Clone GM14344 Report

Search the DGRC for GM14344

Clone and Library Details

Library:GM
Tissue Source:Drosophila melanogaster ovary
Created by:Ling Hong
Date Registered:1997-11-24
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:143
Well:44
Vector:pOT2
Associated Gene/TranscriptCG11597-RA
Protein status:GM14344.pep: gold
Preliminary Size:2200
Sequenced Size:1795

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11597 2001-09-19 Blastp of sequenced clone
CG11597 2008-04-29 Release 5.5 accounting

Clone Sequence Records

GM14344.complete Sequence

1795 bp (1795 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058490

> GM14344.complete
AATATTGGTGATATCATAGTGTGTTCAAGAGAGGCAAAGAGAAACTCTCT
TGCGCTCTCTCCTTAAAACGGAGAGTGCGTGGAAATGAAAACATTGCTTT
CACCATCTCGCCGATTAGTCTGCATATCAGTGTTTAGTCGGCTTTTCGCT
TTCGTTAGATAAAAATTAAGTGCGTGGTGTCGTTGCAATTCGCGGATTAT
ATAAGGGATTTGAGCCGCGACTGCATTGATTTTCCATTGGCCATGGCCCG
CATCGTTGAAAGCAATGTAAGTTAAATGCAACTAATTCCGTTCGCTGGTA
TGTTTATATAACTCCTCGATTCGCATCACCACCTGCCCCGCCCACATCCA
TCTTGTTCTATTCCCCCTCACATTTCATAGTTGTCAGTGATGATCATTTT
TCTCTTGGCCAAATGCCTAATGCCTCGGTGGTTTTGCATTCTCCCAAATT
TGTTGGTCAACAGTGATGGGAACTGTTTGTATTAGTTATTTGTTATTATT
TTAAATTATGAATAATTGAGAGAACTAAATGCTTGCACTGTAGAAATAGT
TTGTAACCTAGCCACCTGATCATTTAACTCATCTATTGGCTCATAAACTA
ACACAATATGTAAATAGTTTCCTTCCCATCACTGTTGCCCAGTGACGTCG
CCGACTTAAGAATAGAGATGATGTCTGCCTTGTGCCCCGAGGCAATGAAT
GATGCGGATCGTCTGGTGGAAAATCTGCGCCATGTGCCGGTCCGCCTGCC
CAGGGAGTTGGAGGTTCGCCAGCTGTGCCGCTCGTTGAGTGACTTGCTCG
TCGGCGAGTCGAATCTACTGAGCCTGCAGAGTCCGCAGATCGTATGCGGT
GACATTCACGGTCAGTTCGAGGATCTGCTCCACCTGCTGGAATTGGGCGG
TTCGGTGCAGGAGCATCGCTACTTGTTCCTGGGTGACCTGGTGGATCGGG
GCAAGAACAGCGTGGAGACCTTTCTTCTGCTAGCTGCTCTCAAGGTGCGA
CATCCGGCACAAGTTAGCCTGCTACGGGGCAATCATGAGTGCCGCAGTGC
CACTCGATCCTATGGATTCTACGAGGAGTGCCTTTCGCGGTACGGCTCTG
CGAATGTCTGGAGGATGTGCTGCCGTGTCTTCGATCTCTTGCCGCTGGCG
GCTATCATTGATGGCAATATATTGTGTGTTCATGGCGGCCTGTCGCCGGA
TATGCAACGATTGGATGACTTACGTAGCCTGGATCGCTGCCACGAGATAC
CCGAAAGTGGAATTATAGCTGATCTTCTCTGGAGCGATCCACAGGAAGCG
CCTGGATGGGCGGCATCGCCACGAGGACATGGAAAACTCTTCGGTGGCGA
TGTTGTTGAGGAGTTTACGCGCGCAAATGGAATCTCTCTCATATGCCGCG
CTCATCAGTTGGCCCAGGATGGCTTCCGTTGGCATTTTGGCCAACTTCTT
GTTACCATATGGTCAGCACCCAACTATTGCTATCGCTGCGGCAACAAAGC
GGCTATTCTGCGCTTAAATGCTGCTGGCGATTATGATTTTAAAGTGTTCG
AAGCGCAGGCGCTGCACTCCAAACCGCAGCCAAGGAAACCGAAAAAGCGT
TGTCGTCAATTTTTTCAATGATTTAATCGCTATCTGAATCTTATCCCAAG
TATTAATACGGTTTGAACTGGCCGAACCTACCGATCACTCCAAAGCGACC
TTTGCCATTCCAAACTACTCATATACTCATAATTTCGTAATCAATAAAAT
ACGTGTACTTAGTAAAACATGCAAAAAAAAAAAAAAAAAAAAAAA

