Clone GM13766 Report

Search the DGRC for GM13766

Clone and Library Details

Library:GM
Tissue Source:Drosophila melanogaster ovary
Created by:Ling Hong
Date Registered:1997-11-24
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:137
Well:66
Vector:pOT2
Associated Gene/TranscriptAnxB11-RA
Protein status:GM13766.pep: gold
Preliminary Size:1426
Sequenced Size:1267

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9968 2002-06-12 Blastp of sequenced clone
CG9968 2003-01-01 Sim4 clustering to Release 3
Anxb11 2008-04-29 Release 5.5 accounting
Anxb11 2008-08-15 Release 5.9 accounting
Anxb11 2008-12-18 5.12 accounting

Clone Sequence Records

GM13766.complete Sequence

1267 bp (1267 high quality bases) assembled on 2002-06-12

GenBank Submission: AY122138

> GM13766.complete
TCGTGCCGAATTCGGCACGAGACATCGCGTTTGCCGATACTTAAATACTG
AATCTCAATCACCGGAAATTATCCACAGAATCTCCATAGAACCTCCCTCA
AAATGTATCCCTTCGGAACTCCCACGGTGGTGCCTGCCGCAAACTTCGAT
GCCGTCAAGGATGCTCACGACTTGCGCAAGGCCATGAAGGGCTTTGGAAC
AGATGAGGACGCTCTGATTAACATCATCTGTCGGCGATCCAACGAGCAGC
GCCAGGAGATCCAGCGCCAGTTCAAGACGCACTTCGGCAAGGACCTCATC
GAGGACATCAAGTCGGAGACGAGCGGCAACTTTGAGAAACTCCTCGTCGG
CCTGCTGCGTCCCATCGTGGACTACTACTGCGCCGAGCTAAACGATGCCA
TGGCTGGCCTGGGCACCGACGAGGAGGTCCTCATCGAGATCCTCTGCACG
CTGTCCAACATGGAGATCAATACGATCAAAAACCAGTACTTACGATTGTA
CGGCGCCCATTTGGAGTCTGAACTAAAGTCGGAGACGTCGGGCAACTTTA
AGCGGCTGCTCACCTCCTTGTGCACGGCGGCGCGGGATGAGAGTGGTCGC
GTGGATCCCGTGGCGGCCAAGAACGATGCTAGGGAGCTACTGAAAGCCGG
CGAACTGCGCGTCGGCACCGATGAGAGCATGTTCAACATGATCCTCTGCC
AGAGGAACTATCAGCAATTGAAACTGATATTCCAAGAGTACGAGGGCATG
ACTGGCCACTCGCTGGAGAAGGCGATCAAGAAGGAGTTCTCCGGCGATGT
GATGGAGGGCCTGATTGCCATCTACAGGTGCGTCACCAACAAGGCCGAAT
ACTTCGCTTCGCGCCTGCACAAGGCGATGGCCGGAATTGGCACCAATGAC
ACCCAGTTGATCCGTGTGATCATCACGCGCAGCGAGATTGATATGACGGA
CATTAAGGTAGCGTTCGAACGTCTGTACGGCAAGTCCCTCAAGAGCTGGA
TCAAGGGCGATACTTCGGGCCACTACAAGCACGCCCTTTATGCCCTGGTG
GGTGAACAGCGCTCCTCTTAAGAATCTCCGCATATACATATATATGTATT
ATTCAAACCAAATCCGACGTGAAATCAATTATTCGAATATGTATTATCTC
TTCTATGTATTCGTTCATTTAAATGCATACAACATACAAGAACACGCCAA
CGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAA

