Clone GM15545 Report

Search the DGRC for GM15545

Clone and Library Details

Library:GM
Tissue Source:Drosophila melanogaster ovary
Created by:Ling Hong
Date Registered:1997-11-24
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:155
Well:45
Vector:pOT2
Associated Gene/Transcript14-3-3zeta-RD
Protein status:GM15545.pep: gold
Sequenced Size:1726

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
14-3-3zeta-RJ 2009-02-19 Manual selection by Sue Celniker

Clone Sequence Records

GM15545.complete Sequence

1726 bp assembled on 2009-04-13

GenBank Submission: BT082022.1

> GM15545.complete
CTCGTGCCGAATTCGGCACGAGGAATAAAGCCATTGTTAGCAACTTTTGA
GGGGCATATCGAACTGTGTGGCGTATTTTATTAGTTTTGTGAAGTAACCG
AAAAAAAAAAATCAAACAAAATGTCGACAGTCGATAAGGAAGAGCTGGTC
CAGAAGGCTAAACTGGCCGAGCAGTCAGAACGTTACGATGATATGGCCCA
GGCCATGAAGTCCGTCACAGAGACTGGCGTTGAGCTCTCAAATGAGGAAA
GAAATCTGCTCTCCGTTGCCTACAAAAATGTGGTCGGTGCCCGCAGGTCA
TCGTGGCGTGTCATCTCCTCCATTGAGCAGAAAACCGAAGCATCCGCTAG
AAAACAGCAGCTCGCCCGTGAGTACAGAGAGCGTGTGGAGAAGGAGCTGA
GGGAAATCTGCTACGAAGTTTTGGGACTTCTGGACAAATACCTTATTCCA
AAAGCCAGCAATCCCGAGAGCAAGGTGTTTTACCTGAAGATGAAGGGTGA
TTACTACAGGTATTTAGCCGAGGTTGCCACAGGAGATGCACGCAACACCG
TTGTCGATGACTCGCAAACCGCTTACCAGGATGCATTTGACATTAGCAAG
GGTAAAATGCAGCCAACACATCCCATCCGTTTAGGTCTGGCCCTTAACTT
CTCAGTCTTCTACTATGAGATTTTGAACTCACCAGACAAAGCTTGCCAAT
TGGCTAAACAGGCGTTCGATGATGCGATAGCCGAGCTGGACACACTGAAC
GAGGACTCCTACAAGGACTCGACACTCATCATGCAGCTGTTGAGGGACAA
CCTGACTCTCTGGACGTCCGACACCCAAGGCGACGAAGCTGAGCCACAGG
AGGGCGGCGACAACTAACCAAACAACTAAGCAAATGTTTCCTTTTTGACT
ATGCAAATATTATTCAGTAATACAAACAAACAAAAACCAGAAACAACAAA
GAGAAACAAATATTATAAAACGCAACCAGCAAAGCAAAACAATTTGAAAT
GAAACGATAATCCAGGCGAGAGCAGCAGACAGGCAGGCAAAAAGCGCGAA
CATTTGAGACATTAACATACGAATTGAGGGCAGAATGCTTCACAGTTCAT
TTGGGGCCGATGGGCCGGCATTTGAGGCCGTTTTCCCGATTGTCACGGGT
AGTTTTTAGCCGGGTTCCGGTTGCAAGCGAATCCAGTATACAGATGGTCA
AATGCTTGGACAGATGCCGGCCAATCCGACTCAAATGTAGCTTAAGATCT
GCAACTGCTTAAGAAATACAGAAAAATACAGCATCGCTGTGAGGGTCAAA
CGAATGCGGACTATTTGGGAGTTTGGCATGATTTTTCCGGATTTTGAATC
AAATTAATCTAGCAGATAATTCGTTATTGTGTGTGTTTTTCCCGATCGAA
ACGGCCAAACTCTAGATGCTCCGAATTTGTTCGCCCTGGCGGTGCCTCGT
GTGGATTTCCTCCTTACAAAACAACAAAAAAAAAACAACTAAATAATATT
CCTAACTGTATACACAAGAAATGAAATGATATAATCGGTTATTATACGTT
TTTTGCAACAGTCCAAATTAATATTTAATTTTCGTATGGCAACAGAAACA
ACTGCAAAAGATACAGCAACAACAACAACAACCAAGCGAACCAAATGAGA
AAACAAAAATAAAAACAAACTTATGTATTATTTGTAATTCTTTTTCTAAA
CAAATAAAACCAAAAAACCTAAAAAA

