Clone GM14337 Report

Search the DGRC for GM14337

Clone and Library Details

Library:GM
Tissue Source:Drosophila melanogaster ovary
Created by:Ling Hong
Date Registered:1997-11-24
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:143
Well:37
Vector:pOT2
Associated Gene/TranscriptCG31908-RA
Protein status:GM14337.pep: gold
Preliminary Size:2166
Sequenced Size:2029

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8761 2001-01-01 Release 2 assignment
CG31908 2001-11-09 Blastp of sequenced clone
CG31908 2003-01-01 Sim4 clustering to Release 3
CG31908 2008-04-29 Release 5.5 accounting
CG31908 2008-08-15 Release 5.9 accounting
CG31908 2008-12-18 5.12 accounting

Clone Sequence Records

GM14337.complete Sequence

2029 bp (2029 high quality bases) assembled on 2001-11-09

GenBank Submission: AY069287

> GM14337.complete
GGCGGCGGCCACACACTTCTTTTATTAATAAAGCGTTAAAAATAAATGGT
TAACAAGTGTGGCTATCAAAGGTGGGTGGGCCAAGTATCTTCTGGCGCAG
TGCTGGTTGGGCCAGTAAAGTGCAACCACTTTTCCAGTTCCCGTGCAAAC
GAACAAAACCTGTCACTTTTGCTGTGACCTGATAAGCAAGAAGAAGACTA
GCCCACGGAAAGCAACAACAACAACAACGAGAACGACATTAGCAGCAGGC
CAAATTGTTGCGTATTGTTTTTTGTTTTTTCAGTAGGGTTCTTGGGTGCG
AATTTCGTGAAAAAAGTGTGCTTGCCAACATACGCATAACTTATGTCTGA
TAAAAGTGCGAAGGAATCATGTATCAGTAAGAGTGCGAGCTGCAGCAGCA
GGCGCAAGAGAAGAAAGTGAGCGAAAACGCAACCGAAACCCGAAGTATAT
ATTCTAGCAGCAGTCGAGCAACGTGCTTTGTCGAACGATGTCCCATGGCG
AGGATGTGTTAGACAACTGGGAGGAAATCGACGAGGATGGGCTCTCTATG
ACTCTGCAAACAAAGCTGCAGACGAGCGACCCACCTGTCAACAAAATGAA
ATTGCTCCAACGGCCGCAGAGCGTACAGGAGTCCTCACAAATCCTGAGCA
GCGGCGATGGTGGCGGCGGTGGTGGAAACGGGGGCGGGAATCCCCCGCCA
CGGCAGATCACCATTGCCCGGAAGCCCCAAGTACCGCCAGCAGAGGTTGA
CTCATCTACCCAGCAGGAGCAACAGCAGCAGCCCGTCATGATGGTGCTGC
ACAAGACGACCAATGACTACGATGCGGCCACCTATTGCACGCCCACCAGC
AACCAGACCGTCAAGATACTGCGGCGGCCCGCCCAGGCGGAGGAGCGGCG
GGACATTAACGGAATGCGACCGAAGCAGCCCATCAAGACGCTCAAGCAGC
GAGAACAGGAGTACGCCGAGGCCAGGCTGCGCATCCTGGGCGCTGCCAAA
AACCCGGAGGATGACAAACCGGCCACTCCCATCACGCCAGCTGTCAATAG
CAGCAGTGTGGCTGTTTCGTCCGCGGCGCCGCCTGTCACTCCCCCCTCTG
CGATCAGCAACAACAACGTCATCAACAACAATAGTAGCCATCCAGGAGGC
GGAATGCACCGCTCGAGTTCGGCACCGAAAATGTCCCAAGTGACGCCGAT
GTATAATAACTACAACAGCTACTTCCCGGGACTGCACAATCAGCCTGGCC
TTAACTACTACTATCCGCATAACCCGCAACATCAGCATCAGCATCAGCAG
CAACAGCAGCAGCAGCCGTCGCAGCATTTCAATCAACGGTTGCCGCCGTA
CGGAGGCGGAGGATCGGGACTGGGCGGTGTTGGGATGCAAGCTCAGGCGC
CGCCCCAGTCGTCGCCCAATCCGCAGCAGAGCTGGTCACCTGTTGTGGGC
GGATCAGTGTCCGCCGCCCTCCTGCGCCAACAGTCGCTGCAGTCGCCACA
GCAGCACCAGCAGCAGCATCAGCAGCAGCACCAGCATCAGCAGCAGCATC
AGAATCATCAGGCGCAGCAGCTCGGCCAGCATCCGCATCCGTTCAACGAC
CTAGTCCTGCGCCTGCCCAAGGGTCCCTGTCCGAATGGCTCCATTGGCTT
TCAGATGCGCCGGTAACAGACTGCGGCAATGGAGCAAGTCCTGTCTATTT
CAATAACTTCTAATTTTCAACTTGGTACTTCGATTCCAAATGCATGTTTC
TACATATATATATATATAAAAATTAAAATCAAACGAAAAGCGCAACCCAC
GCGGCATTCTGAGATTCAATGTCGCCACAGATTTGCACTCAGGTTCGATG
TGGCGCGTTTTCGTTGATCTACCCACTGGCTAGACCCGAGGAGTATCCAC
AACTATCTTAAACAAATTTTATGACGGACTATGGTAGATATTTTGTAAAT
TTACAACTCACACCACAAAATTTTGTATAATGCATACTAATAAAACGAAA
CGGTAATTTTAAAAAAAAAAAAAAAAAAA

