BDGP Sequence Production Resources |
Search the DGRC for GM14478
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 144 |
Well: | 78 |
Vector: | pOT2 |
Associated Gene/Transcript | RpI12-RA |
Protein status: | GM14478.pep: gold |
Preliminary Size: | 703 |
Sequenced Size: | 521 |
Gene | Date | Evidence |
---|---|---|
RpI12 | 2008-12-18 | 5.12 accounting |
521 bp assembled on 2008-12-08
GenBank Submission: BT050591.1
> GM14478.complete TTTTGATTTTGGGTGATATATACTGGCATGGATATTTTTTCCAATTGTCC GGGCTTTTGCCCCTCCTGCGGCTCCATTCTGCCCGAGCTTCAAGTCAAGG GCAATGTGATTTGCTACAACTGCAAGAAGGAGTTTCAGCCAGATGTTTAC AGCGGCGAGAAGTCCGAGTTTACCATACACTTCAACACCTACGATCCCAG CAAGGTGTTCAACAGGACGAAAAGGGAGTCGGAATCGGACGCGGATGGCC CCGTTGTGGAGAGGAAGTGTCCCAAGTGCAACCACGACAAGATGTCCTAT GCCACCCTGCAGCTTCGATCGGCGGACGAAGGCCAGACGGTGTTCTTTAC CTGCCTTAAGTGCAAATTCAAAGAATCCGAAAACTCTTAGTTGCTAGCAA TGTCCGTGTAAATAGTCCTAGATTAATGAAAATAATCATGCTCGACGGCC TGAGAAATATAGAATTTACCAATTATAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 17601132..17601352 | 365..145 | 1105 | 100 | Minus |
chr3R | 27901430 | chr3R | 17601403..17601547 | 145..1 | 725 | 100 | Minus |
chr3R | 27901430 | chr3R | 17600957..17601072 | 476..361 | 565 | 99.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 21777378..21777598 | 365..145 | 1105 | 100 | Minus |
3R | 32079331 | 3R | 21777649..21777793 | 145..1 | 725 | 100 | Minus |
3R | 32079331 | 3R | 21777201..21777318 | 478..361 | 575 | 99.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 21518209..21518429 | 365..145 | 1105 | 100 | Minus |
3R | 31820162 | 3R | 21518480..21518624 | 145..1 | 725 | 100 | Minus |
3R | 31820162 | 3R | 21518032..21518149 | 478..361 | 575 | 99.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 17600957..17601067 | 366..476 | 100 | <- | Minus |
chr3R | 17601132..17601351 | 146..365 | 100 | <- | Minus |
chr3R | 17601403..17601547 | 1..145 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpI12-RA | 1..363 | 28..390 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpI12-RA | 1..363 | 28..390 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpI12-RA | 1..363 | 28..390 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpI12-RA | 1..363 | 28..390 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpI12-RA | 1..471 | 6..476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpI12-RA | 1..471 | 6..476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpI12-RA | 55..530 | 1..476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpI12-RA | 55..530 | 1..476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21777203..21777313 | 366..476 | 100 | <- | Minus |
3R | 21777378..21777597 | 146..365 | 100 | <- | Minus |
3R | 21777649..21777793 | 1..145 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21777203..21777313 | 366..476 | 100 | <- | Minus |
3R | 21777378..21777597 | 146..365 | 100 | <- | Minus |
3R | 21777649..21777793 | 1..145 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21777203..21777313 | 366..476 | 100 | <- | Minus |
3R | 21777378..21777597 | 146..365 | 100 | <- | Minus |
3R | 21777649..21777793 | 1..145 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 17602925..17603035 | 366..476 | 100 | <- | Minus |
arm_3R | 17603100..17603319 | 146..365 | 100 | <- | Minus |
arm_3R | 17603371..17603515 | 1..145 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21518480..21518624 | 1..145 | 100 | Minus | |
3R | 21518209..21518428 | 146..365 | 100 | <- | Minus |
3R | 21518034..21518144 | 366..476 | 100 | <- | Minus |
Translation from 27 to 389
> GM14478.pep MDIFSNCPGFCPSCGSILPELQVKGNVICYNCKKEFQPDVYSGEKSEFTI HFNTYDPSKVFNRTKRESESDADGPVVERKCPKCNHDKMSYATLQLRSAD EGQTVFFTCLKCKFKESENS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17465-PA | 121 | GF17465-PA | 1..121 | 1..120 | 573 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22692-PA | 120 | GG22692-PA | 1..120 | 1..120 | 610 | 95 | Plus |
Dere\GG11044-PA | 120 | GG11044-PA | 1..120 | 1..120 | 610 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16255-PA | 120 | GH16255-PA | 1..120 | 1..120 | 517 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpI12-PA | 120 | CG13418-PA | 1..120 | 1..120 | 662 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22183-PA | 121 | GI22183-PA | 1..121 | 1..120 | 502 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23744-PA | 121 | GL23744-PA | 1..121 | 1..120 | 553 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12270-PA | 121 | GA12270-PA | 1..121 | 1..120 | 553 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23695-PA | 120 | GM23695-PA | 1..120 | 1..120 | 621 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18505-PA | 120 | GD18505-PA | 1..120 | 1..120 | 615 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24301-PA | 121 | GJ24301-PA | 1..121 | 1..120 | 516 | 80.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13021-PA | 121 | GK13021-PA | 1..121 | 1..120 | 558 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24089-PA | 120 | GE24089-PA | 1..120 | 1..120 | 616 | 96.7 | Plus |
Translation from 27 to 389
> GM14478.hyp MDIFSNCPGFCPSCGSILPELQVKGNVICYNCKKEFQPDVYSGEKSEFTI HFNTYDPSKVFNRTKRESESDADGPVVERKCPKCNHDKMSYATLQLRSAD EGQTVFFTCLKCKFKESENS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpI12-PA | 120 | CG13418-PA | 1..120 | 1..120 | 662 | 100 | Plus |