BDGP Sequence Production Resources |
Search the DGRC for GM14138
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 141 |
Well: | 38 |
Vector: | pOT2 |
Associated Gene/Transcript | CG17598-RA |
Protein status: | GM14138.pep: gold |
Preliminary Size: | 2747 |
Sequenced Size: | 2637 |
Gene | Date | Evidence |
---|---|---|
CG17598 | 2001-01-01 | Release 2 assignment |
CG17598 | 2001-12-12 | Blastp of sequenced clone |
CG17598 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17598 | 2008-04-29 | Release 5.5 accounting |
CG17598 | 2008-08-15 | Release 5.9 accounting |
CG17598 | 2008-12-18 | 5.12 accounting |
2637 bp (2637 high quality bases) assembled on 2001-12-12
GenBank Submission: AY070531
> GM14138.complete CGGAAAGTTGTCGCCGATCAAAACTCGCTTATTTCCACAGCCCAGTGCAC TTGATCGGAGACCGCACGTCGCCGTTAACATAAACCATCAACCCATATAG CGTATATAGCGTATTTCGAAAATCGAAGGGAATCAGGTGGAAGAAGGAGA AATACAACAACAAAGCAAGCTCGCCACGTCAGTGGGAGTGAGCGAGAGCG CAAACGAGTAGCGTACGGGAGTGAGCGAGAGACAAGAAAGCAAAATGTTT AGCAACTTTAAGGAGCGTATTATTTCGGCCATAGCGCCCGACTTGCCACC TCTGCCGGGCAACAGCGAGCGGGCTATTGGCTCTGGAAGCGGTCACCATC ACAGCTCGACGCACCAGCGACTCCGGTTCGGCGCTTCCGGCGGACAGCCA ATGCCGGACAAGTTCCCCTATGCCCGGCCGCCCTTTCTGCAGCTTCTCAC GCCGGACGAGCTGCGCGCCTCGGCGGACCACAATGTGCGGCCCATCATCG TGCCGCGGGACATCAACCTACTGCCCTGGGGCACCGGATACGCCGAATGC GTCAACTCCGGAAAATCCGAGTGGAACGAGGACCAGGGTGCCTTCTGCCG GCAAGTTCTTTCGGATCCGGAGCATAAACACCCAGATCTCCCGTACACAT ACTTCGGCATTTTCGACGGACACGCCGGTTATGGGGCCGCACTGGCCGCC TCGCATCAGTTTCATCACATCCTGCACGAGAAGCTAGTGGACTGCCTGGA GCTCCTCCTGCCACGGGATGCGGATGCCACGAATGGCGGCGGGGAAGGCA ACAAGCTGAATCCCACTTTCCCGCACCCCATTTACTTCCAGCGCCGGGTG ACTAAGGACGAACTAATCATCGGGGCGCTGGAGAGTGCCTTCTTCAACAT GGACTCGTTGATAGCGCAGGACTGTGATCGTTATCGAGATGCTGGGGGTT GCACCGCCTGCGTTTCATTGTTTATCGATGGCAAGATGTATGTGGCCAAT GCCGGCGACTCCAGAGCTGTGCTCTGCCAGCGGCGTGCCACCCCCGAGAG GCCACAAACAAATACTGACTCCGGGATTGAGCCGGATCCCTTAGAAGCTA GCTGTTATCCAGTGCCATTCTCGGCGGATCACACGCCTGAAACTGAGCGC GAACGCCTGCTGAATGTGGCCAGATTGAAGCCTCACCTCATGGGGAAGCA TTATGTGGCCATGGAGTACGCAAAGCGGCCGCATATCAAGGACATGGGCC AGCGCATTCTCTGCCGACAGGGCACCATGCGTGGCTGGACATACAAAACT TTGACCATGGAAGACCTCTGCATGCCGGTGGTCAATGGCGAGGGAAAAAG AAGTCGCTTGCTGGGTACGTTGGGGGTCACGCGCGGCTTTGGCGATCACG AGCTGCTAGCCATCAACACAGGTATTCAGATAAAACCATTTCTCACGCCT CACCCCGATGTCAGGCAGCGGGATCTGACACAGGTGGTTTCAATTCCGGA TGAGGACAACCGGGATGGCGACTACGGAGTGCTCGTCATGGCCACCGATG GCCTGTGGGATGTGTCCGAAAATGACGCCGTTTCACGCACCGTCTTCCAG ACGCTCTCCAAATATTCAACGGAGAAACATCGTTACACGATGGTCGCCCA GGAGCTGGTGGCCCGTGCTCGTGGCAAAATCAACGACTCCGGGCATTGGC GACTCGCAGATAGCAAGGCTGCAGCCACTGTTGATGACATCTCGGTGATT GTTATCCCGGTTTGCCAGTATTACAAAGAGCACGTGGAGTGGACGCAAAA CTACAAACGAGATCTCGAACATCGTCGCCGCCAGGCCCAGGCCCATATGG CGCAGGAAGCGGTCAACGTGCTCAATGGCGTGATTGCCGAGGAAGCTCAC GTGGTTGAAGAGGAAGAGGAAGGCGAAGTGGTTGTTCATGAGGCCAGGAC TTCTCACAATCAAACGAAAGTTCCAAGGCGGCTGGACGGGACACTCGACG AAACCCTGGTGGTAGAGCTGACCCCTTCACTGGAGCAAGTTCACATTCAG AACGCGGATTCAGCGGAAGGCGAATCCAGCAAGGAGAACGTTAATGATAA GGACAAAGAGGCGTCCACGACGAGACAGCAGTCACAGCAGCAGCAGCAAC AACAACAACAACAACAACAGAAGGGTCGCAAGGGCAAAGGCAAGCACTAG GACGAAGGTAATGCCACCCAGGCCGATACATTAGTCGTAATTAGACTAAG CAATATTCGAACGGATATGGATGCGGCTGAAATGGGCACATCTATATTTG TTTTTACACTCCACACGAAAGGACAAATTCAAAACATTCAAAGTTTACAT AATTTGCTTATGTACGCCCCCAAACAAACAAAACAGAAACGCATGTCAAC TTAATGAAACTGTACAATAATTTGCGGCAATGAAGTGTATTTATTTTATC CTAAAAGATTGAATGACGAACAAAGCCCAATAGTAACGGAGGCGATATTT TCAATAACGCAAATAAAAACCTTATGATTCCAAATGAAAGCATAAAAAGT AATTTAAGCTGCGTATAACATAAGCCAACTATTAATATAAAATATAATTA CAAATATTGTTAACTAAACTAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 21933222..21934688 | 2066..600 | 7335 | 100 | Minus |
chrX | 22417052 | chrX | 21935707..21936307 | 601..1 | 3005 | 100 | Minus |
chrX | 22417052 | chrX | 21932407..21932961 | 2620..2066 | 2775 | 100 | Minus |