GM14337.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:56:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG31908-RA 2328 CG31908-RA 143..2156 1..2014 10070 100 Plus
CG31908.a 2043 CG31908.a 101..1871 244..2014 8855 100 Plus
CG31908-RB 1871 CG31908-RB 101..1871 244..2014 8855 100 Plus
CG31908.a 2043 CG31908.a 32..102 1..71 355 100 Plus
CG31908-RB 1871 CG31908-RB 32..102 1..71 355 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:52:50
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 7023884..7024873 2010..1021 4950 100 Minus
chr2L 23010047 chr2L 7025779..7026319 541..1 2705 100 Minus
chr2L 23010047 chr2L 7025211..7025691 1021..541 2405 100 Minus
chrX 22417052 chrX 10509826..10509886 1545..1485 185 86.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:23:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:52:47
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7024825..7025818 2014..1021 4970 100 Minus
2L 23513712 2L 7026724..7027264 541..1 2705 100 Minus
2L 23513712 2L 7026156..7026636 1021..541 2405 100 Minus
X 23542271 X 10618460..10618520 1545..1485 185 86.9 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:22:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7024825..7025818 2014..1021 4970 100 Minus
2L 23513712 2L 7026724..7027264 541..1 2705 100 Minus
2L 23513712 2L 7026156..7026636 1021..541 2405 100 Minus
Blast to na_te.dros performed 2019-03-16 09:52:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2590..2870 1263..1561 238 57.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2444..2543 1231..1330 148 63.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2638..2856 1103..1337 146 56.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6870..6917 1272..1316 134 79.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6744..6944 1103..1313 128 57.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6755..6929 719..893 125 56.7 Plus
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 837..911 753..828 125 64.5 Plus
Doc2-element 4789 Doc2-element DOC2 4789bp 559..620 203..262 116 67.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6700..6923 1015..1244 115 56 Plus

