Clone GM14334 Report

Search the DGRC for GM14334

Clone and Library Details

Library:GM
Tissue Source:Drosophila melanogaster ovary
Created by:Ling Hong
Date Registered:1997-11-24
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:143
Well:34
Vector:pOT2
Associated Gene/TranscriptAats-asp-RA
Protein status:GM14334.pep: gold
Preliminary Size:2200
Sequenced Size:1972

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3821 2001-01-01 Release 2 assignment
CG3821 2001-12-12 Blastp of sequenced clone
CG3821 2003-01-01 Sim4 clustering to Release 3
Aats-asp 2008-04-29 Release 5.5 accounting
Aats-asp 2008-08-15 Release 5.9 accounting
Aats-asp 2008-12-18 5.12 accounting

Clone Sequence Records

GM14334.complete Sequence

1972 bp (1972 high quality bases) assembled on 2001-12-12

GenBank Submission: AY070532

> GM14334.complete
CAATAGTACACGACGCTCGTGAAATCAATTCGTTTGTGTATTAAAAGGGC
AAGATCTAGCTGCCGTTTTTGTGCATTCCAAGATGGTCGAGGACAAAGAG
CAAGTGGCCAACGGGGAGCAGGTCTCCAAGAAGGGAGCCAAAAAGCTGGC
CAAGGCCGCTAAGAAAGCCGAACAAAAAGCGGAGAACGCCTCCACCGCGG
CGGCCAATAACGCTGGTGGCGATTCTGCGGAGGATCACGCCGCCGGAAGA
TATGGCCTCTCGGAAATGATCCAATCCAAGGACAAACGCAGTGAACGCAA
CTTTGTCCCGGTTTCGGAACTAAGCGGTCAGGTGGGCAAAGGGCTGGTCT
GGGTGCGAGGACGCGTCCACACTTCGAGAGCCAAGGGAAAGCAGTGCTTC
CTCATCCTGCGCCAGCAGAGCAGCACGGTGCAGTGCATCCTGGCTGTCGG
TGATGTTATCTCCAAACAGATGGTCAAATTTGCGGGAAATATCCCTAAGG
AGAGCATTATTGATATCCAGGCCAAGCCAGTGGCGGTGTCTAGCAAGATT
GAATCCTGCACAGAGCAGTCGCTGGAATTGTCCGTCGAGCAGATATTCGT
AATATCCCAGGCCAAGGCACAGTTGCCATTGCAAATCGAGGATGCATCGC
GTCCCGAGAACGCCGATGATGCGGAAGGTCTGAATATTCGCGTGAACCAG
GACACGCGCTTGGACAACCGAGTGCTCGACCTGAGGACCCCGGCAAATCA
GGCCATTTTCCGACTGGAAGCCGGAGTATGTCGCCTGTTCCGCGATATTC
TCACTGAGCAGGGCTTCACAGAGATTCACACGCCGAAGATCATTTCAGCG
GCCAGTGAGGGAGGCGCCAATGTGTTCACCGTGAGCTACTTCAAGGATTC
AGCCTATCTGGCGCAGTCGCCGCAGCTGTACAAGCAGATGGCCATCGCCG
CCGATTTTGACAAGGTCTATACCGTAGGAGCCGTGTTCCGTGCAGAGGAT
TCGAACACTCATCGGCATTTGACCGAGTTCGTAGGCCTTGATCTGGAAAT
GGCCTTTAAGTACCACTACCACGAGGTGCTGCACACGATTGGCAACACGT
TTACGTCCATTTTCAAGGGACTGCGTGATAAGTACGCTAAGGAAATCGAA
TCTGTAGGCCAGCAGTACAAGGTGGATGCCTTCAAGTTCCTGGAGCCACC
ACTGATCCTCCAGTTCGCCGATGGCGTGGCCATGTTGCGCGAGGCTGGTG
TGGAGACCGGCGACGAGGAGGATCTGTCTACGCCCAACGAAAAGCTGTTG
GGTCGCCTGGTCAAGGCCAAGTACGACACTGACTTCTACATCCTTGACAA
GTTCCCGTTAGCGATACGGCCCTTCTACACGATGCCTGATCCAAACAATC
CGGTCTACTCCAACTCTTACGATATGTTCATGCGCGGCGAGGAGATCCTG
TCCGGCGCGCAGCGTATCCACGATCCCGAGTACTTAATCGAACGAGCCAA
GCACCATGGCATTGATACCTCCAAGATTGCGGCGTACATCGAGTCCTTCC
GCTATGGATGTCCTCCACATGCTGGTGGTGGCATTGGAATGGAGCGTGTG
GTGATGCTGTATCTGGGATTGGACAACATCCGCAAGACTTCCATGTTCCC
GCGCGATCCCAAACGATTAACGCCTTAAGCACGATAGACTCAAACAACGT
ACTCTTTAGATTTGAATACAATTCGATGAAACAATTGTTTTACTTTCCCT
GTGACTTTCCAAGCATTCAGTTCTTTTTATTTTTACGCCAAACCCAATCG
TGAGTGTTTTATCCTTCTTCTCAAGACTAACATGCTGCAAAGTTGTTAAA
CAACGAGAAAAATGTACGGGAAGACTGCCTAGAGTCAAATTTATTTGGAA
ACTCGTAAGAAATAAATACTTGCGCGTATGTTTTGTACTTTAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA

