BDGP Sequence Production Resources |
Search the DGRC for GM18993
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 189 |
Well: | 93 |
Vector: | pOT2 |
Associated Gene/Transcript | T48-RA |
Protein status: | GM18993.pep: gold |
Preliminary Size: | 3284 |
Sequenced Size: | 2047 |
Gene | Date | Evidence |
---|---|---|
CG5507 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5507 | 2002-05-18 | Blastp of sequenced clone |
CG5507 | 2003-01-01 | Sim4 clustering to Release 3 |
T48 | 2008-04-29 | Release 5.5 accounting |
T48 | 2008-08-15 | Release 5.9 accounting |
T48 | 2008-12-18 | 5.12 accounting |
2047 bp (2047 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118853
> GM18993.complete GCAAGTGCGAGACGAGAGCAAACGTCGAGCGCAAATTGAATTTACGGTGC CCCATCAAAGTCAAGTCGGCCGACTCCAACTAATTTAATGATCAAAAGTA ACACATTTTTTTCGCATTCGGCGGCAGCCGCTGAGCGGTGTTAATTGAAA GTGTCACGCTTCGTCACAATAATAAATATAATTCCCATCGACTACTGGCT TTCGTCTATGTGAAGTGAGTGCCCGAGTGAAATGCGGTCGGTGGAAGTGG CCCAAAGCGGCCCATCTGCCATCTTCTGGCTCGTCCAAGTGCTAATCGTG GGGGCGGCACAGGCTGCCACGCCCTTCGCGAAAGAGTACCGCAACGCGGG ACTCTACAATGGCAACACACTCGTCGATCTGGACGGTTCCACCACCCTGG ACATGGGCCAGGAGAAGCCCACCAGCAGCAGCAGCGGTCTCAGTGGAGGC TTCAAGTCGGAGTCGTCGGTGGTGCTGCCCGGCATGCTGCAAAATTCAGG CTGCCCGCTGACGACGAGTTCCCACTGCCTGCGCTGCAACAAGGTGGGCT GCATCAAGTGCCCAATGTACCTGGTGACGGACACGAGGCAGTGCGTGGAT CAGTGCCCCGCCGGCTACTTGGACCAGTGGTCCGCCCACACGGAGTTCAT GGGTCGGGTGTGTGTACCCACCGGCTATTCTGGGCCACTGATGGCCGCAC TGGCCGGACTTCTCGGTGGCTTCCTCGTTTGCCTGTCCCTTCTGGCTGTC GCCGTGATGCTGGTCAAGAGGAAGAGGCGGCGAAAGTCCATCAAACAGAA GCTCATCAACGAGAACACCATGGATCGGGCGGACTTCATGAGGCAGCTAA ACGAGATGCGTCCGAATGCGGAGTACTTTCTGGCCATGCTGAACGATACC CGGCGGCAGATCAGGAAGCTCTATTTGTCGGGTGAAGTGGCGGCTGCCAA CTCGTACAGGCCCATCGTCCGGGATCTGGCAAAGCTGCTGATTCTGCTAA ACAGGCCCATTGAACTGATTCCCGCCCCGCCGCCAGATTGGTCCAGGCTG TATGCCTGGTCGGAGCAGGCCCTGGAGCGTTACAAGCCGCAGGTGGGCCA GCTTATCGACTTCTTTCAGGCCTCACACGGTCACAGTGCTGGCCACCACG AGGTGCTCTACGCTGCGCCGAACAAGAAGAAGCAACTGCAGCAGCCCAGC ATCTTCCGGCAACAGGTGACGCCCACGGCGACGCCGCAGGGAGTGGGCGA ACTGATGGCCGGCGATCGGAGCAGCAGTGCCTCGGCGCAGCAGAAGCTAC ACCTGTTTGGCTCGCTGATCAGCCTGCACGAGTTCGAGGAGCCGCGGGCT TCGGATCCTTTCGGCAGCAGTTTCAACACGCTGAAGAGCGGCAATCTCAT CTCTGATCTCAACGCCAGCTCGCTGTGGCTGGAGGACGAGTTCTACAAGC TGGGCTTTCGACCGCAGGACGAGATCACCACGGAGCTGTAACCGCATCAC AAAACTCATACTCAAAACTTAATGCAAACTAAGTATTACCCCGGCTGGCG GCGCTAGCCGTTCGAGTCTAGCGCCAGTTCAGCTGGGGGAATGGAGCATT TGCGTGCACATTCCGACAGGCCATCATCGACTTCGACTTCATCGACAAGC TAACTGGGAGGCCGTTTAGCCGGAGCCGCTAAATGCCCACGCTTAGAGCT TAGTTAGATCAGTTAAGCAAGCAAACTAGTCACGTAAAATCACAAACAAA ACCATCAACACACAACGATGCCGAGGAGAAGGAGCTAATGCAAATGCAAA TGGAAATCGCGTGGAAATGAATTTAGTTTTATGGATTTTACAAAAATCGC AACAATCATGTAACGAACAATATTCAATATACACACTATAGAAATACTAT TCAGATAATAACTAAGATGATTAGCAGTATAAACGCGATACTTATAGCTA TAGCTTATGTAGACAGAGATTATAAACCTTAGCGAATACGAAATGGATAA TAAAATCGTGTGCCTTAGGATTGTAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
T48-RA | 2493 | T48-RA | 471..2106 | 2..1637 | 8165 | 99.9 | Plus |
T48.a | 2201 | T48.a | 188..1823 | 2..1637 | 8165 | 99.9 | Plus |
T48-RA | 2493 | T48-RA | 2102..2488 | 1642..2028 | 1935 | 100 | Plus |
T48.a | 2201 | T48.a | 1819..2201 | 1642..2024 | 1915 | 100 | Plus |
Ets97D-RA | 1925 | Ets97D-RA | 1705..1925 | 2028..1808 | 1105 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 26650304..26651444 | 497..1637 | 5690 | 99.9 | Plus |
3R | 31820162 | 3R | 26624557..26625055 | 2..500 | 2495 | 100 | Plus |
3R | 31820162 | 3R | 26651440..26651826 | 1642..2028 | 1935 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 7752..7804 | 759..812 | 114 | 70.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 22706853..22707351 | 1..499 | 99 | -> | Plus |
chr3R | 22732563..22734087 | 500..2024 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
T48-RA | 1..1260 | 232..1491 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