GM14344.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:20:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG11597-RC 1816 CG11597-RC 45..1816 1..1772 8860 100 Plus
CG11597-RB 1678 CG11597-RB 287..1678 381..1772 6960 100 Plus
CG11597-RA 1441 CG11597-RA 287..1441 618..1772 5775 100 Plus
CG11597-RB 1678 CG11597-RB 28..286 8..266 1295 100 Plus
CG11597-RA 1441 CG11597-RA 28..286 8..266 1295 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:20:28
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11811197..11812962 1772..7 8815 99.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:23:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:20:26
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11820327..11822093 1773..7 8835 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:43:44
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 11813427..11815193 1773..7 8835 100 Minus
Blast to na_te.dros performed 2019-03-16 23:20:26
Subject Length Description Subject Range Query Range Score Percent Strand
TART-C 11124 TART-C TARTC 11124bp 10906..10997 1563..1661 117 63.6 Plus

GM14344.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:21:09 Download gff for GM14344.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11811197..11812964 1..1772 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:08:40 Download gff for GM14344.complete
Subject Subject Range Query Range Percent Splice Strand
CG11597-RB 1..954 668..1621 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:04:24 Download gff for GM14344.complete
Subject Subject Range Query Range Percent Splice Strand
CG11597-RC 1..954 668..1621 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:42:15 Download gff for GM14344.complete
Subject Subject Range Query Range Percent Splice Strand
CG11597-RA 1..954 668..1621 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:48:48 Download gff for GM14344.complete
Subject Subject Range Query Range Percent Splice Strand
CG11597-RA 1..954 668..1621 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:53:23 Download gff for GM14344.complete
Subject Subject Range Query Range Percent Splice Strand
CG11597-RB 22..282 1..262 98 == Plus
CG11597-RB 283..1678 376..1772 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:04:24 Download gff for GM14344.complete
Subject Subject Range Query Range Percent Splice Strand
CG11597-RC 45..1816 1..1772 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:42:15 Download gff for GM14344.complete
Subject Subject Range Query Range Percent Splice Strand
CG11597-RC 45..1806 1..1762 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:35:01 Download gff for GM14344.complete
Subject Subject Range Query Range Percent Splice Strand
CG11597-RB 22..282 1..262 98 == Plus
CG11597-RB 283..1678 376..1772 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:48:48 Download gff for GM14344.complete
Subject Subject Range Query Range Percent Splice Strand
CG11597-RC 45..1806 1..1762 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:21:09 Download gff for GM14344.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11820328..11822095 1..1772 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:21:09 Download gff for GM14344.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11820328..11822095 1..1772 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:21:09 Download gff for GM14344.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11820328..11822095 1..1772 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:42:15 Download gff for GM14344.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11813428..11815195 1..1772 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:11:58 Download gff for GM14344.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11813428..11815195 1..1772 99   Minus