GM14334.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:49:05
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-asp.c 2373 Aats-asp.c 146..2088 1..1943 9700 99.9 Plus
Aats-asp.b 2840 Aats-asp.b 146..2088 1..1943 9700 99.9 Plus
Aats-asp-RA 2171 Aats-asp-RA 146..2088 1..1943 9700 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:20:50
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 8768800..8769824 490..1514 5125 100 Plus
chr2R 21145070 chr2R 8770033..8770460 1514..1941 2140 100 Plus
chr2R 21145070 chr2R 8768240..8768567 162..489 1640 100 Plus
chr2R 21145070 chr2R 8768061..8768162 62..163 510 100 Plus
chr2R 21145070 chr2R 8767611..8767672 1..62 310 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:23:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:20:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12881508..12882532 490..1514 5125 100 Plus
2R 25286936 2R 12882741..12883170 1514..1943 2150 100 Plus
2R 25286936 2R 12880948..12881275 162..489 1625 99.7 Plus
2R 25286936 2R 12880769..12880870 62..163 510 100 Plus
2R 25286936 2R 12880319..12880380 1..62 310 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:15:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 12882707..12883731 490..1514 5125 100 Plus
2R 25260384 2R 12883940..12884369 1514..1943 2150 100 Plus
2R 25260384 2R 12882147..12882474 162..489 1625 99.6 Plus
2R 25260384 2R 12881968..12882069 62..163 510 100 Plus
2R 25260384 2R 12881518..12881579 1..62 310 100 Plus
Blast to na_te.dros performed on 2019-03-15 15:20:48 has no hits.

GM14334.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:21:34 Download gff for GM14334.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 8767611..8767672 1..62 100 -> Plus
chr2R 8768062..8768162 63..163 100 -> Plus
chr2R 8768242..8768567 164..489 100 -> Plus
chr2R 8768800..8769824 490..1514 100 -> Plus
chr2R 8770034..8770460 1515..1941 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:08:38 Download gff for GM14334.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 1..1596 83..1678 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:17:46 Download gff for GM14334.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 1..1596 83..1678 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:25:02 Download gff for GM14334.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 1..1596 83..1678 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:43:52 Download gff for GM14334.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 1..1596 83..1678 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:03:12 Download gff for GM14334.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 1..1596 83..1678 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:50:31 Download gff for GM14334.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 1..1941 1..1941 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:17:45 Download gff for GM14334.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 1..1941 1..1941 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:25:02 Download gff for GM14334.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 36..1976 1..1941 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:43:52 Download gff for GM14334.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 1..1941 1..1941 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:03:12 Download gff for GM14334.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 36..1976 1..1941 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:21:34 Download gff for GM14334.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12880950..12881275 164..489 99 -> Plus
2R 12880319..12880380 1..62 100 -> Plus
2R 12880770..12880870 63..163 100 -> Plus
2R 12881508..12882532 490..1514 100 -> Plus
2R 12882742..12883168 1515..1941 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:21:34 Download gff for GM14334.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12880950..12881275 164..489 99 -> Plus
2R 12880319..12880380 1..62 100 -> Plus
2R 12880770..12880870 63..163 100 -> Plus
2R 12881508..12882532 490..1514 100 -> Plus
2R 12882742..12883168 1515..1941 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:21:34 Download gff for GM14334.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12880950..12881275 164..489 99 -> Plus
2R 12880319..12880380 1..62 100 -> Plus
2R 12880770..12880870 63..163 100 -> Plus
2R 12881508..12882532 490..1514 100 -> Plus
2R 12882742..12883168 1515..1941 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:25:02 Download gff for GM14334.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8767824..8767885 1..62 100 -> Plus
arm_2R 8768275..8768375 63..163 100 -> Plus
arm_2R 8768455..8768780 164..489 99 -> Plus
arm_2R 8769013..8770037 490..1514 100 -> Plus
arm_2R 8770247..8770673 1515..1941 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:20:04 Download gff for GM14334.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12882149..12882474 164..489 99 -> Plus
2R 12882707..12883731 490..1514 100 -> Plus
2R 12883941..12884367 1515..1941 100   Plus
2R 12881518..12881579 1..62 100 -> Plus
2R 12881969..12882069 63..163 100 -> Plus