GM15545.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:30:32
Subject Length Description Subject Range Query Range Score Percent Strand
14-3-3zeta-RD 3102 14-3-3zeta-RD 149..1845 23..1721 8410 99.7 Plus
14-3-3zeta.t 2328 14-3-3zeta.t 149..1845 23..1721 8410 99.7 Plus
14-3-3zeta-RJ 1872 14-3-3zeta-RJ 149..1845 23..1721 8410 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:15:54
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 5995011..5996022 709..1720 5045 99.9 Plus
chr2R 21145070 chr2R 5993491..5993655 548..712 825 100 Plus
chr2R 21145070 chr2R 5991804..5991958 27..182 730 99.4 Plus
chr2R 21145070 chr2R 5992487..5992617 294..424 655 100 Plus
chr2R 21145070 chr2R 5993251..5993375 423..547 625 100 Plus
chr2R 21145070 chr2R 5992265..5992381 182..298 585 100 Plus
chr2R 21145070 chr2R 5993839..5994003 548..712 510 87.3 Plus
chr3R 27901430 chr3R 14072268..14072431 658..821 355 81.1 Plus
chr2R 21145070 chr2R 5994240..5994348 604..712 215 79.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:24:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:15:53
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10107464..10108476 709..1721 5050 99.9 Plus
2R 25286936 2R 10105941..10106105 548..712 810 99.4 Plus
2R 25286936 2R 10104256..10104409 27..182 715 98.7 Plus
2R 25286936 2R 10104938..10105068 294..424 655 100 Plus
2R 25286936 2R 10105701..10105825 423..547 625 100 Plus
2R 25286936 2R 10104716..10104832 182..298 585 100 Plus
2R 25286936 2R 10106289..10106453 548..712 540 88.5 Plus
3R 32079331 3R 18247974..18248137 658..821 355 81.1 Plus
2R 25286936 2R 10106690..10106798 604..712 215 79.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:47:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 10108663..10109675 709..1721 5050 99.9 Plus
2R 25260384 2R 10107140..10107304 548..712 810 99.3 Plus
2R 25260384 2R 10105455..10105608 27..182 725 98.7 Plus
2R 25260384 2R 10106137..10106267 294..424 655 100 Plus
2R 25260384 2R 10106900..10107024 423..547 625 100 Plus
2R 25260384 2R 10105915..10106031 182..298 585 100 Plus
2R 25260384 2R 10107544..10107652 604..712 530 99 Plus
3R 31820162 3R 17988805..17988968 658..821 355 81 Plus
2R 25260384 2R 10107889..10107997 604..712 215 79.8 Plus
Blast to na_te.dros performed on 2019-03-15 23:15:53 has no hits.

