BDGP Sequence Production Resources |
Search the DGRC for GM14014
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 140 |
Well: | 14 |
Vector: | pOT2 |
Associated Gene/Transcript | spoon-RA |
Protein status: | GM14014.pep: gold |
Preliminary Size: | 3459 |
Sequenced Size: | 3334 |
Gene | Date | Evidence |
---|---|---|
CG3249 | 2001-07-04 | Blastp of sequenced clone |
CG3249 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3249 | 2008-04-29 | Release 5.5 accounting |
CG3249 | 2008-08-15 | Release 5.9 accounting |
yu | 2008-12-18 | 5.12 accounting |
3334 bp (3334 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051641
> GM14014.complete CCGTGCACACGTTTTTCGGCTTTCTAGAAATAATTGGGCTGCGATTCAAA CTGTGAAGTGATTTTTTCTATATTTTTTTTTGTGTGCACAAAGGCTCTTG TAATTCGAGGATTTGGCCATCGCGAGTGCGGGTGATTAAGCAGGCAGCTC CGATTGTCAGAGTTTTGCGGATGCATGGCAACACTGCCGCACGCCGGCCA TGTTATTGTGATTTGTAAAAGGTGGAACGTAGACACGTGTTTAATTCGTG CAGCACTTTAGCGTTGAGAAAACGACAGTAAATCGCCAGCAAATAAGCAA AAACAATACACAACTCGCGTGTGCAGTAGATAGCTTTGAAAGCACCCAAA GATAGTGAGCAAAATAAGTTACCCAAGCGGTTCACAAAGATCTTTCAATA TTCAGCGAAAATGGTATCCGGTCGTCCTCTACTCTACCTCTCACTGCCCG GTGTAGCATTTATACTCGGCGTCTTTTGGTTTCGGCGTAGATATAAAAAT TGTTTAGACAAGCCCGACGACGAGGACTCATCGGCCATCAATGACTCGTC GATTGAACCAACTGTGCAGGCGCGCAAGGCCAACGGAGTCCTGCAGAATG GCAAGCTGCCACAGCAGTCGGCCAGCAAGTCGATGAACATCAACGGAACT TTAGTTAACGGTAGCGGAAGCGGTAGCGGAAGTAGCAGTGATGAGAAGGA CAGCCCCACTACCATGTTGTATGGTAAATCAGCACCAATCAAAATCCAGA GCAATGGACGCACTTCAAATGGCAAGCATCAGCAGCAGATCGATTCCGAA ATACTGAAGTCAAAGATACAGGATGCCGAACACAAGACACTCTGCTCCAT AGACGAGGATTTCGAGAATCTATCGTCGCCACGTGATTTACCCGATTCGG TAAATACACGCGTATCCTTCTACAATCGTAAGGCTACCCAAAAGACGGTG GAACCGGTGGTGATTAAGGCCACGCGCACACCCAAAATATCGCCAGAGAA CTCCTTCCTGGATACCAACTACACCAACAAGGAGTGCGAGCAGAACAACA ACTGTGAGCCCAAGGAGGAGCCCTCCAAGAAGGAGGCCGATCAGGAGGAG CTCGAGCAGGATCAGGAGCAGACGGTGCTGAAGGAGGAAGTGGTGGATAG CAATGGTAATCAGAAGCGCAATGTGGATGCGGCCAGTCCATCGCTGAGCA TTTGCAGTGTGCAATCGGGCGATTCTGGCAAGGGATCCAGCTTGCCGCGC TCGGAGGCGACACGCGTGAAAACCACCTACGAGTTCCTCTTCCCGATCAG CTTGATTGGTCACCTGTACGGCCGCAAGCGGGCGTTTATTAACCAAATCA AGGCCAAGACCCTGGCCAGCGTGTCTGTAGGCAAGAATCCCTACTCGGGC AAGGTGCGCATCTGTACCATTGAGGGAACGGAGAGCGAGATTGATGCCGC CCTGGCCATGATCCGTCAACGTTTGCCGGCCAAGCGCTATCCGAACTTCA CCATGCAACGCATCCACTTTGCGCTTCCCCAGACCATAGTTCCTCTTTCG ACCGAAAGCCTCTACAATCTACAACTGAAACTGATTGAGGGCATCAACAA CGATGTGGTAGTGAGTGCGGTGCTATCTGGGTCGCATATTTTCATCCAGC ACCCGCTGCATCCCTCGCATCCATCGTTGCCTTTGCTGCAGAAGCAGCTG TACGATAGCTACTCCACCATGGAGGCGCCATTGCTGCCCAGTTTGGAGCT TAGTGCCGTGTGCGTGATACCCATCAATGATGTGTGGTATCGCGTCCAGA TTGTCGACACAGATCCCGAGGACGAGGAGCGTTGCGTAATCAAGTTTCTT GACTTTGGTGGCTACATGAATGTCGGCTTCAACACACTGCGACAGATTCG CACCGATTTCATGAATGTGCCCTTCCAGTCCACCGAATGCATCCTGTCCA ACATTGAGCCCATCGGTGGCACCTGGTCCATTGAGGCGGCCGAAATCCTC AACAAACTTACCAAAGGCATTGTCTTGCAAGCACAAGTCGCCGGCTATAA TAGTCACAACCTACCAGAAATCTTTTTATTCGCATCCCTAGGTCCCAATA ATGTAATCTTTATCAATAAGGAGCTGGTCGGCAGAAAGCTCGCCAAATGG GTGGAGATGAGTGACTAACAGCCTTAGTGAACAACTCAACTAGCAACCAA GAACTATATGAAAACTTAAAAGCAAACTTAAACAACAATCACTCAAACCC