GM19936.complete Sequence
519 bp (519 high quality bases) assembled on 2002-11-19
GenBank Submission: BT003597
> GM19936.complete
ATCGCCTGGACGAAAAGAAGACGCCGGCAAAAAGAAGCGAAAATTTGTTT
AACTCAAATTAAGTCGTCGGAAATCAGCAAAAATGTCGTTCAAAGGAAAT
CCCAAGGTGCAGAAGGTGATGGTGCAGCCCATCAACCTGATCTTCCGTTA
CCTGCAGAACCGGTCCCGCGTGCAAGTTTGGTTATACGAGAACATATCGC
TGCGCATCGAGGGCCACATTGTGGGATTCGATGAGTACATGAATCTGGTG
CTGGACGACGCCGAGGAAGTCTATGTGAAGACCCGGCAGCGCCGCAACCT
CGGGAGGATCATGCTCAAGGGCGACAACATCACGCTCATACAGAACGTCA
GTCCCACGAAGGACTAGGCGACTCAGCGGCCATCCTGCGAATCCTTCGAA
TTCCACCTGCAAACGCTGAACGCCCTTAATATAAGTAAAATAAATGTAAA
GCCGATATCTGAAGACGAATGTTGAAATAAATGGTAGACTTTCTGTAAAA
AAAAAAAAAAAAAAAAAAA
GM19936.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:32:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18591-RA | 494 | CG18591-RA | 1..494 | 1..494 | 2470 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:31:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 7883967..7884462 | 496..1 | 2480 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:25:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:31:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7884928..7885425 | 498..1 | 2490 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:07:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7884928..7885425 | 498..1 | 2490 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 15:31:36 has no hits.
GM19936.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:32:21 Download gff for
GM19936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 7883967..7884462 | 1..496 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:09:54 Download gff for
GM19936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18591-RA | 1..285 | 83..367 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:03:35 Download gff for
GM19936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmE-RA | 1..285 | 83..367 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:32:03 Download gff for
GM19936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmE-RA | 1..285 | 83..367 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:53:51 Download gff for
GM19936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18591-RA | 1..285 | 83..367 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:09:19 Download gff for
GM19936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmE-RA | 1..285 | 83..367 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:22:13 Download gff for
GM19936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18591-RA | 1..494 | 1..494 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:03:35 Download gff for
GM19936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmE-RA | 1..494 | 1..494 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:32:03 Download gff for
GM19936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmE-RA | 26..521 | 1..496 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:53:51 Download gff for
GM19936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18591-RA | 1..494 | 1..494 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:09:19 Download gff for
GM19936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmE-RA | 26..521 | 1..496 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:32:21 Download gff for
GM19936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7884930..7885425 | 1..496 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:32:21 Download gff for
GM19936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7884930..7885425 | 1..496 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:32:21 Download gff for
GM19936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7884930..7885425 | 1..496 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:32:03 Download gff for
GM19936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7884930..7885425 | 1..496 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:26:03 Download gff for
GM19936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7884930..7885425 | 1..496 | 100 | | Minus |
GM19936.hyp Sequence
Translation from 82 to 366
> GM19936.hyp
MSFKGNPKVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFD
EYMNLVLDDAEEVYVKTRQRRNLGRIMLKGDNITLIQNVSPTKD*
GM19936.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:46:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SmE-PA | 94 | CG18591-PA | 1..94 | 1..94 | 482 | 100 | Plus |
GM19936.pep Sequence
Translation from 82 to 366
> GM19936.pep
MSFKGNPKVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFD
EYMNLVLDDAEEVYVKTRQRRNLGRIMLKGDNITLIQNVSPTKD*
GM19936.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:47:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SmE-PA | 94 | CG18591-PA | 1..94 | 1..94 | 482 | 100 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 19:15:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA15004-PB | 94 | GA15004-PB | 1..94 | 1..94 | 474 | 95.7 | Plus |