GM14334.pep Sequence

Translation from 82 to 1677

> GM14334.pep
MVEDKEQVANGEQVSKKGAKKLAKAAKKAEQKAENASTAAANNAGGDSAE
DHAAGRYGLSEMIQSKDKRSERNFVPVSELSGQVGKGLVWVRGRVHTSRA
KGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAGNIPKESIIDIQAKPV
AVSSKIESCTEQSLELSVEQIFVISQAKAQLPLQIEDASRPENADDAEGL
NIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHT
PKIISAASEGGANVFTVSYFKDSAYLAQSPQLYKQMAIAADFDKVYTVGA
VFRAEDSNTHRHLTEFVGLDLEMAFKYHYHEVLHTIGNTFTSIFKGLRDK
YAKEIESVGQQYKVDAFKFLEPPLILQFADGVAMLREAGVETGDEEDLST
PNEKLLGRLVKAKYDTDFYILDKFPLAIRPFYTMPDPNNPVYSNSYDMFM
RGEEILSGAQRIHDPEYLIERAKHHGIDTSKIAAYIESFRYGCPPHAGGG
IGMERVVMLYLGLDNIRKTSMFPRDPKRLTP*

GM14334.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:07:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12925-PA 530 GF12925-PA 1..530 1..531 2558 95.9 Plus
Dana\GF15206-PA 558 GF15206-PA 128..558 80..531 357 26.1 Plus
Dana\GF22422-PA 580 GF22422-PA 91..559 70..523 208 23.4 Plus
Dana\GF11428-PA 460 GF11428-PA 136..455 224..526 204 23.8 Plus
Dana\GF15370-PA 1132 GF15370-PA 411..708 10..325 193 25.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:07:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20342-PA 531 GG20342-PA 1..531 1..531 2800 97.9 Plus
Dere\GG21647-PA 558 GG21647-PA 84..558 15..531 345 24.8 Plus
Dere\GG20650-PA 460 GG20650-PA 75..455 150..526 247 25 Plus
Dere\GG22777-PA 1145 GG22777-PA 494..701 106..325 187 28.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:07:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21379-PA 533 GH21379-PA 1..533 1..531 2469 90.8 Plus
Dgri\GH13480-PA 558 GH13480-PA 57..558 3..531 397 27.2 Plus
Dgri\GH17710-PA 582 GH17710-PA 7..560 13..523 208 22.2 Plus
Dgri\GH13102-PA 1125 GH13102-PA 446..653 106..325 187 28.4 Plus
Dgri\GH22841-PA 460 GH22841-PA 136..455 224..526 181 23.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:19:43
Subject Length Description Subject Range Query Range Score Percent Strand
AspRS-PB 531 CG3821-PB 1..531 1..531 2713 100 Plus
AspRS-PC 531 CG3821-PC 1..531 1..531 2713 100 Plus
AspRS-PA 531 CG3821-PA 1..531 1..531 2713 100 Plus
AsnRS-PB 558 CG10687-PB 84..558 15..531 349 25 Plus
AsnRS-PA 558 CG10687-PA 84..558 15..531 349 25 Plus
AsnRS-m-PA 460 CG6796-PA 75..455 150..526 235 24.8 Plus
AspRS-m-PC 1082 CG31739-PC 336..642 10..325 182 26 Plus
AspRS-m-PB 1082 CG31739-PB 336..642 10..325 182 26 Plus
AspRS-m-PA 1082 CG31739-PA 336..642 10..325 182 26 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:07:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18555-PA 533 GI18555-PA 1..533 1..531 2535 91.9 Plus
Dmoj\GI17232-PA 558 GI17232-PA 84..558 15..531 364 25.4 Plus
Dmoj\GI21220-PA 460 GI21220-PA 29..455 91..526 219 23 Plus
Dmoj\GI14195-PA 1190 GI14195-PA 509..716 106..325 190 28.8 Plus
Dmoj\GI15452-PA 554 GI15452-PA 207..554 205..521 174 22.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:07:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17018-PA 533 GL17018-PA 1..533 1..531 2418 90.4 Plus
Dper\GL25284-PA 517 GL25284-PA 97..517 89..531 364 26.6 Plus
Dper\GL21125-PA 557 GL21125-PA 229..557 200..531 354 26.8 Plus
Dper\GL24844-PA 507 GL24844-PA 179..507 200..531 348 27.1 Plus
Dper\GL25269-PA 397 GL25269-PA 2..397 106..531 333 26.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:07:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17710-PA 530 GA17710-PA 1..530 1..531 2540 93.6 Plus
Dpse\GA10495-PA 557 GA10495-PA 137..557 89..531 358 25.8 Plus
Dpse\GA19868-PA 460 GA19868-PA 136..455 224..526 207 24.2 Plus
Dpse\GA11433-PA 584 GA11433-PA 208..557 205..523 205 23 Plus
Dpse\GA23745-PA 225 GA23745-PA 68..200 191..325 204 33.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:07:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21429-PA 531 GM21429-PA 1..531 1..531 2816 98.9 Plus
Dsec\GM17026-PA 558 GM17026-PA 84..558 15..531 356 25.1 Plus
Dsec\GM17213-PA 1088 GM17213-PA 493..970 106..526 258 25.4 Plus
Dsec\GM21746-PA 460 GM21746-PA 75..455 150..526 241 24.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:07:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10925-PA 531 GD10925-PA 1..531 1..531 2826 99.1 Plus
Dsim\GD21774-PA 558 GD21774-PA 84..558 15..531 354 25.1 Plus
Dsim\GD11238-PA 460 GD11238-PA 75..455 150..526 240 24.8 Plus
Dsim\GD24088-PA 887 GD24088-PA 493..700 106..325 192 28.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:07:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20350-PA 537 GJ20350-PA 60..537 54..531 2467 93.9 Plus
Dvir\GJ17991-PA 558 GJ17991-PA 138..558 89..531 355 25.9 Plus
Dvir\GJ20822-PA 460 GJ20822-PA 136..455 224..526 196 24.8 Plus
Dvir\GJ17510-PA 1132 GJ17510-PA 442..649 106..325 192 28.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:07:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20765-PA 534 GK20765-PA 1..534 1..531 2492 91 Plus
Dwil\GK20764-PA 533 GK20764-PA 1..533 1..531 2192 80.7 Plus
Dwil\GK17133-PA 548 GK17133-PA 121..548 82..531 355 26.5 Plus
Dwil\GK24233-PA 558 GK24233-PA 86..558 17..531 343 24.1 Plus
Dwil\GK19574-PA 459 GK19574-PA 135..454 224..526 223 26.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:07:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\Aats-asp-PA 531 GE12500-PA 1..531 1..531 2804 98.1 Plus
Dyak\GE12667-PA 558 GE12667-PA 84..558 15..531 341 24.4 Plus
Dyak\GE11636-PA 460 GE11636-PA 75..455 150..526 225 23.9 Plus
Dyak\GE12772-PA 1141 GE12772-PA 490..697 106..325 188 28.4 Plus