AAATCAAGCAACTTGGCGGTGCAACAAAAAAGGAATGCTTGAGTATTGCG CAACAGGCTCCAAGATGCGGATTCGGATTAAGGATTTCGTTAGCAGCTTT TGCAGTTAGCATGTAGCATGTAGCACACAGCAAATAGCAATTGCCCGATT CCAAAAGAACTGGCAAGTGCAGAGGCCTCAAAACAAAGAAAATGAAACGT TTGTTACGTTGTTTAGATTGCGACTGAGCCCAGAGAGAGCCCCTTAATCA TTACATAACAAACAACACACACTCGCCAAATACACACACACACACACACA CACACACACGCATATATGAGTAAGAGCACCTAACACCACACTAACCCATA CACATTACACAACAAGACAAACGTTTGTTTGTTGACTGTCCAGAATTGGA TACCAAAATGGAGGGGGAAGTTAGGGATCAGCTGGGTTATGCGTTTTGTG ACCACATGGCAACACATGGGCGGGCGGGCATGCAACGGATCGACTGGAGC TGCAGATATTACTATACTCAGTTTATAAGTAGGCATTACTAAATAATGTA CATAGATTTTATAACGAGAACGAGATGCGAAAAAAAAACAAAGAACATAC TAAATAGACCCAACTAAAATACCATGCGTTCATCAGATATACAGAAAAAC AGAAACACAGAAACATAGAAACTCTGGATAAGAATGGAGAAAAACCTGAC AAAACTTTAGTTTTATGCTGCTATTTGCTGAGATCTGTAAATATTATATT AGGCCTTTTTAAACAACTGATAATATCTAATCGACGAGTTCATACATTTA CATGCATTATACATTTTTTTTTTTTTGTTAATTTGTATTCAAACTGTAAT CAGAAAATGTATTCAAAATTCCCAACCCAAAAATAACTCACACCCGCACT AAAGCCACAGAATGCCTAACAAAGAAAGAAACCATTTAAAAGCAGAGACA GAGTGACGTTACGAATTCTTCATAATTATATATGCGTGTGTGCCATTGTT AGACAACAAACCAACATTAAACATAACCAACATAACAAGCAAAACAACAA ACACAATAATTAACAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 5306407..5307621 | 3314..2100 | 6075 | 100 | Minus |
chrX | 22417052 | chrX | 5308766..5309956 | 1578..388 | 5940 | 99.9 | Minus |
chrX | 22417052 | chrX | 5308105..5308498 | 1968..1575 | 1970 | 100 | Minus |
chrX | 22417052 | chrX | 5313040..5313429 | 389..1 | 1900 | 99.7 | Minus |
chrX | 22417052 | chrX | 5307902..5308036 | 2099..1965 | 675 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 5413807..5415041 | 3334..2100 | 6160 | 99.9 | Minus |
X | 23542271 | X | 5416186..5417376 | 1578..388 | 5940 | 99.9 | Minus |
X | 23542271 | X | 5415525..5415918 | 1968..1575 | 1970 | 100 | Minus |
X | 23542271 | X | 5420452..5420841 | 389..1 | 1885 | 99.5 | Minus |
X | 23542271 | X | 5415322..5415456 | 2099..1965 | 675 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 5421905..5423139 | 3334..2100 | 6160 | 99.9 | Minus |
X | 23527363 | X | 5424284..5425474 | 1578..388 | 5940 | 99.9 | Minus |
X | 23527363 | X | 5423623..5424016 | 1968..1575 | 1970 | 100 | Minus |
X | 23527363 | X | 5428550..5428939 | 389..1 | 1895 | 99.4 | Minus |
X | 23527363 | X | 5423420..5423554 | 2099..1965 | 675 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Porto1 | 4682 | Porto1 DOC5 4682bp | 4361..4451 | 2866..2954 | 117 | 60.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 5306470..5307621 | 2100..3251 | 95 | <- | Minus |
chrX | 5307902..5308035 | 1966..2099 | 100 | <- | Minus |
chrX | 5308108..5308498 | 1575..1965 | 100 | <- | Minus |
chrX | 5308770..5309954 | 390..1574 | 100 | <- | Minus |