GM15545.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:16:59 Download gff for GM15545.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 5993252..5993375 424..547 100 -> Plus
chr2R 5992266..5992379 183..296 100 -> Plus
chr2R 5992490..5992616 297..423 100 -> Plus
chr2R 5993491..5993654 548..711 100 -> Plus
chr2R 5991804..5991958 27..182 99 -> Plus
chr2R 5995014..5995892 712..1590 99 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:49:27 Download gff for GM15545.complete
Subject Subject Range Query Range Percent Splice Strand
14-3-3zeta-RJ 1..747 121..867 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:45:39 Download gff for GM15545.complete
Subject Subject Range Query Range Percent Splice Strand
14-3-3zeta-RJ 1..747 121..867 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:35:24 Download gff for GM15545.complete
Subject Subject Range Query Range Percent Splice Strand
14-3-3zeta-RJ 1..747 121..867 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:26:30 Download gff for GM15545.complete
Subject Subject Range Query Range Percent Splice Strand
14-3-3zeta-RJ 1..747 121..867 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-04-13 17:41:34 Download gff for GM15545.complete
Subject Subject Range Query Range Percent Splice Strand
14-3-3zeta-RD 60..1758 19..1720 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:45:39 Download gff for GM15545.complete
Subject Subject Range Query Range Percent Splice Strand
14-3-3zeta-RD 60..1758 19..1720 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:35:24 Download gff for GM15545.complete
Subject Subject Range Query Range Percent Splice Strand
14-3-3zeta-RD 56..1754 19..1720 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:26:30 Download gff for GM15545.complete
Subject Subject Range Query Range Percent Splice Strand
14-3-3zeta-RD 56..1754 19..1720 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:16:59 Download gff for GM15545.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10104256..10104409 27..182 98 -> Plus
2R 10104717..10104830 183..296 100 -> Plus
2R 10104941..10105067 297..423 100 -> Plus
2R 10105702..10105825 424..547 100 -> Plus
2R 10105941..10106104 548..711 99 -> Plus
2R 10107467..10108475 712..1720 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:16:59 Download gff for GM15545.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10104256..10104409 27..182 98 -> Plus
2R 10104717..10104830 183..296 100 -> Plus
2R 10104941..10105067 297..423 100 -> Plus
2R 10105702..10105825 424..547 100 -> Plus
2R 10105941..10106104 548..711 99 -> Plus
2R 10107467..10108475 712..1720 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:16:59 Download gff for GM15545.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10104256..10104409 27..182 98 -> Plus
2R 10104717..10104830 183..296 100 -> Plus
2R 10104941..10105067 297..423 100 -> Plus
2R 10105702..10105825 424..547 100 -> Plus
2R 10105941..10106104 548..711 99 -> Plus
2R 10107467..10108475 712..1720 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:35:24 Download gff for GM15545.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5991761..5991914 27..182 98 -> Plus
arm_2R 5992222..5992335 183..296 100 -> Plus
arm_2R 5992446..5992572 297..423 100 -> Plus
arm_2R 5993207..5993330 424..547 100 -> Plus
arm_2R 5993446..5993609 548..711 99 -> Plus
arm_2R 5994972..5995980 712..1720 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:20:57 Download gff for GM15545.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10108666..10109674 712..1720 99   Plus
2R 10105455..10105608 27..182 98 -> Plus
2R 10105916..10106029 183..296 100 -> Plus
2R 10106140..10106266 297..423 100 -> Plus
2R 10106901..10107024 424..547 100 -> Plus
2R 10107140..10107303 548..711 99 -> Plus

GM15545.hyp Sequence

Translation from 120 to 866

> GM15545.hyp
MSTVDKEELVQKAKLAEQSERYDDMAQAMKSVTETGVELSNEERNLLSVA
YKNVVGARRSSWRVISSIEQKTEASARKQQLAREYRERVEKELREICYEV
LGLLDKYLIPKASNPESKVFYLKMKGDYYRYLAEVATGDARNTVVDDSQT
AYQDAFDISKGKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFD
DAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDEAEPQEGGDN*

GM15545.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:43:43
Subject Length Description Subject Range Query Range Score Percent Strand
14-3-3zeta-PL 248 CG17870-PL 1..248 1..248 1256 100 Plus
14-3-3zeta-PK 248 CG17870-PK 1..248 1..248 1256 100 Plus
14-3-3zeta-PJ 248 CG17870-PJ 1..248 1..248 1256 100 Plus
14-3-3zeta-PE 248 CG17870-PE 1..248 1..248 1256 100 Plus
14-3-3zeta-PD 248 CG17870-PD 1..248 1..248 1256 100 Plus

GM15545.pep Sequence

Translation from 120 to 866

> GM15545.pep
MSTVDKEELVQKAKLAEQSERYDDMAQAMKSVTETGVELSNEERNLLSVA
YKNVVGARRSSWRVISSIEQKTEASARKQQLAREYRERVEKELREICYEV
LGLLDKYLIPKASNPESKVFYLKMKGDYYRYLAEVATGDARNTVVDDSQT
AYQDAFDISKGKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFD
DAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDEAEPQEGGDN*

