BDGP Sequence Production Resources |
Search the DGRC for GM25741
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 257 |
Well: | 41 |
Vector: | pOT2 |
Associated Gene/Transcript | CG2453-RA |
Protein status: | GM25741.pep: gold |
Preliminary Size: | 906 |
Sequenced Size: | 1188 |
Gene | Date | Evidence |
---|---|---|
CG2453 | 2002-01-01 | Sim4 clustering to Release 2 |
CG2453 | 2002-06-13 | Blastp of sequenced clone |
CG2453 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2453 | 2008-04-29 | Release 5.5 accounting |
CG2453 | 2008-08-15 | Release 5.9 accounting |
CG2453 | 2008-12-18 | 5.12 accounting |
1188 bp (1188 high quality bases) assembled on 2002-06-13
GenBank Submission: AY122141
> GM25741.complete CGGAAAGCACCTAAGAATCAACAAAATGCAAACTACGAGGAGCACCCGGC TGCTGTCCTTGGCCAGGAGATTCGTCCACACCCGAACGGCATCTCAATCG GCCCAGAACTCCAAAGGAATGGCAAGTGGCGCGGAATCCATCTCCGGAAA GGAGAAAACCACACATTTCGGCTTCCAAACAGTTCGGGAAAGTGAAAAGG AACAAAAGGTTCACGAGGTCTTCGAACAGGTGGCCAACTCCTATGACGTG ATGAACGATGCCATGTCCCTGGGCATCCATCGCGTGTGGAAGGATGTGTT CGTCGAACGACTGGGTCCCACGCACGGTATGCGCTTGCTGGACATGGCTG GCGGCACCGGGGACATCACCTTCCGCTACCTGCGTTATCTGAACAACCAG CCGAATCCCCAACAGCGTCCCAGCCACGTCACTGTGTCGGACATCAACCA GCACATGCTAAACGTGGGCGAGGAGCGGGCCAAGAGGCTGGGACTTACCA CCGACCAGCTGTCCAACTGCACCGTCGCATGGCAGTGCGCCGATGCCGAG AAGTTGCCCTTCCCGGACGCTAGCTTTACGGCCTACACTATTGCCTTTGG CATCAGGAACTGCACACATGTGGATAAGGTTCTTTCTGAAGCGTATCGAG TGCTGCAGCCGGGCGGACGATTCATGTGCCTGGAGTTCAGTCATCTGACG AACGAAACGATGCAATGGCTATATGACCAGTACTCCTTCCAGGTGATTCC GCCGATGGGCCAATTGCTGGCTGGTCAGTGGCAGGCGTACCAGTATCTCG TTGAGAGCATCCGACGGTTTCCCAAGCAGGAGCAATTCAAGCAAATGATC GAGCAGGCCGGATTCGATCAGGTGTCCTACGAGAACCTAACCTTCGGCGT GGTCAGCATTCACTCCGGCTTCAAACTGTGACAGCCGAGGATGATATTTG TTGTAAGCGATTAGGAAATCCTAAGACCATTTGATGGGGCTTAACTATAA TCTATATTGTTGGTTTTTTGCGTTTTTTCATGCTGCTCACGTCGGGCAGG TCATAAAGCATCGAATTAAACAAGCTCCTCTGGCGGCTTTTATTTCTGTA TGTTTACATTTTGAGGTTTATGTAGCTCTTTGTCAAATATATGTACTTCA TGTGCCAAAAGGCAAACCCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2453-RA | 1350 | CG2453-RA | 134..1305 | 1..1172 | 5845 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 13083963..13084507 | 1169..625 | 2725 | 100 | Minus |
chrX | 22417052 | chrX | 13084555..13084976 | 630..209 | 2110 | 100 | Minus |
chrX | 22417052 | chrX | 13085034..13085242 | 209..1 | 1045 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 13193091..13193638 | 1172..625 | 2725 | 99.8 | Minus |
X | 23542271 | X | 13193686..13194107 | 630..209 | 2110 | 100 | Minus |
X | 23542271 | X | 13194165..13194373 | 209..1 | 1045 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 13201189..13201736 | 1172..625 | 2725 | 99.8 | Minus |
X | 23527363 | X | 13201784..13202205 | 630..209 | 2110 | 100 | Minus |
X | 23527363 | X | 13202263..13202471 | 209..1 | 1045 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 13083963..13084503 | 629..1169 | 100 | <- | Minus |
chrX | 13084557..13084975 | 210..628 | 100 | <- | Minus |
chrX | 13085034..13085242 | 1..209 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2453-RA | 1..906 | 26..931 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2453-RA | 1..906 | 26..931 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2453-RA | 1..906 | 26..931 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2453-RA | 1..906 | 26..931 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2453-RA | 1..906 | 26..931 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2453-RA | 1..1169 | 1..1169 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2453-RA | 1..1169 | 1..1169 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2453-RA | 1..1169 | 1..1169 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2453-RA | 1..1169 | 1..1169 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2453-RA | 20..1188 | 1..1169 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13193094..13193634 | 629..1169 | 99 | <- | Minus |
