BDGP Sequence Production Resources |
Search the DGRC for GM21055
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 210 |
Well: | 55 |
Vector: | pOT2 |
Associated Gene/Transcript | CG13902-RB |
Protein status: | GM21055.pep: gold |
Preliminary Size: | 1185 |
Sequenced Size: | 1388 |
Gene | Date | Evidence |
---|---|---|
CG13902 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13902 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13902 | 2003-01-22 | Blastp of sequenced clone |
CG13902 | 2008-04-29 | Release 5.5 accounting |
CG13902 | 2008-08-15 | Release 5.9 accounting |
CG13902 | 2008-12-18 | 5.12 accounting |
1388 bp (1388 high quality bases) assembled on 2003-01-22
GenBank Submission: BT003596
> GM21055.complete CTGAATGTAAGCTAAAAGGTAAACAAATAATAGTTGTTTAACATTCTATG GATAGTGAGTTCCTGGAGCTGACGCAGCTGCTGCCCCGCTGGGTGGATCT GGAAAATGTGGTCCGTGGTGAAGTCGAGGCGCGCTACATACTCAAAAGAG CCGCGGATCACCTGGCGAACTTGAGGTCTGGCGGAGATTCCGGGGCGGAG GAAACCGGATATCTGGTAGGTGCGCTGGTGGACAGGAACTGGGAACGCAT TCACACAGGGCACTTCAGCCAGGTTCCCTTGGTCACGAGGAAGATATACG CCATAGCCTGTTGCTTCAAGATTTTTTTCCTTCTCTTGGAGAGCACTAGT CCCGCCCAGAAGGATGCGTGCAGTGAGATCCTCGATGAGGCTCAACTTTT GGGTTGCATGGAGGATTGGAGTGAACTGAAAGTCGCCCTAATGGATTATC TCGACAAGGATGGAGCAGTAGCACTGAATTCCGCACCACTTCCAACTCTA GAGCCATTAACCCGAGTAACCTCCAACTGTGATATACCCCAACTGGACGC TCCCAGTCTAGAAGAGTTCCAGACAAAGTGCTTTGAGGCAGGACAACCCA CACTCCTGCTCAACACCATCCAGCATTGGCCTGCACTGCACAAATGGCTG GATCTCAATTACCTTCTCCAAGTGGCCGGGAATCGCACGGTGCCCATTGA AATAGGTTCCAACTATGCCAGCGATGAATGGTCCCAGCAGCTGGTGAAGA TCCGCGACTTCCTGAGCAGACAATTCGGAAAGGAACCAAGCAAGGCTGGC CAAAATATCGAGTATCTCGCTCAGCACGAGCTCTTCGCCCAGATACCAGC CCTCAAAGAGGATATATCCATTCCCGACTACTGCACCATCAGCAACGAAG ATACCCCAGGAGCTGTGGACATCAAAGCCTGGCTGGGACCAGCTGGAACC GTATCTCCCATGCACTACGATCCCAAGCACAACTTGCTGTGCCAGGTATT CGGTTCGAAGAGGATCATCCTAGCTGCTCCTGCAGACACAGACAATCTGT ATCCCCACGACAGTGAGTTTTTGGCCAATACAGCGCGAATAGATGCTGCT CAACTGGATCCTGAAACATATCCCTTGGTAGCCAAGGTGAAGTTCTACCA GCTGCTCCTGCAACCTGGTGACTGTTTGTACATGCCACCCAAATGGTGGC ACTATGTGAGATCTGAAGCTCCTAGCTTCTCTGTAAGCTTCTGGTGGGAG TAAGCATTTTAATGCAGTTTATTGAACAGCAAATTTATGTAGGATGATCT CTGTTCAAGTTAAGATTAAAGTATGCACTGCAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X-element | 4740 | X-element ROXELEMENT 4740bp | 2195..2233 | 554..592 | 123 | 79.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 839765..840775 | 321..1331 | 98 | <- | Minus |
chr3L | 840827..841146 | 1..320 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13902-RA | 1..263 | 48..310 | 100 | == | Plus |
CG13902-RA | 264..1185 | 331..1253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13902-RB | 1..1206 | 48..1253 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13902-RB | 1..1206 | 48..1253 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13902-RA | 1..263 | 48..310 | 100 | == | Plus |
CG13902-RA | 264..1185 | 331..1253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13902-RB | 1..1206 | 48..1253 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13902-RA | 1..310 | 1..310 | 100 | == | Plus |
CG13902-RA | 311..1310 | 331..1331 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13902-RB | 1..1331 | 1..1331 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13902-RB | 1..1330 | 2..1331 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13902-RA | 1..310 | 1..310 | 100 | == | Plus |
CG13902-RA | 311..1310 | 331..1331 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13902-RB | 1..1330 | 2..1331 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 839980..840990 | 321..1331 | 100 | <- | Minus |
3L | 841042..841361 | 1..320 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 839980..840990 | 321..1331 | 100 | <- | Minus |