chrX | 5313040..5313429 | 1..389 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yu-RC | 46..1824 | 390..2168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yu-RC | 46..1824 | 390..2168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spoon-RC | 46..1824 | 390..2168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3249-RC | 46..1824 | 390..2168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spoon-RC | 46..1824 | 390..2168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yu-RA | 23..3337 | 1..3314 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yu-RA | 23..3337 | 1..3314 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spoon-RA | 27..3341 | 1..3314 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3249-RA | 23..3337 | 1..3314 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spoon-RA | 27..3341 | 1..3314 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5413827..5415041 | 2100..3314 | 100 | <- | Minus |
X | 5415322..5415455 | 1966..2099 | 100 | <- | Minus |
X | 5415528..5415918 | 1575..1965 | 100 | <- | Minus |
X | 5416190..5417374 | 390..1574 | 100 | <- | Minus |
X | 5420452..5420841 | 1..389 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5413827..5415041 | 2100..3314 | 100 | <- | Minus |
X | 5415322..5415455 | 1966..2099 | 100 | <- | Minus |
X | 5415528..5415918 | 1575..1965 | 100 | <- | Minus |
X | 5416190..5417374 | 390..1574 | 100 | <- | Minus |
X | 5420452..5420841 | 1..389 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5413827..5415041 | 2100..3314 | 100 | <- | Minus |
X | 5415322..5415455 | 1966..2099 | 100 | <- | Minus |
X | 5415528..5415918 | 1575..1965 | 100 | <- | Minus |
X | 5416190..5417374 | 390..1574 | 100 | <- | Minus |
X | 5420452..5420841 | 1..389 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 5307860..5309074 | 2100..3314 | 100 | <- | Minus |
arm_X | 5309355..5309488 | 1966..2099 | 100 | <- | Minus |
arm_X | 5309561..5309951 | 1575..1965 | 100 | <- | Minus |
arm_X | 5310223..5311407 | 390..1574 | 100 | <- | Minus |
arm_X | 5314485..5314874 | 1..389 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5421925..5423139 | 2100..3314 | 100 | <- | Minus |
X | 5423420..5423553 | 1966..2099 | 100 | <- | Minus |
X | 5423626..5424016 | 1575..1965 | 100 | <- | Minus |
X | 5424288..5425472 | 390..1574 | 100 | <- | Minus |
X | 5428550..5428939 | 1..389 | 99 | Minus |
Translation from 410 to 2167
> GM14014.pep MVSGRPLLYLSLPGVAFILGVFWFRRRYKNCLDKPDDEDSSAINDSSIEP TVQARKANGVLQNGKLPQQSASKSMNINGTLVNGSGSGSGSSSDEKDSPT TMLYGKSAPIKIQSNGRTSNGKHQQQIDSEILKSKIQDAEHKTLCSIDED FENLSSPRDLPDSVNTRVSFYNRKATQKTVEPVVIKATRTPKISPENSFL DTNYTNKECEQNNNCEPKEEPSKKEADQEELEQDQEQTVLKEEVVDSNGN QKRNVDAASPSLSICSVQSGDSGKGSSLPRSEATRVKTTYEFLFPISLIG HLYGRKRAFINQIKAKTLASVSVGKNPYSGKVRICTIEGTESEIDAALAM IRQRLPAKRYPNFTMQRIHFALPQTIVPLSTESLYNLQLKLIEGINNDVV VSAVLSGSHIFIQHPLHPSHPSLPLLQKQLYDSYSTMEAPLLPSLELSAV CVIPINDVWYRVQIVDTDPEDEERCVIKFLDFGGYMNVGFNTLRQIRTDF MNVPFQSTECILSNIEPIGGTWSIEAAEILNKLTKGIVLQAQVAGYNSHN LPEIFLFASLGPNNVIFINKELVGRKLAKWVEMSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20944-PA | 610 | GF20944-PA | 1..610 | 1..585 | 2449 | 80 | Plus |
Dana\GF14610-PA | 578 | GF14610-PA | 140..426 | 291..546 | 170 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18497-PA | 588 | GG18497-PA | 1..588 | 1..585 | 2860 | 92.7 | Plus |