GM13766.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:47:40
Subject Length Description Subject Range Query Range Score Percent Strand
Anxb11-RA 1864 Anxb11-RA 120..1302 22..1204 5900 99.9 Plus
Anxb11.a 2431 Anxb11.a 780..1869 115..1204 5435 99.9 Plus
Anxb11-RB 2348 Anxb11-RB 697..1786 115..1204 5435 99.9 Plus
Anxb11.a 2431 Anxb11.a 120..214 22..116 475 100 Plus
Anxb11-RB 2348 Anxb11-RB 61..131 46..116 355 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:51:24
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 16308396..16308777 496..115 1910 100 Minus
chrX 22417052 chrX 16308084..16308317 730..497 1155 99.6 Minus
chrX 22417052 chrX 16307809..16308019 936..726 1055 100 Minus
chrX 22417052 chrX 16307427..16307625 1202..1004 995 100 Minus
chrX 22417052 chrX 16307683..16307754 1006..935 360 100 Minus
chrX 22417052 chrX 16309771..16309840 115..46 350 100 Minus
chr3R 27901430 chr3R 16892211..16892285 385..459 225 86.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:22:46 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:51:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16418668..16419049 496..115 1910 100 Minus
X 23542271 X 16418356..16418589 730..497 1140 99.1 Minus
X 23542271 X 16418081..16418291 936..726 1055 100 Minus
X 23542271 X 16417697..16417897 1204..1004 1005 100 Minus
X 23542271 X 16417955..16418026 1006..935 360 100 Minus
X 23542271 X 16420049..16420118 115..46 350 100 Minus
3R 32079331 3R 21068339..21068413 385..459 225 86.7 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 16426766..16427147 496..115 1910 100 Minus
X 23527363 X 16426454..16426687 730..497 1140 99.1 Minus
X 23527363 X 16426179..16426389 936..726 1055 100 Minus
X 23527363 X 16425795..16425995 1204..1004 1005 100 Minus
X 23527363 X 16426053..16426124 1006..935 360 100 Minus
X 23527363 X 16428147..16428216 115..46 350 100 Minus
3R 31820162 3R 20809170..20809244 385..459 225 86.6 Plus
Blast to na_te.dros performed 2019-03-16 03:51:23
Subject Length Description Subject Range Query Range Score Percent Strand
opus 7521 opus OPUS 7521bp 6376..6439 291..230 126 68.8 Minus

GM13766.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:52:33 Download gff for GM13766.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 16307427..16307623 1006..1202 100 <- Minus
chrX 16307684..16307752 937..1005 100 <- Minus
chrX 16307809..16308018 727..936 100 <- Minus
chrX 16308088..16308317 497..726 100 <- Minus
chrX 16308396..16308777 115..496 100 <- Minus
chrX 16309772..16309840 46..114 100 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:07:57 Download gff for GM13766.complete
Subject Subject Range Query Range Percent Splice Strand
Anxb11-RA 1..969 103..1071 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:22:36 Download gff for GM13766.complete
Subject Subject Range Query Range Percent Splice Strand
Anxb11-RA 1..969 103..1071 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:06:28 Download gff for GM13766.complete
Subject Subject Range Query Range Percent Splice Strand
AnxB11-RA 1..969 103..1071 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:13:22 Download gff for GM13766.complete
Subject Subject Range Query Range Percent Splice Strand
Anxb11-RA 1..969 103..1071 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:17:27 Download gff for GM13766.complete
Subject Subject Range Query Range Percent Splice Strand
AnxB11-RA 1..969 103..1071 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:49:21 Download gff for GM13766.complete
Subject Subject Range Query Range Percent Splice Strand
Anxb11-RA 23..1207 15..1202 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:22:36 Download gff for GM13766.complete
Subject Subject Range Query Range Percent Splice Strand
Anxb11-RA 23..1207 15..1202 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:06:28 Download gff for GM13766.complete
Subject Subject Range Query Range Percent Splice Strand
AnxB11-RA 49..1233 15..1202 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:13:22 Download gff for GM13766.complete
Subject Subject Range Query Range Percent Splice Strand
Anxb11-RA 23..1207 15..1202 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:17:27 Download gff for GM13766.complete
Subject Subject Range Query Range Percent Splice Strand
AnxB11-RA 49..1233 15..1202 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:52:33 Download gff for GM13766.complete
Subject Subject Range Query Range Percent Splice Strand
X 16418081..16418290 727..936 100 <- Minus
X 16417699..16417895 1006..1202 100 <- Minus
X 16417956..16418024 937..1005 100 <- Minus
X 16418360..16418589 497..726 99 <- Minus
X 16418668..16419049 115..496 100 <- Minus
X 16420050..16420118 46..114 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:52:33 Download gff for GM13766.complete
Subject Subject Range Query Range Percent Splice Strand
X 16418081..16418290 727..936 100 <- Minus
X 16417699..16417895 1006..1202 100 <- Minus
X 16417956..16418024 937..1005 100 <- Minus
X 16418360..16418589 497..726 99 <- Minus
X 16418668..16419049 115..496 100 <- Minus
X 16420050..16420118 46..114 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:52:33 Download gff for GM13766.complete
Subject Subject Range Query Range Percent Splice Strand
X 16418081..16418290 727..936 100 <- Minus
X 16417699..16417895 1006..1202 100 <- Minus
X 16417956..16418024 937..1005 100 <- Minus
X 16418360..16418589 497..726 99 <- Minus
X 16418668..16419049 115..496 100 <- Minus
X 16420050..16420118 46..114 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:06:28 Download gff for GM13766.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16312114..16312323 727..936 100 <- Minus
arm_X 16312393..16312622 497..726 99 <- Minus
arm_X 16311732..16311928 1006..1202 100 <- Minus
arm_X 16311989..16312057 937..1005 100 <- Minus
arm_X 16312701..16313082 115..496 100 <- Minus
arm_X 16314083..16314151 46..114 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:46:09 Download gff for GM13766.complete
Subject Subject Range Query Range Percent Splice Strand
X 16426179..16426388 727..936 100 <- Minus
X 16426458..16426687 497..726 99 <- Minus
X 16426766..16427147 115..496 100 <- Minus
X 16428148..16428216 46..114 100 <- Minus
X 16425797..16425993 1006..1202 100 <- Minus
X 16426054..16426122 937..1005 100 <- Minus

