BDGP Sequence Production Resources |
Search the DGRC for GM20958
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 209 |
Well: | 58 |
Vector: | pOT2 |
Associated Gene/Transcript | CG33964-RA |
Protein status: | GM20958.pep: gold |
Preliminary Size: | 426 |
Sequenced Size: | 2308 |
Gene | Date | Evidence |
---|---|---|
CG13175 | 2002-01-01 | Sim4 clustering to Release 2 |
CG33154 | 2002-06-13 | Blastp of sequenced clone |
CG33154 | 2003-01-01 | Sim4 clustering to Release 3 |
CG33964 | 2008-04-29 | Release 5.5 accounting |
CG33964 | 2008-08-15 | Release 5.9 accounting |
CG13175 | 2008-08-15 | Release 5.9 accounting |
CG13175 | 2008-12-18 | 5.12 accounting |
CG33964 | 2008-12-18 | 5.12 accounting |
2308 bp (2308 high quality bases) assembled on 2002-06-13
GenBank Submission: BT003595
> GM20958.complete AATCACATTTCGGGTAAAAACAAATTGAAATATCCACCGAATTTAAATAT TAAAGTTAGAGAAGCTGCCAAATATCTGGAGTTACAATCAGGGACAAGGA CAAGGACTACTACACTAGAGGAGAGCTTTTACAAGCAATCCGGTGAAACC ACATATAATGACAAGTCCGTCGCGGGATATAAACGATCTTTTTGACGATA TTGTCCTGACCGAGGAGAAGGAGGCACGTTTGGGCTACGAGGAGGGACTG AAGGACGGCCAGGAGCAGGGCAACGAAGAGGGCTATAAATTGGGCTACGC CCAGGGAGTATCCCTAGGCGAGGAGCTCGGCAAGATTCTGGGCCAGGTGG TGGCCCAGCAGCAGCTGAAACACACGGACAAGGTGCGTCGCAGCTTGGAA CAGTTGCGTTCGCTCATCGAGGAGTTTCCCCGCACCAACGATCCGCAGGC GGACATAGTGGGTGCTGTGCAGGACATTCGCTCCTCCCATCGTCGCCTTC GCGCCCAGCTGGGATCCAAAAAAACGCCTGGTGCAGCGCCTGCAGAGACC AATTCTGTCGAGCACAAGGACTACAGCTTCTAGCCTTATAGCACCATGTC CAAGGTGGGAGTTGTGCAGTTGCAGAGGCGTCTGGATGGCTTACTGGCCT TCCTCAATCCGCACTGGGATTTTGTCAATTGCCACATGGTGAACTACTTG ACGGACCAGCACTGGGACGGCTTTTTATCCGAAACGCTGAAAAGTGAGAT CGCCGGCAAGGAAGATGTGGCTCTGGCCATAGAAGACCTATTTTGGAAAA CTGATGAATCAGAAAGGTTTCCGGCATGGCGAGAATTCCTAGGCAAGAGC AAACAAGAACGCCTGTCGCTTCATCCGAAACTCCTGACCAGCGTGGAGGA ACTTATCGAGGGTCAGGGGAACTCCACGCAGCTAAGCATTCGGGAGTTTA TGAGCGCCAAAAAGTGCCATGAGGTGGATCTAACAGCCGTTCTCGTGGAC CAGCTTGTGAAGAACTCCGGTCAAGATTGCTTCATTGTAGACGCGGGCGA TGGCAAAGGGTATTTATCCTCGCGCTTGGCGCTCCAGTATGGTCACCGCG TGCTCGGCATCGATGCGAACGCGGCAAACACCGAGAACGCATTGAATAGG AATCGCAAATTGCAGCGCGCTTGGAATGGCCTTACGGAACGAGCGGAGCT GCAAGTCCAGGGAATCACGCCCAAGAGACGTAGTAAAAAGTCGCCAGCCA GGGAGAGCACCAAGAGTGCGCCTGCCTTGGAAAACTACAAGACAACGGCA AAGTTTATAACCACCGAACTTAACTTTGGTGCCCTGCTGGCGGAGAATTT CACTCAGTTTAGACCGGAAGACAGTCCAAACATTTGCCTTACTGGATTGC ATACCTGTGGCAACCTGGCCGCCACCTGTCTTCAGGTTTTCCACGCCCAA ACGGACTGCCGGTTGCTTTGTAATGTTGGCTGCTGCTATCATTTGCTGCG GGAGCGCTATTCGCAGCAGGAGTTCTTTGGCAATAAGTCCCTGATGGAGC TGCAAACAGACTATGGATTCCCATTGAGTCAGTACCTGCGGGAGCGACAA GTGCGAATGGGTCGCAATGCGCGGATGCTGGCGGCCCAGTCAATTGAACG CACCTTGGACACCAAGGAGCTGCCTAATGTAACGCTCTACTATCGAGCTC TCTTGGAGATTCTGGTTTGCCGCCATGCGCCGGAGCTGAAAAACGAACTG