T48-RA | 1..1260 | 232..1491 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
T48-RA | 1..1260 | 232..1491 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
T48-RA | 1..1260 | 232..1491 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
T48-RA | 1..1260 | 232..1491 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
T48-RA | 429..2443 | 1..2024 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
T48-RA | 429..2443 | 1..2024 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
T48-RA | 429..2443 | 1..2024 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
T48-RA | 429..2443 | 1..2024 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
T48-RA | 429..2443 | 1..2024 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26883725..26884223 | 1..499 | 99 | -> | Plus |
3R | 26909476..26910991 | 500..2024 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26883725..26884223 | 1..499 | 99 | -> | Plus |
3R | 26909476..26910991 | 500..2024 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26883725..26884223 | 1..499 | 99 | -> | Plus |
3R | 26909476..26910991 | 500..2024 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 22709447..22709945 | 1..499 | 99 | -> | Plus |
arm_3R | 22735198..22736713 | 500..2024 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26624556..26625054 | 1..499 | 99 | -> | Plus |
3R | 26650307..26651822 | 500..2024 | 99 | Plus |
Translation from 231 to 1490
> GM18993.pep MRSVEVAQSGPSAIFWLVQVLIVGAAQAATPFAKEYRNAGLYNGNTLVDL DGSTTLDMGQEKPTSSSSGLSGGFKSESSVVLPGMLQNSGCPLTTSSHCL RCNKVGCIKCPMYLVTDTRQCVDQCPAGYLDQWSAHTEFMGRVCVPTGYS GPLMAALAGLLGGFLVCLSLLAVAVMLVKRKRRRKSIKQKLINENTMDRA DFMRQLNEMRPNAEYFLAMLNDTRRQIRKLYLSGEVAAANSYRPIVRDLA KLLILLNRPIELIPAPPPDWSRLYAWSEQALERYKPQVGQLIDFFQASHG HSAGHHEVLYAAPNKKKQLQQPSIFRQQVTPTATPQGVGELMAGDRSSSA SAQQKLHLFGSLISLHEFEEPRASDPFGSSFNTLKSGNLISDLNASSLWL EDEFYKLGFRPQDEITTEL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16462-PA | 408 | GF16462-PA | 4..408 | 10..419 | 1895 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11509-PA | 418 | GG11509-PA | 1..418 | 1..419 | 2184 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14059-PA | 427 | GH14059-PA | 14..427 | 21..419 | 1629 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
T48-PB | 419 | CG5507-PB | 1..419 | 1..419 | 2173 | 100 | Plus |
T48-PA | 419 | CG5507-PA | 1..419 | 1..419 | 2173 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24435-PA | 429 | GI24435-PA | 22..429 | 30..419 | 1641 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27229-PA | 410 | GL27229-PA | 4..410 | 14..419 | 1836 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18936-PA | 410 | GA18936-PA | 4..410 | 14..419 | 1841 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10351-PA | 419 | GM10351-PA | 1..419 | 1..419 | 2230 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21313-PA | 417 | GD21313-PA | 1..417 | 1..419 | 2206 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10709-PA | 417 | GJ10709-PA | 4..417 | 17..419 | 1713 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22606-PA | 412 | GK22606-PA | 4..412 | 15..419 | 1698 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23699-PA | 419 | GE23699-PA | 1..419 | 1..419 | 2169 | 96.9 | Plus |
Translation from 231 to 1490
> GM18993.hyp MRSVEVAQSGPSAIFWLVQVLIVGAAQAATPFAKEYRNAGLYNGNTLVDL DGSTTLDMGQEKPTSSSSGLSGGFKSESSVVLPGMLQNSGCPLTTSSHCL RCNKVGCIKCPMYLVTDTRQCVDQCPAGYLDQWSAHTEFMGRVCVPTGYS GPLMAALAGLLGGFLVCLSLLAVAVMLVKRKRRRKSIKQKLINENTMDRA DFMRQLNEMRPNAEYFLAMLNDTRRQIRKLYLSGEVAAANSYRPIVRDLA KLLILLNRPIELIPAPPPDWSRLYAWSEQALERYKPQVGQLIDFFQASHG HSAGHHEVLYAAPNKKKQLQQPSIFRQQVTPTATPQGVGELMAGDRSSSA SAQQKLHLFGSLISLHEFEEPRASDPFGSSFNTLKSGNLISDLNASSLWL EDEFYKLGFRPQDEITTEL*