GM15545.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:33:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12019-PA 248 GF12019-PA 1..248 1..248 1298 99.2 Plus
Dana\GF23073-PA 263 GF23073-PA 2..245 4..245 855 66.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:33:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24140-PA 248 GG24140-PA 1..248 1..248 1314 100 Plus
Dere\GG22781-PA 262 GG22781-PA 3..245 5..245 853 66.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:33:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21250-PA 248 GH21250-PA 1..248 1..248 1298 99.2 Plus
Dgri\GH18560-PA 260 GH18560-PA 2..245 4..245 844 66 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:08:15
Subject Length Description Subject Range Query Range Score Percent Strand
14-3-3zeta-PL 248 CG17870-PL 1..248 1..248 1256 100 Plus
14-3-3zeta-PK 248 CG17870-PK 1..248 1..248 1256 100 Plus
14-3-3zeta-PJ 248 CG17870-PJ 1..248 1..248 1256 100 Plus
14-3-3zeta-PE 248 CG17870-PE 1..248 1..248 1256 100 Plus
14-3-3zeta-PD 248 CG17870-PD 1..248 1..248 1256 100 Plus
14-3-3zeta-PI 248 CG17870-PI 1..248 1..248 1232 98 Plus
14-3-3zeta-PA 248 CG17870-PA 1..248 1..248 1232 98 Plus
14-3-3zeta-PG 248 CG17870-PG 1..248 1..248 1232 98 Plus
14-3-3zeta-PH 248 CG17870-PH 1..248 1..248 1232 98 Plus
14-3-3zeta-PB 248 CG17870-PB 1..248 1..248 1232 98 Plus
14-3-3zeta-PC 248 CG17870-PC 1..248 1..248 1209 96 Plus
14-3-3zeta-PF 248 CG17870-PF 1..248 1..248 1209 96 Plus
14-3-3epsilon-PA 262 CG31196-PA 3..245 5..245 827 66.7 Plus
14-3-3epsilon-PC 256 CG31196-PC 3..245 5..244 816 66.7 Plus
14-3-3epsilon-PD 260 CG31196-PD 3..245 5..245 814 65.8 Plus
14-3-3epsilon-PB 261 CG31196-PB 3..244 5..245 813 66.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:33:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20537-PA 248 GI20537-PA 1..248 1..248 1298 99.2 Plus
Dmoj\GI24759-PA 260 GI24759-PA 2..245 4..245 844 66 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:33:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17609-PA 248 GL17609-PA 1..248 1..248 1298 99.2 Plus
Dper\GL21790-PA 262 GL21790-PA 3..245 5..245 853 66.7 Plus
Dper\GL25387-PA 250 GL25387-PA 10..235 12..236 610 52.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:33:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24843-PA 248 GA24843-PA 1..248 1..248 1298 99.2 Plus
Dpse\GA16084-PA 262 GA16084-PA 3..245 5..245 853 66.7 Plus
Dpse\GA22759-PA 250 GA22759-PA 10..235 12..236 609 52.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:33:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21186-PA 248 GM21186-PA 1..248 1..248 1314 100 Plus
Dsec\GM15292-PA 262 GM15292-PA 3..245 5..245 853 66.7 Plus
Dsec\GM12998-PA 138 GM12998-PA 55..138 165..248 451 97.6 Plus
Dsec\GM12998-PA 138 GM12998-PA 1..54 1..54 237 90.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:33:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12271-PA 248 GD12271-PA 1..248 1..248 1307 99.6 Plus
Dsim\GD15169-PA 240 GD15169-PA 1..223 25..245 792 66.8 Plus
Dsim\GD24394-PA 51 GD24394-PA 2..49 184..231 240 93.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:33:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22386-PA 248 GJ22386-PA 1..248 1..248 1292 98.8 Plus
Dvir\GJ22546-PA 260 GJ22546-PA 2..245 4..245 844 66 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:33:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21486-PA 248 GK21486-PA 1..248 1..248 1298 99.2 Plus
Dwil\GK22388-PA 260 GK22388-PA 2..245 4..245 838 65.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:33:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\14-3-3zeta-PA 248 GE19338-PA 1..248 1..248 1314 100 Plus
Dyak\GE25525-PA 256 GE25525-PA 3..245 5..244 841 66.7 Plus