CAGGTGGGCAAGGTACGGAAATTCGAGAGTTTCGAGGAGTACATTCAAAA GTGTGCCACCAAATTGGATGCTCCCTGGTTGGCAGCTGTTGAGAAAGAAG AACTTCAATCCCTGCTCCAGGAATATGCCGTGCATAAATACTTCTTGGAT CTGTTCTATCTGCTGCGCATGTCCTTTGCTCCGGTGCTGGAGAGTCTAAT TCTCCTGGATCGCCTGCTCTACCTCAAGGAACTTGGCTATGAACGCAGCT ATCTGATAGATTTATTTGATCCCGTCATTTCGCCCAGGCATTTTGCAATT GTTTCTATAAAGCAGCAAACGCAACAATAATGAAATTCACAAATGCATCA AAAGCTTGACGAGAAAGCCGGTTGTGTTTAATTATTTATAGATTATAGCG TGCAATACTTTTCATATCGTATATGTATTGCTTATGTATGTAACGCTTTT AAAAATCTAACTAAACCATAGCACACAAAAAGTAAATAAGGTTGTTAAAA CTAAGAATCATTATAATAAATGTAATCATGACTTGTAAAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 8071600..8072721 | 1158..2286 | 5460 | 99.1 | Plus |
chr2R | 21145070 | chr2R | 8069854..8070726 | 1..873 | 4365 | 100 | Plus |
chr2R | 21145070 | chr2R | 8070852..8071045 | 972..1165 | 970 | 100 | Plus |
chr2R | 21145070 | chr2R | 8070727..8070794 | 908..975 | 340 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12184385..12185508 | 1158..2288 | 5470 | 99.1 | Plus |
2R | 25286936 | 2R | 12182639..12183511 | 1..873 | 4365 | 100 | Plus |
2R | 25286936 | 2R | 12183637..12183830 | 972..1165 | 970 | 100 | Plus |
2R | 25286936 | 2R | 12183512..12183579 | 908..975 | 340 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12185584..12186607 | 1158..2181 | 5090 | 99.8 | Plus |
2R | 25260384 | 2R | 12183838..12184710 | 1..873 | 4365 | 100 | Plus |
2R | 25260384 | 2R | 12184836..12185029 | 972..1165 | 970 | 100 | Plus |
2R | 25260384 | 2R | 12186610..12186707 | 2191..2288 | 490 | 100 | Plus |
2R | 25260384 | 2R | 12184711..12184778 | 908..975 | 340 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 4290..4394 | 1..109 | 148 | 62.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 8069854..8070726 | 1..873 | 100 | == | Plus |
chr2R | 8070727..8070792 | 908..973 | 100 | -> | Plus |
chr2R | 8070854..8071045 | 974..1165 | 100 | -> | Plus |
chr2R | 8071608..8072721 | 1166..2286 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33964-RA | 1..278 | 596..873 | 100 | == | Plus |
CG33964-RA | 279..1451 | 908..2080 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33964-RA | 1..278 | 596..873 | 100 | == | Plus |
CG33964-RA | 279..1451 | 908..2080 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33964-RA | 1..278 | 596..873 | 100 | == | Plus |
CG33964-RA | 279..1451 | 908..2080 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33964-RA | 1..278 | 596..873 | 100 | == | Plus |
CG33964-RA | 279..1451 | 908..2080 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33964-RA | 1..278 | 596..873 | 100 | == | Plus |