X | 13193688..13194106 | 210..628 | 100 | <- | Minus |
X | 13194165..13194373 | 1..209 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13193094..13193634 | 629..1169 | 99 | <- | Minus |
X | 13193688..13194106 | 210..628 | 100 | <- | Minus |
X | 13194165..13194373 | 1..209 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13193094..13193634 | 629..1169 | 99 | <- | Minus |
X | 13193688..13194106 | 210..628 | 100 | <- | Minus |
X | 13194165..13194373 | 1..209 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 13088198..13088406 | 1..209 | 100 | Minus | |
arm_X | 13087127..13087667 | 629..1169 | 99 | <- | Minus |
arm_X | 13087721..13088139 | 210..628 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13201192..13201732 | 629..1169 | 99 | <- | Minus |
X | 13201786..13202204 | 210..628 | 100 | <- | Minus |
X | 13202263..13202471 | 1..209 | 100 | Minus |
Translation from 0 to 930
> GM25741.hyp GKHLRINKMQTTRSTRLLSLARRFVHTRTASQSAQNSKGMASGAESISGK EKTTHFGFQTVRESEKEQKVHEVFEQVANSYDVMNDAMSLGIHRVWKDVF VERLGPTHGMRLLDMAGGTGDITFRYLRYLNNQPNPQQRPSHVTVSDINQ HMLNVGEERAKRLGLTTDQLSNCTVAWQCADAEKLPFPDASFTAYTIAFG IRNCTHVDKVLSEAYRVLQPGGRFMCLEFSHLTNETMQWLYDQYSFQVIP PMGQLLAGQWQAYQYLVESIRRFPKQEQFKQMIEQAGFDQVSYENLTFGV VSIHSGFKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2453-PC | 301 | CG2453-PC | 1..301 | 9..309 | 1580 | 100 | Plus |
CG2453-PB | 301 | CG2453-PB | 1..301 | 9..309 | 1580 | 100 | Plus |
CG2453-PA | 301 | CG2453-PA | 1..301 | 9..309 | 1580 | 100 | Plus |
Translation from 25 to 930
> GM25741.pep MQTTRSTRLLSLARRFVHTRTASQSAQNSKGMASGAESISGKEKTTHFGF QTVRESEKEQKVHEVFEQVANSYDVMNDAMSLGIHRVWKDVFVERLGPTH GMRLLDMAGGTGDITFRYLRYLNNQPNPQQRPSHVTVSDINQHMLNVGEE RAKRLGLTTDQLSNCTVAWQCADAEKLPFPDASFTAYTIAFGIRNCTHVD KVLSEAYRVLQPGGRFMCLEFSHLTNETMQWLYDQYSFQVIPPMGQLLAG QWQAYQYLVESIRRFPKQEQFKQMIEQAGFDQVSYENLTFGVVSIHSGFK L*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20959-PA | 302 | GF20959-PA | 1..302 | 1..301 | 1315 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19515-PA | 305 | GG19515-PA | 1..305 | 1..301 | 1533 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24114-PA | 282 | GH24114-PA | 1..282 | 1..301 | 1265 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2453-PC | 301 | CG2453-PC | 1..301 | 1..301 | 1580 | 100 | Plus |
CG2453-PB | 301 | CG2453-PB | 1..301 | 1..301 | 1580 | 100 | Plus |
CG2453-PA | 301 | CG2453-PA | 1..301 | 1..301 | 1580 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16372-PA | 296 | GI16372-PA | 1..296 | 1..301 | 1270 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15869-PA | 305 | GL15869-PA | 1..305 | 1..301 | 1369 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15370-PA | 305 | GA15370-PA | 1..305 | 1..301 | 1354 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11506-PA | 301 | GM11506-PA | 1..301 | 1..301 | 1607 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15899-PA | 85 | GD15899-PA | 1..85 | 217..301 | 460 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16746-PA | 291 | GJ16746-PA | 31..291 | 41..301 | 1248 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16503-PA | 306 | GK16503-PA | 24..306 | 20..301 | 1270 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16170-PA | 305 | GE16170-PA | 1..305 | 1..301 | 1528 | 91.8 | Plus |