GM14344.hyp Sequence

Translation from 667 to 1620

> GM14344.hyp
MMSALCPEAMNDADRLVENLRHVPVRLPRELEVRQLCRSLSDLLVGESNL
LSLQSPQIVCGDIHGQFEDLLHLLELGGSVQEHRYLFLGDLVDRGKNSVE
TFLLLAALKVRHPAQVSLLRGNHECRSATRSYGFYEECLSRYGSANVWRM
CCRVFDLLPLAAIIDGNILCVHGGLSPDMQRLDDLRSLDRCHEIPESGII
ADLLWSDPQEAPGWAASPRGHGKLFGGDVVEEFTRANGISLICRAHQLAQ
DGFRWHFGQLLVTIWSAPNYCYRCGNKAAILRLNAAGDYDFKVFEAQALH
SKPQPRKPKKRCRQFFQ*

GM14344.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:35:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG11597-PC 317 CG11597-PC 1..317 1..317 1694 100 Plus
CG11597-PB 317 CG11597-PB 1..317 1..317 1694 100 Plus
CG11597-PA 317 CG11597-PA 1..317 1..317 1694 100 Plus
Pp4-19C-PH 307 CG32505-PH 5..299 11..307 913 56.6 Plus
Pp4-19C-PG 307 CG32505-PG 5..299 11..307 913 56.6 Plus

GM14344.pep Sequence

Translation from 667 to 1620

> GM14344.pep
MMSALCPEAMNDADRLVENLRHVPVRLPRELEVRQLCRSLSDLLVGESNL
LSLQSPQIVCGDIHGQFEDLLHLLELGGSVQEHRYLFLGDLVDRGKNSVE
TFLLLAALKVRHPAQVSLLRGNHECRSATRSYGFYEECLSRYGSANVWRM
CCRVFDLLPLAAIIDGNILCVHGGLSPDMQRLDDLRSLDRCHEIPESGII
ADLLWSDPQEAPGWAASPRGHGKLFGGDVVEEFTRANGISLICRAHQLAQ
DGFRWHFGQLLVTIWSAPNYCYRCGNKAAILRLNAAGDYDFKVFEAQALH
SKPQPRKPKKRCRQFFQ*