GM13766.hyp Sequence

Translation from 102 to 1070

> GM13766.hyp
MYPFGTPTVVPAANFDAVKDAHDLRKAMKGFGTDEDALINIICRRSNEQR
QEIQRQFKTHFGKDLIEDIKSETSGNFEKLLVGLLRPIVDYYCAELNDAM
AGLGTDEEVLIEILCTLSNMEINTIKNQYLRLYGAHLESELKSETSGNFK
RLLTSLCTAARDESGRVDPVAAKNDARELLKAGELRVGTDESMFNMILCQ
RNYQQLKLIFQEYEGMTGHSLEKAIKKEFSGDVMEGLIAIYRCVTNKAEY
FASRLHKAMAGIGTNDTQLIRVIITRSEIDMTDIKVAFERLYGKSLKSWI
KGDTSGHYKHALYALVGEQRSS*

GM13766.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 10:22:08
Subject Length Description Subject Range Query Range Score Percent Strand
AnxB11-PF 322 CG9968-PF 1..322 1..322 1649 100 Plus
AnxB11-PC 322 CG9968-PC 1..322 1..322 1649 100 Plus
AnxB11-PA 322 CG9968-PA 1..322 1..322 1649 100 Plus
AnxB11-PG 511 CG9968-PG 194..511 5..322 1624 100 Plus
AnxB11-PE 511 CG9968-PE 194..511 5..322 1624 100 Plus

GM13766.pep Sequence

Translation from 102 to 1070

> GM13766.pep
MYPFGTPTVVPAANFDAVKDAHDLRKAMKGFGTDEDALINIICRRSNEQR
QEIQRQFKTHFGKDLIEDIKSETSGNFEKLLVGLLRPIVDYYCAELNDAM
AGLGTDEEVLIEILCTLSNMEINTIKNQYLRLYGAHLESELKSETSGNFK
RLLTSLCTAARDESGRVDPVAAKNDARELLKAGELRVGTDESMFNMILCQ
RNYQQLKLIFQEYEGMTGHSLEKAIKKEFSGDVMEGLIAIYRCVTNKAEY
FASRLHKAMAGIGTNDTQLIRVIITRSEIDMTDIKVAFERLYGKSLKSWI
KGDTSGHYKHALYALVGEQRSS*

