | 39.4 | Plus |