chrX | 22417052 | chrX | 16790072..16790111 | 2134..2173 | 185 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 22537256..22538722 | 2066..600 | 7335 | 100 | Minus |
X | 23542271 | X | 22539741..22540341 | 601..1 | 3005 | 100 | Minus |
X | 23542271 | X | 22536439..22536995 | 2622..2066 | 2785 | 100 | Minus |
X | 23542271 | X | 16900442..16900481 | 2134..2173 | 185 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 22522348..22523814 | 2066..600 | 7335 | 100 | Minus |
X | 23527363 | X | 22524833..22525433 | 601..1 | 3005 | 100 | Minus |
X | 23527363 | X | 22521531..22522087 | 2622..2066 | 2785 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6745..6830 | 2125..2207 | 170 | 69.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6766..6826 | 2125..2187 | 166 | 76.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6787..6871 | 2125..2206 | 165 | 69.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6797 | 2126..2197 | 164 | 71.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2621..2665 | 2125..2169 | 162 | 84.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2624..2672 | 2125..2173 | 155 | 79.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6800..6847 | 2126..2173 | 150 | 79.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2489..2534 | 2125..2170 | 149 | 80.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2342..2423 | 2125..2206 | 148 | 67.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2337..2409 | 2126..2197 | 146 | 68.5 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3281..3357 | 2125..2195 | 145 | 71.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6827..6919 | 2116..2206 | 144 | 67.4 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1069..1120 | 2122..2173 | 143 | 75 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1031..1173 | 2032..2172 | 142 | 61.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2399..2442 | 2125..2168 | 139 | 79.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2444..2488 | 2125..2169 | 135 | 77.8 | Plus |
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 816..887 | 2097..2169 | 128 | 65.8 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 977..1245 | 2134..2385 | 125 | 54.4 | Plus |
hobo | 2959 | hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). | 2290..2400 | 2616..2497 | 119 | 60.8 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1547..1597 | 2125..2174 | 117 | 72.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 21933222..21934687 | 601..2066 | 100 | <- | Minus |
chrX | 21935708..21936307 | 1..600 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17598-RA | 1..1956 | 245..2200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17598-RA | 1..1956 | 245..2200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17598-RA | 1..1956 | 245..2200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17598-RA | 1..1956 | 245..2200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17598-RA | 1..1956 | 245..2200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17598-RA | 1..2620 | 1..2620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17598-RA | 23..2642 | 1..2620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17598-RA | 43..2662 | 1..2620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17598-RA | 1..2620 | 1..2620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17598-RA | 43..2662 | 1..2620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22536441..22536994 | 2067..2620 | 100 | <- | Minus |
X | 22537256..22538721 | 601..2066 | 100 | <- | Minus |