GM14337.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:53:59 Download gff for GM14337.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 7023884..7024873 1021..2010 100 <- Minus
chr2L 7025212..7025690 542..1020 100 <- Minus
chr2L 7025779..7026319 1..541 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:08:39 Download gff for GM14337.complete
Subject Subject Range Query Range Percent Splice Strand
CG31908-RB 1..1179 488..1666 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:28:31 Download gff for GM14337.complete
Subject Subject Range Query Range Percent Splice Strand
CG31908-RB 1..1179 488..1666 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:58:20 Download gff for GM14337.complete
Subject Subject Range Query Range Percent Splice Strand
CG31908-RA 1..1179 488..1666 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:56:06 Download gff for GM14337.complete
Subject Subject Range Query Range Percent Splice Strand
CG31908-RB 1..1179 488..1666 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:22:09 Download gff for GM14337.complete
Subject Subject Range Query Range Percent Splice Strand
CG31908-RA 1..1179 488..1666 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:05:43 Download gff for GM14337.complete
Subject Subject Range Query Range Percent Splice Strand
CG31908-RA 32..2041 1..2010 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:28:31 Download gff for GM14337.complete
Subject Subject Range Query Range Percent Splice Strand
CG31908-RA 32..2041 1..2010 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:58:20 Download gff for GM14337.complete
Subject Subject Range Query Range Percent Splice Strand
CG31908-RA 33..2042 1..2010 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:56:07 Download gff for GM14337.complete
Subject Subject Range Query Range Percent Splice Strand
CG31908-RA 32..2041 1..2010 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:22:09 Download gff for GM14337.complete
Subject Subject Range Query Range Percent Splice Strand
CG31908-RA 24..2033 1..2010 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:53:59 Download gff for GM14337.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7024829..7025818 1021..2010 100 <- Minus
2L 7026157..7026635 542..1020 100 <- Minus
2L 7026724..7027264 1..541 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:53:59 Download gff for GM14337.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7024829..7025818 1021..2010 100 <- Minus
2L 7026157..7026635 542..1020 100 <- Minus
2L 7026724..7027264 1..541 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:53:59 Download gff for GM14337.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7024829..7025818 1021..2010 100 <- Minus
2L 7026157..7026635 542..1020 100 <- Minus
2L 7026724..7027264 1..541 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:58:20 Download gff for GM14337.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7024829..7025818 1021..2010 100 <- Minus
arm_2L 7026157..7026635 542..1020 100 <- Minus
arm_2L 7026724..7027264 1..541 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:32:15 Download gff for GM14337.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7024829..7025818 1021..2010 100 <- Minus
2L 7026157..7026635 542..1020 100 <- Minus
2L 7026724..7027264 1..541 100   Minus

GM14337.pep Sequence

Translation from 487 to 1665

> GM14337.pep
MSHGEDVLDNWEEIDEDGLSMTLQTKLQTSDPPVNKMKLLQRPQSVQESS
QILSSGDGGGGGGNGGGNPPPRQITIARKPQVPPAEVDSSTQQEQQQQPV
MMVLHKTTNDYDAATYCTPTSNQTVKILRRPAQAEERRDINGMRPKQPIK
TLKQREQEYAEARLRILGAAKNPEDDKPATPITPAVNSSSVAVSSAAPPV
TPPSAISNNNVINNNSSHPGGGMHRSSSAPKMSQVTPMYNNYNSYFPGLH
NQPGLNYYYPHNPQHQHQHQQQQQQQPSQHFNQRLPPYGGGGSGLGGVGM
QAQAPPQSSPNPQQSWSPVVGGSVSAALLRQQSLQSPQQHQQQHQQQHQH
QQQHQNHQAQQLGQHPHPFNDLVLRLPKGPCPNGSIGFQMRR*

