Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
GM14667.complete Sequence
798 bp (798 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075371
> GM14667.complete
GAAATCTGAGGAAGCCGGAGATCCTGTTGGTCTGTGTGATTTTTTCGCAT
CCAGCGCAAGCAGTGTGTAGTGCTCGAGGGCCCGTGGTTACCAGTGAGTG
TGTGAGGAAGTTGAGAAGTTGAGTTTAAGAAGCGGAGTCGGATTTGCGGA
TCAGTAGTCTAACCAAAACCGAAGCAAAGATGTCGATGTCTGCCACGTGC
TACAAGTGCAACCGGCCGGGCCACTTTGCCCGGGACTGCAGTCTCGGCGG
CGGCGGAGGTCCGGGCGGCGTTGGAGGAGGCGGTGGTGGCGGCGGCGGCG
GTATGCGCGGCAACGATGGCGGCGGCATGCGTCGCAACCGCGAGAAGTGC
TACAAATGCAACCAATTTGGGCACTTCGCACGTGCCTGCCCCGAGGAGGC
CGAGCGCTGCTACCGCTGCAACGGCATCGGGCACATCTCGAAGGACTGCA
CCCAGGCGGACAACCCGACCTGCTACCGTTGCAACAAGACCGGACACTGG
GTGCGCAACTGCCCAGAGGCCGTCAACGAACGTGGACCGACCAATGTGTC
GTGCTACAAGTGCAACCGCACCGGACACATCTCCAAGAACTGCCCGGAGA
CCTCGAAGACTTGCTACGGCTGCGGCAAGAGCGGACATCTGAGGCGCGAG
TGCGACGAGAAGGGCGGACGGAACTAGGCGCCACCACCCACCCGTGGCAC
CTCATAAATGTAATCATCGAAGGAGGAATATGAGTAATAATTCAACACAC
GAAGAACAACCAGAAGAAAAGATGAGAACGAAAAAAAAAAAAAAAAAA
GM14667.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:34:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3800-RA | 2358 | CG3800-RA | 240..1037 | 1..798 | 3945 | 99.6 | Plus |
CG3800.a | 2164 | CG3800.a | 240..1037 | 1..798 | 3945 | 99.6 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:25:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 18822423..18823202 | 780..1 | 3900 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:24:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:25:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22935894..22936691 | 798..1 | 3945 | 99.6 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:02:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 22937093..22937890 | 798..1 | 3945 | 99.6 | Minus |
Blast to na_te.dros performed 2019-03-16 17:25:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 1793..1858 | 699..762 | 109 | 65.2 | Plus |
GM14667.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:26:21 Download gff for
GM14667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 18822959..18823202 | 1..244 | 100 | | Minus |
chr2R | 18822423..18822876 | 327..780 | 100 | == | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:09:09 Download gff for
GM14667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3800-RA | 1..498 | 180..677 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:56:41 Download gff for
GM14667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3800-RB | 1..498 | 180..677 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:55:29 Download gff for
GM14667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3800-RA | 1..498 | 180..677 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:21:31 Download gff for
GM14667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3800-RA | 1..498 | 180..677 | 99 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:58:14 Download gff for
GM14667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3800-RA | 1..498 | 180..677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:20:59 Download gff for
GM14667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3800-RA | 240..1019 | 1..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:56:41 Download gff for
GM14667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3800-RB | 33..812 | 1..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:55:29 Download gff for
GM14667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3800-RA | 387..1166 | 1..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:21:31 Download gff for
GM14667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3800-RA | 240..1019 | 1..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:58:14 Download gff for
GM14667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3800-RA | 387..1166 | 1..780 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:26:21 Download gff for
GM14667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22935912..22936691 | 1..780 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:26:21 Download gff for
GM14667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22935912..22936691 | 1..780 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:26:21 Download gff for
GM14667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22935912..22936691 | 1..780 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:55:29 Download gff for
GM14667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18823435..18824214 | 1..780 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:56:17 Download gff for
GM14667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22937129..22937908 | 1..780 | 99 | | Minus |
GM14667.hyp Sequence
Translation from 179 to 676
> GM14667.hyp
MSMSATCYKCNRPGHFARDCSLGGGGGPGGVGGGGGGGGGGMRGNDGGGM
RRNREKCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADNPTCYR
CNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGK
SGHLRRECDEKGGRN*
GM14667.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:40:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3800-PB | 165 | CG3800-PB | 1..165 | 1..165 | 977 | 100 | Plus |
CG3800-PA | 165 | CG3800-PA | 1..165 | 1..165 | 977 | 100 | Plus |
x16-PB | 257 | CG10203-PB | 81..141 | 14..81 | 173 | 54.4 | Plus |
x16-PA | 258 | CG10203-PA | 81..136 | 14..76 | 168 | 55.6 | Plus |
GM14667.pep Sequence
Translation from 179 to 676
> GM14667.pep
MSMSATCYKCNRPGHFARDCSLGGGGGPGGVGGGGGGGGGGMRGNDGGGM
RRNREKCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADNPTCYR
CNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGK
SGHLRRECDEKGGRN*
GM14667.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:46:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CNBP-PB | 165 | CG3800-PB | 1..165 | 1..165 | 977 | 100 | Plus |
CNBP-PA | 165 | CG3800-PA | 1..165 | 1..165 | 977 | 100 | Plus |
x16-PB | 257 | CG10203-PB | 81..141 | 14..81 | 173 | 54.4 | Plus |
x16-PA | 258 | CG10203-PA | 81..136 | 14..76 | 168 | 55.6 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 02:59:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA17695-PA | 159 | GA17695-PA | 1..159 | 1..165 | 772 | 93.9 | Plus |