Dere\GG24838-PA | 577 | GG24838-PA | 140..426 | 291..546 | 183 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24358-PA | 627 | GH24358-PA | 1..627 | 1..585 | 2189 | 70.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spoon-PA | 585 | CG3249-PA | 1..585 | 1..585 | 3008 | 100 | Plus |
spoon-PE | 585 | CG3249-PE | 1..585 | 1..585 | 3008 | 100 | Plus |
spoon-PD | 585 | CG3249-PD | 1..585 | 1..585 | 3008 | 100 | Plus |
spoon-PC | 607 | CG3249-PC | 23..607 | 1..585 | 3008 | 100 | Plus |
papi-PD | 576 | CG7082-PD | 140..425 | 291..546 | 185 | 25.8 | Plus |
papi-PB | 576 | CG7082-PB | 140..425 | 291..546 | 185 | 25.8 | Plus |
papi-PC | 576 | CG7082-PC | 140..425 | 291..546 | 185 | 25.8 | Plus |
papi-PA | 576 | CG7082-PA | 140..425 | 291..546 | 185 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11050-PA | 681 | GI11050-PA | 341..681 | 248..585 | 1515 | 80.9 | Plus |
Dmoj\GI11050-PA | 681 | GI11050-PA | 1..258 | 1..245 | 767 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14640-PA | 605 | GL14640-PA | 1..605 | 1..585 | 2403 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28855-PA | 605 | GA28855-PA | 1..605 | 1..585 | 2406 | 76.4 | Plus |
Dpse\GA28909-PA | 161 | GA28909-PA | 1..161 | 425..585 | 738 | 80.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12645-PA | 573 | GM12645-PA | 1..573 | 1..585 | 2733 | 90.5 | Plus |
Dsec\GM18322-PA | 576 | GM18322-PA | 140..425 | 291..546 | 194 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16260-PA | 593 | GD16260-PA | 1..593 | 1..585 | 3027 | 95.8 | Plus |
Dsim\GD23138-PA | 576 | GD23138-PA | 140..425 | 291..546 | 191 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14809-PA | 655 | GJ14809-PA | 1..655 | 1..585 | 2230 | 68.4 | Plus |
Dvir\GJ17491-PA | 579 | GJ17491-PA | 143..427 | 291..546 | 160 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25472-PA | 595 | GK25472-PA | 1..595 | 1..585 | 2351 | 77.6 | Plus |
Translation from 410 to 2167
> GM14014.hyp MVSGRPLLYLSLPGVAFILGVFWFRRRYKNCLDKPDDEDSSAINDSSIEP TVQARKANGVLQNGKLPQQSASKSMNINGTLVNGSGSGSGSSSDEKDSPT TMLYGKSAPIKIQSNGRTSNGKHQQQIDSEILKSKIQDAEHKTLCSIDED FENLSSPRDLPDSVNTRVSFYNRKATQKTVEPVVIKATRTPKISPENSFL DTNYTNKECEQNNNCEPKEEPSKKEADQEELEQDQEQTVLKEEVVDSNGN QKRNVDAASPSLSICSVQSGDSGKGSSLPRSEATRVKTTYEFLFPISLIG HLYGRKRAFINQIKAKTLASVSVGKNPYSGKVRICTIEGTESEIDAALAM IRQRLPAKRYPNFTMQRIHFALPQTIVPLSTESLYNLQLKLIEGINNDVV VSAVLSGSHIFIQHPLHPSHPSLPLLQKQLYDSYSTMEAPLLPSLELSAV CVIPINDVWYRVQIVDTDPEDEERCVIKFLDFGGYMNVGFNTLRQIRTDF MNVPFQSTECILSNIEPIGGTWSIEAAEILNKLTKGIVLQAQVAGYNSHN LPEIFLFASLGPNNVIFINKELVGRKLAKWVEMSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spoon-PA | 585 | CG3249-PA | 1..585 | 1..585 | 3008 | 100 | Plus |
spoon-PE | 585 | CG3249-PE | 1..585 | 1..585 | 3008 | 100 | Plus |
spoon-PD | 585 | CG3249-PD | 1..585 | 1..585 | 3008 | 100 | Plus |
spoon-PC | 607 | CG3249-PC | 23..607 | 1..585 | 3008 | 100 | Plus |
papi-PD | 576 | CG7082-PD | 140..425 | 291..546 | 185 | 25.8 | Plus |