CG33964-RA | 279..1451 | 908..2080 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33964-RA | 874..2245 | 908..2286 | 99 | Plus | |
CG33964-RA | 1..873 | 1..873 | 100 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33964-RA | 1..873 | 1..873 | 100 | == | Plus |
CG33964-RA | 874..2245 | 908..2286 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13175-RA | 1..873 | 1..873 | 100 | == | Plus |
CG13175-RA | 874..2245 | 908..2286 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33964-RA | 1..873 | 1..873 | 100 | == | Plus |
CG33964-RA | 874..2245 | 908..2286 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13175-RA | 1..873 | 1..873 | 100 | == | Plus |
CG13175-RA | 874..2245 | 908..2286 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12182639..12183511 | 1..873 | 100 | == | Plus |
2R | 12183512..12183577 | 908..973 | 100 | -> | Plus |
2R | 12183639..12183830 | 974..1165 | 100 | -> | Plus |
2R | 12184393..12185506 | 1166..2286 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12182639..12183511 | 1..873 | 100 | == | Plus |
2R | 12183512..12183577 | 908..973 | 100 | -> | Plus |
2R | 12183639..12183830 | 974..1165 | 100 | -> | Plus |
2R | 12184393..12185506 | 1166..2286 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12182639..12183511 | 1..873 | 100 | == | Plus |
2R | 12183512..12183577 | 908..973 | 100 | -> | Plus |
2R | 12183639..12183830 | 974..1165 | 100 | -> | Plus |
2R | 12184393..12185506 | 1166..2286 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 8070144..8071016 | 1..873 | 100 | == | Plus |
arm_2R | 8071017..8071082 | 908..973 | 100 | -> | Plus |
arm_2R | 8071144..8071335 | 974..1165 | 100 | -> | Plus |
arm_2R | 8071898..8073011 | 1166..2286 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12183838..12184710 | 1..873 | 100 | == | Plus |
2R | 12184711..12184776 | 908..973 | 100 | -> | Plus |
2R | 12184838..12185029 | 974..1165 | 100 | -> | Plus |
2R | 12185592..12186705 | 1166..2286 | 99 | Plus |
Translation from 595 to 2079
> GM20958.pep MSKVGVVQLQRRLDGLLAFLNPHWDFVNCHMVNYLTDQHWDGFLSETLKS EIAGKEDVALAIEDLFWKTDESERFPAWREFLGKSKQERLSLHPKLLTSV EELIEGQGNSTQLSIREFMSAKKCHEVDLTAVLVDQLVKNSGQDCFIVDA GDGKGYLSSRLALQYGHRVLGIDANAANTENALNRNRKLQRAWNGLTERA ELQVQGITPKRRSKKSPARESTKSAPALENYKTTAKFITTELNFGALLAE NFTQFRPEDSPNICLTGLHTCGNLAATCLQVFHAQTDCRLLCNVGCCYHL LRERYSQQEFFGNKSLMELQTDYGFPLSQYLRERQVRMGRNARMLAAQSI ERTLDTKELPNVTLYYRALLEILVCRHAPELKNELQVGKVRKFESFEEYI QKCATKLDAPWLAAVEKEELQSLLQEYAVHKYFLDLFYLLRMSFAPVLES LILLDRLLYLKELGYERSYLIDLFDPVISPRHFAIVSIKQQTQQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12827-PA | 492 | GF12827-PA | 1..490 | 1..492 | 2049 | 77.5 | Plus |