3L | 841042..841361 | 1..320 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 839980..840990 | 321..1331 | 100 | <- | Minus |
3L | 841042..841361 | 1..320 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 839980..840990 | 321..1331 | 100 | <- | Minus |
arm_3L | 841042..841361 | 1..320 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 839980..840990 | 321..1331 | 100 | <- | Minus |
3L | 841042..841361 | 1..320 | 100 | Minus |
Translation from 47 to 1252
> GM21055.hyp MDSEFLELTQLLPRWVDLENVVRGEVEARYILKRAADHLANLRSGGDSGA EETGYLVGALVDRNWERIHTGHFSQVPLVTRKIYAIACCFKIFFLLLEST SPAQKDACSEILDEAQLLGCMEDWSELKVALMDYLDKDGAVALNSAPLPT LEPLTRVTSNCDIPQLDAPSLEEFQTKCFEAGQPTLLLNTIQHWPALHKW LDLNYLLQVAGNRTVPIEIGSNYASDEWSQQLVKIRDFLSRQFGKEPSKA GQNIEYLAQHELFAQIPALKEDISIPDYCTISNEDTPGAVDIKAWLGPAG TVSPMHYDPKHNLLCQVFGSKRIILAAPADTDNLYPHDSEFLANTARIDA AQLDPETYPLVAKVKFYQLLLQPGDCLYMPPKWWHYVRSEAPSFSVSFWW E*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13902-PB | 401 | CG13902-PB | 1..401 | 1..401 | 2139 | 100 | Plus |
CG13902-PC | 394 | CG13902-PC | 1..394 | 1..401 | 2088 | 98.3 | Plus |
CG10133-PA | 316 | CG10133-PA | 31..294 | 169..401 | 204 | 24.7 | Plus |
Translation from 47 to 1252
> GM21055.pep MDSEFLELTQLLPRWVDLENVVRGEVEARYILKRAADHLANLRSGGDSGA EETGYLVGALVDRNWERIHTGHFSQVPLVTRKIYAIACCFKIFFLLLEST SPAQKDACSEILDEAQLLGCMEDWSELKVALMDYLDKDGAVALNSAPLPT LEPLTRVTSNCDIPQLDAPSLEEFQTKCFEAGQPTLLLNTIQHWPALHKW LDLNYLLQVAGNRTVPIEIGSNYASDEWSQQLVKIRDFLSRQFGKEPSKA GQNIEYLAQHELFAQIPALKEDISIPDYCTISNEDTPGAVDIKAWLGPAG TVSPMHYDPKHNLLCQVFGSKRIILAAPADTDNLYPHDSEFLANTARIDA AQLDPETYPLVAKVKFYQLLLQPGDCLYMPPKWWHYVRSEAPSFSVSFWW E*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25024-PA | 397 | GF25024-PA | 1..397 | 1..401 | 1612 | 75.3 | Plus |
Dana\GF10950-PA | 315 | GF10950-PA | 30..294 | 168..401 | 189 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14633-PA | 401 | GG14633-PA | 1..401 | 1..401 | 1970 | 91.5 | Plus |
Dere\GG13765-PA | 316 | GG13765-PA | 31..294 | 169..401 | 197 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16027-PA | 407 | GH16027-PA | 8..407 | 5..401 | 1452 | 68.9 | Plus |
Dgri\GH14673-PA | 315 | GH14673-PA | 31..297 | 167..401 | 187 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
JMJD5-PB | 401 | CG13902-PB | 1..401 | 1..401 | 2139 | 100 | Plus |
JMJD5-PC | 394 | CG13902-PC | 1..394 | 1..401 | 2088 | 98.3 | Plus |
JMJD7-PA | 316 | CG10133-PA | 31..294 | 169..401 | 204 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12291-PA | 399 | GI12291-PA | 7..399 | 7..401 | 1406 | 67.8 | Plus |
Dmoj\GI13783-PA | 320 | GI13783-PA | 33..296 | 169..401 | 193 | 25.1 | Plus |
Dmoj\GI22022-PA | 401 | GI22022-PA | 129..240 | 291..399 | 155 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16337-PA | 398 | GL16337-PA | 5..398 | 8..400 | 1538 | 73 | Plus |
Dper\GL25429-PA | 321 | GL25429-PA | 24..294 | 163..401 | 194 | 26.2 | Plus |
Dper\GL13765-PA | 398 | GL13765-PA | 34..237 | 196..399 | 156 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12613-PA | 398 | GA12613-PA | 5..398 | 8..400 | 1524 | 72.7 | Plus |
Dpse\GA10099-PA | 321 | GA10099-PA | 24..294 | 163..401 | 204 | 26.5 | Plus |
Dpse\GA11879-PA | 398 | GA11879-PA | 34..237 | 196..399 | 156 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14248-PA | 401 | GM14248-PA | 1..401 | 1..401 | 2061 | 95.8 | Plus |
Dsec\GM24589-PA | 316 | GM24589-PA | 31..294 | 169..401 | 200 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13505-PA | 401 | GD13505-PA | 1..401 | 1..401 | 2019 | 93.8 | Plus |
Dsim\GD12657-PA | 316 | GD12657-PA | 31..294 | 169..401 | 201 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13228-PA | 409 | GJ13228-PA | 4..409 | 1..401 | 1437 | 67 | Plus |
Dvir\GJ13585-PA | 320 | GJ13585-PA | 33..296 | 169..401 | 190 | 26.2 | Plus |