Clone GM14467 Report

Search the DGRC for GM14467

Clone and Library Details

Library:GM
Tissue Source:Drosophila melanogaster ovary
Created by:Ling Hong
Date Registered:1997-11-24
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:144
Well:67
Vector:pOT2
Associated Gene/TranscriptPex10-RA
Protein status:GM14467.pep: gold
Preliminary Size:1300
Sequenced Size:1048

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7864 2001-01-01 Release 2 assignment
CG7864 2001-11-29 Blastp of sequenced clone
CG7864 2003-01-01 Sim4 clustering to Release 3
CG7864 2008-04-29 Release 5.5 accounting
CG7864 2008-08-15 Release 5.9 accounting
CG7864 2008-12-18 5.12 accounting

Clone Sequence Records

GM14467.complete Sequence

1048 bp (1048 high quality bases) assembled on 2001-11-29

GenBank Submission: AY069290

> GM14467.complete
GCCTTTGAATAAGATATGTTAGAATCAACATTGCAGTAACCCCCAACGAC
ATGGACTTTCGGAACGCCCGTGCCCGGCAGCCGGAGATCGTGAGATCCGT
GCAGAAGGATGCACGGTACACCAACGAGCTGGCCGAAGACTTGTCCGATG
TCTTGCGCCTCACCGGTCCACGGAACTGGATAAAGTACAACCAGATGTGC
CGACTTCTGGCGGAGCTCAGTTACCACGGATTCGCCTCGGCCAATAACCT
TCAGACCCTCGGCGAAGAGTACACGGGGATAATACAGGTGGACGGGAACT
ATAAGCAGATTCCCAGCAGATTGTTACAACTGATTGCCATTGTCCTGGAG
TTTGGTGGCGACTCCCTGTTCCAACGATTGATGCAAAAACTTGACACCTA
CGTGGCCAACAATGACGAGATTCGAACCGAGATCAAGCCGCAGCTAAAGA
AGATTATTCAGAGGCTCAGGCAATCTCCCAGCTACGTAAAGGCCCTGCAC
AAGTCTCTATTCTACTTGGACGCCAGCAAGTACCAGCTGTCCAAGCGCAC
CACGGGCATCAACTACGTACTAATCCGTCACTGGCTGCAGCCGGAATTCT
CGCTGTACGGCTACAAGATACTGGGCGTAATCACTTTCCTGCAGGTCAGC
GTTTCCTTGGCCATTAGTGGATGGGATGCCTGGAGAGAGCACAAGCGCCA
GCAGCTAGAATCAATAAAGCAGGCTGGAAAGAATTTCCTGCAAAGATCTT
CGAGTACAAAGGACGTAGATCCAAACACCCCACAGTGCATCCTTTGCCTG
GAGCCACGTTCTGACAGCAGTTTGACTCCATGCGGCCACATCTTTTGCTG
GAGCTGCCTGCTCGAGTGGCTGGAGGAGCGGGATGAGTGCCCCTTGTGCC
GGGAGTCGCTGAAAAAGTCCCAAGTGATATTACTGCAAAACTATGCCTAA
GATTGGATTAAGACTTTTTATATTCATGTTATAGGAAGTATTTTTGTGTC
TATGTAATATATTTTATTCATATAAATGAAAAAAAAAAAAAAAAAAAA

GM14467.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:54:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG7864-RA 1480 CG7864-RA 453..1480 1..1028 5125 99.9 Plus
CG7879-RB 3792 CG7879-RB 3726..3792 1031..965 335 100 Minus
CG7879-RA 3905 CG7879-RA 3839..3905 1031..965 335 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:28:10
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 1558661..1559366 323..1028 3500 99.7 Plus
chr3L 24539361 chr3L 1558285..1558607 1..323 1615 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:23:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:28:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1559158..1559866 323..1031 3545 100 Plus
3L 28110227 3L 1558782..1559104 1..323 1600 99.7 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:20:10
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 1559158..1559866 323..1031 3545 100 Plus
3L 28103327 3L 1558782..1559104 1..323 1600 99.6 Plus
Blast to na_te.dros performed 2019-03-16 19:28:08
Subject Length Description Subject Range Query Range Score Percent Strand
Transpac 5249 Transpac 5249bp Derived from AF222049 (AF222049.1) (Rel. 62, Last updated, Version 1). 30..67 4..41 109 76.3 Plus
Transpac 5249 Transpac 5249bp Derived from AF222049 (AF222049.1) (Rel. 62, Last updated, Version 1). 4949..4986 4..41 109 76.3 Plus