Dana\GF13650-PA | 444 | GF13650-PA | 7..442 | 26..491 | 218 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20255-PA | 492 | GG20255-PA | 1..489 | 1..489 | 2313 | 89.8 | Plus |
Dere\GG23319-PA | 465 | GG23319-PA | 115..431 | 119..464 | 196 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22793-PA | 497 | GH22793-PA | 4..496 | 5..489 | 1701 | 68.4 | Plus |
Dgri\GH20605-PA | 462 | GH20605-PA | 30..461 | 19..489 | 242 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33964-PA | 494 | CG33964-PA | 1..494 | 1..494 | 2564 | 100 | Plus |
CG2906-PE | 364 | CG2906-PE | 26..363 | 122..489 | 212 | 25.9 | Plus |
CG2906-PD | 456 | CG2906-PD | 118..455 | 122..489 | 212 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20589-PA | 495 | GI20589-PA | 1..494 | 1..490 | 1634 | 64.4 | Plus |
Dmoj\GI20447-PA | 454 | GI20447-PA | 92..403 | 122..464 | 239 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10807-PA | 494 | GL10807-PA | 4..491 | 5..489 | 1967 | 75.2 | Plus |
Dper\GL11477-PA | 470 | GL11477-PA | 119..458 | 119..489 | 226 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17328-PA | 494 | GA17328-PA | 4..491 | 5..489 | 1952 | 74.8 | Plus |
Dpse\GA15509-PA | 470 | GA15509-PA | 119..458 | 119..489 | 235 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21342-PA | 494 | GM21342-PA | 1..494 | 1..494 | 2420 | 93.1 | Plus |
Dsec\GM20996-PA | 456 | GM20996-PA | 115..455 | 119..489 | 209 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15405-PA | 494 | GD15405-PA | 1..494 | 1..494 | 2432 | 93.9 | Plus |
Dsim\GD15402-PA | 191 | GD15402-PA | 1..190 | 1..190 | 955 | 93.7 | Plus |
Dsim\GD10527-PA | 456 | GD10527-PA | 115..455 | 119..489 | 208 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20770-PA | 493 | GJ20770-PA | 1..492 | 1..489 | 1654 | 64.2 | Plus |
Dvir\GJ20117-PA | 436 | GJ20117-PA | 119..433 | 119..464 | 228 | 25.7 | Plus |
Translation from 825 to 2045
> GM20958.hyp MARIPRQEQTRTPVASEGQGNSTQLSIREFMSAKKCHEVDLTAVLVDQLV KNSGQDCFIVDAGDGKGYLSSRLALQYGHRVLGIDANAANTENALNRNRK LQRAWNGLTERAELQVQGITPKRRGKKSPARESTKSAPALENYKTTAKFI TTELNFGALLAENFTQFRPEDSPNICLTGLHTCGNLAATCLQVFHAQTDC RLLCNVGCCYHLLRERYSQQEFFGNKSLMELQTDYGFPLSQYLRERQVRM GRNARMLAAQSIERTLDTKELPNVTLYYRALLEILVCRHAPELKNELQVG KVRKFESFEEYIQKCATKLDAPWLAAVEKEELQSLLQEYAVHKYFLDLFY LLRMSFAPVLESLILLDRLLYLKELGYERSYLIDLFDPVISPRHFAIVSI KQQTQQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33964-PA | 494 | CG33964-PA | 105..494 | 17..406 | 2009 | 99.7 | Plus |
CG2906-PE | 364 | CG2906-PE | 26..363 | 34..401 | 211 | 25.9 | Plus |
CG2906-PD | 456 | CG2906-PD | 118..455 | 34..401 | 211 | 25.9 | Plus |