GM14337.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:39:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14945-PA 355 GF14945-PA 1..355 1..392 1102 70.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:39:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23556-PA 369 GG23556-PA 1..369 1..392 1240 83.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:39:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13635-PA 402 GH13635-PA 1..402 1..392 664 46 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:22:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG31908-PC 392 CG31908-PC 1..392 1..392 2104 100 Plus
CG31908-PB 392 CG31908-PB 1..392 1..392 2104 100 Plus
CG31908-PA 392 CG31908-PA 1..392 1..392 2104 100 Plus
Tlk-PG 1489 CG34412-PG 93..356 95..361 162 27.5 Plus
vvl-PC 713 CG10037-PC 439..695 132..382 161 26.4 Plus
vvl-PE 726 CG10037-PE 439..695 132..382 161 26.4 Plus
vvl-PF 742 CG10037-PF 439..695 132..382 161 26.4 Plus
CG43901-PC 2215 CG43901-PC 2092..2192 261..361 161 40.6 Plus
CG43901-PB 2216 CG43901-PB 2093..2193 261..361 161 40.6 Plus
CG43901-PA 2281 CG43901-PA 2158..2258 261..361 161 40.6 Plus
CG10543-PD 1631 CG10543-PD 992..1222 135..368 160 27.1 Plus
CG10543-PE 1634 CG10543-PE 995..1225 135..368 160 27.1 Plus
CG10543-PA 1634 CG10543-PA 995..1225 135..368 160 27.1 Plus
CG10543-PF 1635 CG10543-PF 1009..1226 148..368 158 27.7 Plus
N-PB 2703 CG3936-PB 2404..2570 221..363 157 33.1 Plus
N-PA 2703 CG3936-PA 2404..2570 221..363 157 33.1 Plus
sr-PE 906 CG7847-PE 209..418 181..367 155 29.9 Plus
sr-PB 906 CG7847-PB 209..418 181..367 155 29.9 Plus
sr-PA 1186 CG7847-PA 489..698 181..367 155 29.9 Plus
sr-PD 1271 CG7847-PD 489..698 181..367 155 29.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:39:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11836-PA 374 GI11836-PA 1..374 1..392 841 53.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:39:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25776-PA 350 GL25776-PA 1..350 1..392 831 59.9 Plus
Dper\GL18367-PA 175 GL18367-PA 1..158 1..177 587 71.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:39:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25438-PA 350 GA25438-PA 1..350 1..392 829 59.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:39:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13651-PA 380 GM13651-PA 1..380 1..392 1356 90.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:39:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22517-PA 376 GD22517-PA 1..376 1..392 1391 91.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:39:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13950-PA 359 GJ13950-PA 1..359 1..392 830 56.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:39:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14861-PA 429 GK14861-PA 1..429 1..392 724 48.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:39:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18381-PA 377 GE18381-PA 1..377 1..392 1267 83 Plus

GM14337.hyp Sequence

Translation from 487 to 1665

> GM14337.hyp
MSHGEDVLDNWEEIDEDGLSMTLQTKLQTSDPPVNKMKLLQRPQSVQESS
QILSSGDGGGGGGNGGGNPPPRQITIARKPQVPPAEVDSSTQQEQQQQPV
MMVLHKTTNDYDAATYCTPTSNQTVKILRRPAQAEERRDINGMRPKQPIK
TLKQREQEYAEARLRILGAAKNPEDDKPATPITPAVNSSSVAVSSAAPPV
TPPSAISNNNVINNNSSHPGGGMHRSSSAPKMSQVTPMYNNYNSYFPGLH
NQPGLNYYYPHNPQHQHQHQQQQQQQPSQHFNQRLPPYGGGGSGLGGVGM
QAQAPPQSSPNPQQSWSPVVGGSVSAALLRQQSLQSPQQHQQQHQQQHQH
QQQHQNHQAQQLGQHPHPFNDLVLRLPKGPCPNGSIGFQMRR*

GM14337.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:35:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG31908-PC 392 CG31908-PC 1..392 1..392 2104 100 Plus
CG31908-PB 392 CG31908-PB 1..392 1..392 2104 100 Plus
CG31908-PA 392 CG31908-PA 1..392 1..392 2104 100 Plus
tlk-PG 1489 CG34412-PG 93..356 95..361 162 27.5 Plus
vvl-PC 713 CG10037-PC 439..695 132..382 161 26.4 Plus