GM14467.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:29:25 Download gff for GM14467.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 1558285..1558607 1..323 100 -> Plus
chr3L 1558662..1559366 324..1028 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:08:50 Download gff for GM14467.complete
Subject Subject Range Query Range Percent Splice Strand
CG7864-RA 1..900 51..950 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:25:35 Download gff for GM14467.complete
Subject Subject Range Query Range Percent Splice Strand
pex10-RA 1..900 51..950 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:40:58 Download gff for GM14467.complete
Subject Subject Range Query Range Percent Splice Strand
Pex10-RA 1..900 51..950 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:52:51 Download gff for GM14467.complete
Subject Subject Range Query Range Percent Splice Strand
CG7864-RA 1..900 51..950 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:32:40 Download gff for GM14467.complete
Subject Subject Range Query Range Percent Splice Strand
Pex10-RA 1..900 51..950 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:01:33 Download gff for GM14467.complete
Subject Subject Range Query Range Percent Splice Strand
CG7864-RA 453..1480 1..1028 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:25:35 Download gff for GM14467.complete
Subject Subject Range Query Range Percent Splice Strand
pex10-RA 453..1480 1..1028 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:40:58 Download gff for GM14467.complete
Subject Subject Range Query Range Percent Splice Strand
Pex10-RA 460..1487 1..1028 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:52:51 Download gff for GM14467.complete
Subject Subject Range Query Range Percent Splice Strand
CG7864-RA 453..1480 1..1028 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:32:40 Download gff for GM14467.complete
Subject Subject Range Query Range Percent Splice Strand
Pex10-RA 460..1487 1..1028 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:29:25 Download gff for GM14467.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1558782..1559104 1..323 99 -> Plus
3L 1559159..1559863 324..1028 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:29:25 Download gff for GM14467.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1558782..1559104 1..323 99 -> Plus
3L 1559159..1559863 324..1028 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:29:25 Download gff for GM14467.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1558782..1559104 1..323 99 -> Plus
3L 1559159..1559863 324..1028 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:40:58 Download gff for GM14467.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1558782..1559104 1..323 99 -> Plus
arm_3L 1559159..1559863 324..1028 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:28:56 Download gff for GM14467.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1558782..1559104 1..323 99 -> Plus
3L 1559159..1559863 324..1028 100   Plus

GM14467.hyp Sequence

Translation from 50 to 949

> GM14467.hyp
MDFRNARARQPEIVRSVQKDARYTNELAEDLSDVLRLTGPRNWIKYNQMC
RLLAELSYHGFASANNLQTLGEEYTGIIQVDGNYKQIPSRLLQLIAIVLE
FGGDSLFQRLMQKLDTYVANNDEIRTEIKPQLKKIIQRLRQSPSYVKALH
KSLFYLDASKYQLSKRTTGINYVLIRHWLQPEFSLYGYKILGVITFLQVS
VSLAISGWDAWREHKRQQLESIKQAGKNFLQRSSSTKDVDPNTPQCILCL
EPRSDSSLTPCGHIFCWSCLLEWLEERDECPLCRESLKKSQVILLQNYA*

GM14467.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:37:15
Subject Length Description Subject Range Query Range Score Percent Strand
Pex10-PB 299 CG7864-PB 1..299 1..299 1562 100 Plus
Pex10-PA 299 CG7864-PA 1..299 1..299 1562 100 Plus

GM14467.pep Sequence

Translation from 50 to 949

> GM14467.pep
MDFRNARARQPEIVRSVQKDARYTNELAEDLSDVLRLTGPRNWIKYNQMC
RLLAELSYHGFASANNLQTLGEEYTGIIQVDGNYKQIPSRLLQLIAIVLE
FGGDSLFQRLMQKLDTYVANNDEIRTEIKPQLKKIIQRLRQSPSYVKALH
KSLFYLDASKYQLSKRTTGINYVLIRHWLQPEFSLYGYKILGVITFLQVS
VSLAISGWDAWREHKRQQLESIKQAGKNFLQRSSSTKDVDPNTPQCILCL
EPRSDSSLTPCGHIFCWSCLLEWLEERDECPLCRESLKKSQVILLQNYA*

GM14467.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:15:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24775-PA 299 GF24775-PA 1..299 1..299 1425 88 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:15:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14799-PA 299 GG14799-PA 1..299 1..299 1550 96.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:15:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17052-PA 299 GH17052-PA 1..299 1..299 1348 81.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:57:53
Subject Length Description Subject Range Query Range Score Percent Strand
Pex10-PB 299 CG7864-PB 1..299 1..299 1562 100 Plus
Pex10-PA 299 CG7864-PA 1..299 1..299 1562 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:15:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12055-PA 299 GI12055-PA 1..299 1..299 1342 79.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:15:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17108-PA 287 GL17108-PA 1..287 1..299 1315 81.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:15:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20642-PA 287 GA20642-PA 1..287 1..299 1309 81.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:15:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14421-PA 299 GM14421-PA 1..299 1..299 1547 96 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:15:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13625-PA 299 GD13625-PA 1..299 1..299 1552 97 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:15:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13327-PA 299 GJ13327-PA 1..299 1..299 1341 80.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:15:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12570-PA 301 GK12570-PA 1..301 1..299 1358 82.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:15:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21161-PA 299 GE21161-PA 1..299 1..299 1550 96.7 Plus