GM13766.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 08:53:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19282-PA 356 GF19282-PA 40..356 6..322 1601 94.3 Plus
Dana\GF16493-PA 341 GF16493-PA 7..323 2..317 932 59 Plus
Dana\GF20448-PA 321 GF20448-PA 7..319 6..317 746 48.9 Plus
Dana\GF16493-PA 341 GF16493-PA 11..167 157..320 186 30.5 Plus
Dana\GF20448-PA 321 GF20448-PA 189..321 31..160 170 30.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:53:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19323-PA 505 GG19323-PA 188..505 5..322 1692 99.4 Plus
Dere\GG24321-PA 341 GG24321-PA 7..323 2..317 925 58.7 Plus
Dere\GG18007-PA 320 GG18007-PA 6..318 6..317 775 47.9 Plus
Dere\GG24321-PA 341 GG24321-PA 11..167 157..320 189 31.1 Plus
Dere\GG18007-PA 320 GG18007-PA 188..320 31..160 168 30.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:53:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12030-PA 492 GH12030-PA 175..492 5..322 1567 90.9 Plus
Dgri\GH17323-PA 324 GH17323-PA 7..323 2..317 940 58.7 Plus
Dgri\GH12087-PA 320 GH12087-PA 6..310 6..309 777 47.9 Plus
Dgri\GH17323-PA 324 GH17323-PA 11..167 157..320 189 31.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:19:39
Subject Length Description Subject Range Query Range Score Percent Strand
AnxB11-PF 322 CG9968-PF 1..322 1..322 1649 100 Plus
AnxB11-PC 322 CG9968-PC 1..322 1..322 1649 100 Plus
AnxB11-PA 322 CG9968-PA 1..322 1..322 1649 100 Plus
AnxB11-PG 511 CG9968-PG 194..511 5..322 1624 100 Plus
AnxB11-PE 511 CG9968-PE 194..511 5..322 1624 100 Plus
AnxB11-PB 511 CG9968-PB 194..511 5..322 1624 100 Plus
AnxB11-PD 295 CG9968-PD 1..295 28..322 1505 100 Plus
AnxB9-PF 324 CG5730-PF 7..323 2..317 918 58.7 Plus
AnxB9-PE 324 CG5730-PE 7..323 2..317 918 58.7 Plus
AnxB9-PC 324 CG5730-PC 7..323 2..317 918 58.7 Plus
AnxB9-PB 324 CG5730-PB 7..321 2..315 886 57.1 Plus
AnxB9-PD 324 CG5730-PD 7..321 2..315 886 57.1 Plus
AnxB9-PA 324 CG5730-PA 7..321 2..315 864 56.2 Plus
AnxB10-PA 320 CG9579-PA 7..318 7..317 750 48.4 Plus
AnxB10-PB 321 CG9579-PB 7..319 7..317 739 48.2 Plus
AnxB11-PD 295 CG9968-PD 68..288 23..240 220 30.4 Plus
AnxB9-PB 324 CG5730-PB 178..323 17..158 214 34.2 Plus
AnxB9-PD 324 CG5730-PD 178..323 17..158 214 34.2 Plus
AnxB9-PF 324 CG5730-PF 19..167 168..320 197 33.3 Plus
AnxB9-PE 324 CG5730-PE 19..167 168..320 197 33.3 Plus
AnxB9-PC 324 CG5730-PC 19..167 168..320 197 33.3 Plus
AnxB9-PB 324 CG5730-PB 19..167 168..320 197 33.3 Plus
AnxB9-PD 324 CG5730-PD 19..167 168..320 197 33.3 Plus
AnxB9-PA 324 CG5730-PA 19..167 168..320 197 33.3 Plus
AnxB9-PB 324 CG5730-PB 23..247 87..316 196 28.9 Plus
AnxB9-PD 324 CG5730-PD 23..247 87..316 196 28.9 Plus
AnxB9-PA 324 CG5730-PA 23..247 87..316 196 28.9 Plus
AnxB10-PA 320 CG9579-PA 189..320 32..160 179 31.1 Plus
AnxB10-PB 321 CG9579-PB 189..321 32..160 168 30.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:53:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14303-PA 505 GI14303-PA 188..505 5..322 1571 91.2 Plus