X | 22539742..22540341 | 1..600 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22536441..22536994 | 2067..2620 | 100 | <- | Minus |
X | 22537256..22538721 | 601..2066 | 100 | <- | Minus |
X | 22539742..22540341 | 1..600 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22536441..22536994 | 2067..2620 | 100 | <- | Minus |
X | 22537256..22538721 | 601..2066 | 100 | <- | Minus |
X | 22539742..22540341 | 1..600 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 21938277..21938830 | 2067..2620 | 100 | <- | Minus |
arm_X | 21939092..21940557 | 601..2066 | 100 | <- | Minus |
arm_X | 21941578..21942177 | 1..600 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22521533..22522086 | 2067..2620 | 100 | <- | Minus |
X | 22522348..22523813 | 601..2066 | 100 | <- | Minus |
X | 22524834..22525433 | 1..600 | 100 | Minus |
Translation from 244 to 2199
> GM14138.hyp MFSNFKERIISAIAPDLPPLPGNSERAIGSGSGHHHSSTHQRLRFGASGG QPMPDKFPYARPPFLQLLTPDELRASADHNVRPIIVPRDINLLPWGTGYA ECVNSGKSEWNEDQGAFCRQVLSDPEHKHPDLPYTYFGIFDGHAGYGAAL AASHQFHHILHEKLVDCLELLLPRDADATNGGGEGNKLNPTFPHPIYFQR RVTKDELIIGALESAFFNMDSLIAQDCDRYRDAGGCTACVSLFIDGKMYV ANAGDSRAVLCQRRATPERPQTNTDSGIEPDPLEASCYPVPFSADHTPET ERERLLNVARLKPHLMGKHYVAMEYAKRPHIKDMGQRILCRQGTMRGWTY KTLTMEDLCMPVVNGEGKRSRLLGTLGVTRGFGDHELLAINTGIQIKPFL TPHPDVRQRDLTQVVSIPDEDNRDGDYGVLVMATDGLWDVSENDAVSRTV FQTLSKYSTEKHRYTMVAQELVARARGKINDSGHWRLADSKAAATVDDIS VIVIPVCQYYKEHVEWTQNYKRDLEHRRRQAQAHMAQEAVNVLNGVIAEE AHVVEEEEEGEVVVHEARTSHNQTKVPRRLDGTLDETLVVELTPSLEQVH IQNADSAEGESSKENVNDKDKEASTTRQQSQQQQQQQQQQQQKGRKGKGK H*
Translation from 244 to 2199
> GM14138.pep MFSNFKERIISAIAPDLPPLPGNSERAIGSGSGHHHSSTHQRLRFGASGG QPMPDKFPYARPPFLQLLTPDELRASADHNVRPIIVPRDINLLPWGTGYA ECVNSGKSEWNEDQGAFCRQVLSDPEHKHPDLPYTYFGIFDGHAGYGAAL AASHQFHHILHEKLVDCLELLLPRDADATNGGGEGNKLNPTFPHPIYFQR RVTKDELIIGALESAFFNMDSLIAQDCDRYRDAGGCTACVSLFIDGKMYV ANAGDSRAVLCQRRATPERPQTNTDSGIEPDPLEASCYPVPFSADHTPET ERERLLNVARLKPHLMGKHYVAMEYAKRPHIKDMGQRILCRQGTMRGWTY KTLTMEDLCMPVVNGEGKRSRLLGTLGVTRGFGDHELLAINTGIQIKPFL TPHPDVRQRDLTQVVSIPDEDNRDGDYGVLVMATDGLWDVSENDAVSRTV FQTLSKYSTEKHRYTMVAQELVARARGKINDSGHWRLADSKAAATVDDIS VIVIPVCQYYKEHVEWTQNYKRDLEHRRRQAQAHMAQEAVNVLNGVIAEE AHVVEEEEEGEVVVHEARTSHNQTKVPRRLDGTLDETLVVELTPSLEQVH IQNADSAEGESSKENVNDKDKEASTTRQQSQQQQQQQQQQQQKGRKGKGK H*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21269-PA | 645 | GF21269-PA | 1..645 | 1..651 | 2744 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17512-PA | 643 | GG17512-PA | 1..620 | 1..623 | 3075 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24893-PA | 656 | GH24893-PA | 1..653 | 1..649 | 2287 | 68.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17598-PB | 651 | CG17598-PB | 1..651 | 1..651 | 3460 | 100 | Plus |
CG17598-PA | 651 | CG17598-PA | 1..651 | 1..651 | 3460 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14288-PA | 635 | GI14288-PA | 1..634 | 1..646 | 2240 | 65.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13426-PA | 541 | GL13426-PA | 69..541 | 170..651 | 1724 | 75.6 | Plus |
Dper\GL13426-PA | 541 | GL13426-PA | 1..82 | 1..97 | 359 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14572-PA | 630 | GA14572-PA | 1..630 | 1..651 | 2584 | 80.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11721-PA | 637 | GM11721-PA | 1..637 | 1..651 | 3278 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15484-PA | 638 | GD15484-PA | 1..638 | 1..651 | 3315 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19346-PA | 648 | GJ19346-PA | 1..548 | 1..556 | 2479 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25159-PA | 652 | GK25159-PA | 1..652 | 1..649 | 2404 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15267-PA | 643 | GE15267-PA | 1..643 | 1..651 | 3144 | 93.4 | Plus |