GM14344.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:48:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25294-PA 308 GF25294-PA 1..307 10..316 1297 77.2 Plus
Dana\GF19488-PA 307 GF19488-PA 5..299 11..307 921 56.6 Plus
Dana\GF19539-PA 303 GF19539-PA 1..296 10..307 817 50 Plus
Dana\GF21831-PA 309 GF21831-PA 6..299 9..304 784 48 Plus
Dana\GF19336-PA 330 GF19336-PA 31..303 30..309 643 45.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:48:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13883-PA 358 GG13883-PA 1..305 10..314 1521 91.5 Plus
Dere\GG17991-PA 307 GG17991-PA 5..299 11..307 921 56.6 Plus
Dere\GG17675-PA 303 GG17675-PA 1..296 10..307 819 50 Plus
Dere\GG10501-PA 309 GG10501-PA 6..299 9..304 784 48 Plus
Dere\GG18356-PA 462 GG18356-PA 163..435 30..309 644 45.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:48:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17590-PA 307 GH17590-PA 5..299 11..307 920 56.6 Plus
Dgri\GH24918-PA 303 GH24918-PA 1..296 10..307 815 49.7 Plus
Dgri\GH10208-PA 309 GH10208-PA 6..299 9..304 782 47.6 Plus
Dgri\GH17149-PA 309 GH17149-PA 20..274 30..284 652 48 Plus
Dgri\GH12016-PA 456 GH12016-PA 157..429 30..309 646 45.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:40:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG11597-PC 317 CG11597-PC 1..317 1..317 1694 100 Plus
CG11597-PB 317 CG11597-PB 1..317 1..317 1694 100 Plus
CG11597-PA 317 CG11597-PA 1..317 1..317 1694 100 Plus
Pp4-19C-PI 307 CG32505-PI 5..299 11..307 913 56.6 Plus
Pp4-19C-PH 307 CG32505-PH 5..299 11..307 913 56.6 Plus
Pp4-19C-PG 307 CG32505-PG 5..299 11..307 913 56.6 Plus
Pp4-19C-PE 307 CG32505-PE 5..299 11..307 913 56.6 Plus
Pp4-19C-PA 307 CG32505-PA 5..299 11..307 913 56.6 Plus
PpV-PD 303 CG12217-PD 1..285 10..296 808 51.9 Plus
PpV-PC 303 CG12217-PC 1..285 10..296 808 51.9 Plus
PpV-PB 303 CG12217-PB 1..285 10..296 808 51.9 Plus
PpV-PA 303 CG12217-PA 1..285 10..296 808 51.9 Plus
mts-PC 309 CG7109-PC 9..298 12..303 780 48.6 Plus
mts-PB 309 CG7109-PB 9..298 12..303 780 48.6 Plus
mts-PA 309 CG7109-PA 9..298 12..303 780 48.6 Plus
flw-PC 330 CG2096-PC 31..303 30..309 644 45.2 Plus
flw-PB 330 CG2096-PB 31..303 30..309 644 45.2 Plus
flw-PA 461 CG2096-PA 162..434 30..309 644 45.2 Plus
Pp1-87B-PA 302 CG5650-PA 30..284 30..284 627 46.1 Plus
Pp1alpha-96A-PB 327 CG6593-PB 30..284 30..284 624 45.7 Plus
Pp1alpha-96A-PA 327 CG6593-PA 30..284 30..284 624 45.7 Plus
Pp1-13C-PA 302 CG9156-PA 30..284 30..284 620 45.7 Plus
PpD6-PA 336 CG8822-PA 27..303 7..279 620 46.8 Plus
Pp1-Y2-PC 313 CG40448-PC 11..308 10..307 606 40.8 Plus
PpD5-PA 346 CG10138-PA 22..302 10..285 601 43.6 Plus
Pp1-Y1-PC 317 CG41534-PC 37..292 30..285 590 45.5 Plus
PpN58A-PA 324 CG3245-PA 47..299 32..284 589 45.7 Plus
CanA1-PB 596 CG1455-PB 111..380 43..305 523 42.2 Plus
CanA1-PD 622 CG1455-PD 111..380 43..305 523 42.2 Plus
CanA1-PA 622 CG1455-PA 111..380 43..305 523 42.2 Plus
PpY-55A-PB 314 CG10930-PB 27..282 29..284 519 39.7 Plus
PpY-55A-PA 314 CG10930-PA 27..282 29..284 519 39.7 Plus
Pp2B-14D-PB 570 CG9842-PB 137..406 43..305 507 41.9 Plus
Pp2B-14D-PC 570 CG9842-PC 137..406 43..305 507 41.9 Plus
Pp2B-14D-PA 570 CG9842-PA 137..406 43..305 507 41.9 Plus
CanA-14F-PD 584 CG9819-PD 145..414 43..305 507 41.9 Plus
CanA-14F-PC 584 CG9819-PC 145..414 43..305 507 41.9 Plus
CanA-14F-PB 584 CG9819-PB 145..414 43..305 507 41.9 Plus
CanA-14F-PA 584 CG9819-PA 145..414 43..305 507 41.9 Plus
PpD3-PC 520 CG8402-PC 225..500 26..296 439 37.8 Plus
PpD3-PA 520 CG8402-PA 225..500 26..296 439 37.8 Plus