Dmoj\GI22446-PA 324 GI22446-PA 7..323 2..317 915 58.7 Plus
Dmoj\GI11094-PA 320 GI11094-PA 7..318 7..317 762 46.5 Plus
Dmoj\GI22446-PA 324 GI22446-PA 11..167 157..320 192 31.1 Plus
Dmoj\GI11094-PA 320 GI11094-PA 163..320 3..160 176 30.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:53:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15887-PA 512 GL15887-PA 195..512 5..322 1603 93.1 Plus
Dper\GL11940-PA 324 GL11940-PA 7..323 2..317 924 58.4 Plus
Dper\GL12917-PA 335 GL12917-PA 7..333 7..317 734 45.6 Plus
Dper\GL11940-PA 324 GL11940-PA 11..167 157..320 190 31.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 08:53:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22156-PA 505 GA22156-PA 188..505 5..322 1599 93.1 Plus
Dpse\GA19090-PA 324 GA19090-PA 7..323 2..317 924 58.4 Plus
Dpse\AnnX-PA 320 GA22806-PA 7..318 7..317 780 48.1 Plus
Dpse\GA19090-PA 324 GA19090-PA 11..167 157..320 190 31.1 Plus
Dpse\AnnX-PA 320 GA22806-PA 163..320 5..160 163 30.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 08:53:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13401-PA 322 GM13401-PA 1..322 1..322 1717 99.7 Plus
Dsec\GM15061-PA 304 GM15061-PA 7..302 2..316 777 52.2 Plus
Dsec\GM22687-PA 320 GM22687-PA 6..318 6..317 775 48.2 Plus
Dsec\GM15061-PA 304 GM15061-PA 173..303 31..158 196 32.8 Plus
Dsec\GM22687-PA 320 GM22687-PA 188..320 31..160 168 31.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:53:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15750-PA 322 GD15750-PA 1..322 1..322 1725 100 Plus
Dsim\GD19393-PA 341 GD19393-PA 7..323 2..317 925 58.7 Plus
Dsim\GD22929-PA 320 GD22929-PA 6..318 6..317 781 48.2 Plus
Dsim\GD19393-PA 341 GD19393-PA 11..167 157..320 188 31.1 Plus
Dsim\GD22929-PA 320 GD22929-PA 188..320 31..160 173 30.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 08:53:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19360-PA 505 GJ19360-PA 185..505 2..322 1575 91 Plus
Dvir\GJ11008-PA 324 GJ11008-PA 7..323 2..317 906 58.4 Plus
Dvir\GJ15779-PA 320 GJ15779-PA 5..318 5..317 765 48.1 Plus
Dvir\GJ11008-PA 324 GJ11008-PA 11..167 157..320 188 30.5 Plus
Dvir\GJ15779-PA 320 GJ15779-PA 14..163 169..322 171 29.2 Plus
Dvir\GJ15779-PA 320 GJ15779-PA 188..320 31..160 158 29.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:53:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25708-PA 672 GK25708-PA 355..672 5..322 1614 93.4 Plus
Dwil\GK14180-PA 324 GK14180-PA 7..323 2..317 922 58.7 Plus
Dwil\GK25596-PA 320 GK25596-PA 15..318 15..317 766 49.3 Plus
Dwil\GK14180-PA 324 GK14180-PA 11..167 157..320 186 30.5 Plus
Dwil\GK25596-PA 320 GK25596-PA 32..163 188..322 171 31.9 Plus
Dwil\GK25596-PA 320 GK25596-PA 169..320 14..160 161 31.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:53:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15970-PA 505 GE15970-PA 187..505 4..322 1696 98.4 Plus
Dyak\GE15364-PA 320 GE15364-PA 6..318 6..317 762 47.9 Plus
Dyak\GE15364-PA 320 GE15364-PA 188..320 31..160 174 30.8 Plus