GM14334.hyp Sequence

Translation from 82 to 1677

> GM14334.hyp
MVEDKEQVANGEQVSKKGAKKLAKAAKKAEQKAENASTAAANNAGGDSAE
DHAAGRYGLSEMIQSKDKRSERNFVPVSELSGQVGKGLVWVRGRVHTSRA
KGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAGNIPKESIIDIQAKPV
AVSSKIESCTEQSLELSVEQIFVISQAKAQLPLQIEDASRPENADDAEGL
NIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHT
PKIISAASEGGANVFTVSYFKDSAYLAQSPQLYKQMAIAADFDKVYTVGA
VFRAEDSNTHRHLTEFVGLDLEMAFKYHYHEVLHTIGNTFTSIFKGLRDK
YAKEIESVGQQYKVDAFKFLEPPLILQFADGVAMLREAGVETGDEEDLST
PNEKLLGRLVKAKYDTDFYILDKFPLAIRPFYTMPDPNNPVYSNSYDMFM
RGEEILSGAQRIHDPEYLIERAKHHGIDTSKIAAYIESFRYGCPPHAGGG
IGMERVVMLYLGLDNIRKTSMFPRDPKRLTP*

GM14334.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:35:35
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-asp-PB 531 CG3821-PB 1..531 1..531 2713 100 Plus
Aats-asp-PC 531 CG3821-PC 1..531 1..531 2713 100 Plus
Aats-asp-PA 531 CG3821-PA 1..531 1..531 2713 100 Plus
Aats-asn-PB 558 CG10687-PB 84..558 15..531 349 25 Plus
Aats-asn-PA 558 CG10687-PA 84..558 15..531 349 25 Plus