PpD3-PB 520 CG8402-PB 225..500 26..296 439 37.8 Plus
rdgC-PB 661 CG44746-PB 127..398 31..284 351 34.1 Plus
rdgC-PI 677 CG44746-PI 143..414 31..284 351 34.1 Plus
rdgC-PH 746 CG44746-PH 212..483 31..284 351 34.1 Plus
rdgC-PG 746 CG44746-PG 212..483 31..284 351 34.1 Plus
rdgC-PF 746 CG44746-PF 212..483 31..284 351 34.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:48:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16239-PA 307 GI16239-PA 5..299 11..307 919 56.6 Plus
Dmoj\GI23703-PA 303 GI23703-PA 1..296 10..307 829 51.3 Plus
Dmoj\GI15404-PA 303 GI15404-PA 1..296 10..307 811 49.3 Plus
Dmoj\GI14963-PA 309 GI14963-PA 6..299 9..304 782 47.6 Plus
Dmoj\GI11758-PA 341 GI11758-PA 53..307 30..284 649 48.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:48:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26791-PA 307 GL26791-PA 5..299 11..307 919 56.6 Plus
Dper\GL26775-PA 303 GL26775-PA 1..296 10..307 817 50.3 Plus
Dper\GL18646-PA 309 GL18646-PA 6..299 9..304 784 48 Plus
Dper\GL27176-PA 302 GL27176-PA 30..295 30..295 623 44.6 Plus
Dper\GL17506-PA 274 GL17506-PA 1..266 10..271 609 47.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:48:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16950-PA 307 GA16950-PA 5..299 11..307 920 56.6 Plus
Dpse\GA25770-PA 308 GA25770-PA 3..308 9..316 883 53.6 Plus
Dpse\GA11484-PA 303 GA11484-PA 1..296 10..307 817 50.3 Plus
Dpse\GA25737-PA 309 GA25737-PA 6..299 9..304 784 48 Plus
Dpse\GA22335-PA 302 GA22335-PA 3..275 30..309 642 45.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:48:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24705-PA 317 GM24705-PA 1..316 1..316 1611 95.6 Plus
Dsec\GM22672-PA 309 GM22672-PA 5..301 11..307 828 53.2 Plus
Dsec\GM16609-PA 309 GM16609-PA 6..299 9..304 784 48 Plus
Dsec\GM26010-PA 302 GM26010-PA 30..284 30..284 627 46.1 Plus
Dsec\GM26605-PA 327 GM26605-PA 30..284 30..284 624 45.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:48:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15536-PA 307 GD15536-PA 5..299 11..307 918 56.2 Plus
Dsim\GD23492-PA 309 GD23492-PA 6..299 9..304 784 48 Plus
Dsim\GD20567-PA 302 GD20567-PA 30..284 30..284 627 46.1 Plus
Dsim\GD21106-PA 327 GD21106-PA 30..295 30..295 622 44.2 Plus
Dsim\GD15806-PA 302 GD15806-PA 30..295 30..295 621 44.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:48:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15931-PA 307 GJ15931-PA 5..299 11..307 908 55.9 Plus
Dvir\GJ23261-PA 303 GJ23261-PA 1..296 10..307 820 50.2 Plus
Dvir\GJ16358-PA 303 GJ16358-PA 1..296 10..307 811 49.3 Plus
Dvir\GJ17232-PA 309 GJ17232-PA 6..299 9..304 782 47.6 Plus
Dvir\GJ13466-PA 341 GJ13466-PA 52..339 30..311 662 44.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:48:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25592-PA 307 GK25592-PA 5..299 11..307 920 56.6 Plus
Dwil\GK16104-PA 303 GK16104-PA 1..296 10..307 815 49.7 Plus
Dwil\GK23721-PA 310 GK23721-PA 7..296 9..307 786 48.2 Plus
Dwil\GK20095-PA 456 GK20095-PA 158..430 30..302 644 45.3 Plus
Dwil\GK19103-PA 343 GK19103-PA 54..340 26..309 630 44.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:48:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15348-PA 307 GE15348-PA 5..299 11..307 921 56.6 Plus
Dyak\GE16465-PA 303 GE16465-PA 1..296 10..307 817 50 Plus
Dyak\GE14639-PA 309 GE14639-PA 6..299 9..304 784 48 Plus
Dyak\GE17843-PA 469 GE17843-PA 170..442 30..309 644 45.2 Plus
Dyak\GE18211-PA 339 GE18211-PA 51..305 26..279 635 49.6 Plus