BDGP Sequence Production Resources |
Search the DGRC for GM27569
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 275 |
Well: | 69 |
Vector: | pOT2 |
Associated Gene/Transcript | trsn-RA |
Protein status: | GM27569.pep: gold |
Preliminary Size: | 708 |
Sequenced Size: | 886 |
Gene | Date | Evidence |
---|---|---|
CG11761 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11761 | 2002-05-18 | Blastp of sequenced clone |
CG11761 | 2003-01-01 | Sim4 clustering to Release 3 |
trsn | 2008-04-29 | Release 5.5 accounting |
trsn | 2008-08-15 | Release 5.9 accounting |
trsn | 2008-12-18 | 5.12 accounting |
886 bp (886 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118870
> GM27569.complete CGGCACGAGCTTGGCTATACTCCCATCCCTATCGCCGGTATAAACAACTA AGAAAAGCAGCAAAACATTAAGCAAAAATGTCGAACTTCGTGAACTTGGA CATCTTCTCCAACTACCAAAAGTACATAGACAATGAACAGGAAGTCAGGG AGAACATTCGCATTGTGGTGCGCGAAATCGAGCATTTGTCAAAGGAAGCG CAGATTAAACTGCAGATTATTCATAGCGATTTGAGCCAGATTAGTGCCGC CTGCGGCTTAGCCCGCAAACAGGTTGAGCTGTGTGCCCAAAAGTACCAGA AATTGGCCGAACTGGTGCCAGCTGGGCAGTACTACAGATACTCCGATCAC TGGACCTTCATTACGCAGCGTTTGATCTTCATCATTGCCTTGGTTATTTA CCTGGAGGCGGGCTTCTTGGTCACCCGCGAAACAGTGGCCGAAATGCTGG GATTGAAGATCAGCCAGTCTGAGGGCTTCCATCTGGATGTGGAGGACTAT CTACTGGGCATACTGCAGTTGGCGTCGGAGCTCTCCCGATTCGCTACCAA TTCCGTCACCATGGGCGACTACGAGCGTCCCCTGAATATCTCCCATTTTA TTGGTGACCTGAACACGGGCTTCCGTCTGCTGAACCTGAAGAACGATGGC TTGCGAAAGCGCTTCGATGCCTTAAAGTATGATGTCAAGAAGATCGAGGA GGTCGTCTACGATGTCAGCATACGCGGTCTGTCCAGCAAGGAAAAGGACC AGCAGGAGGAGCCGGCTGTTCCTGCAACCGAATAGTTTACTTCGTACGTA GGATAAGGCGTTTATTAAAATGAAAAAGTTTCATTTAAACAAGCAAATAT ATTACATTCATTAAACAGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
trsn-RA | 889 | trsn-RA | 22..882 | 9..869 | 4275 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 6366566..6366980 | 868..454 | 2075 | 100 | Minus |
chr2R | 21145070 | chr2R | 6367519..6367662 | 152..9 | 705 | 99.3 | Minus |
chr2R | 21145070 | chr2R | 6367037..6367155 | 453..335 | 580 | 99.2 | Minus |
chr2R | 21145070 | chr2R | 6367215..6367311 | 337..241 | 485 | 100 | Minus |
chr2R | 21145070 | chr2R | 6367378..6367467 | 240..151 | 435 | 98.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 10479010..10479425 | 869..454 | 2080 | 100 | Minus |
2R | 25286936 | 2R | 10479964..10480107 | 152..9 | 705 | 99.3 | Minus |
2R | 25286936 | 2R | 10479482..10479600 | 453..335 | 595 | 100 | Minus |
2R | 25286936 | 2R | 10479660..10479756 | 337..241 | 485 | 100 | Minus |
2R | 25286936 | 2R | 10479823..10479912 | 240..151 | 435 | 98.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 10480209..10480624 | 869..454 | 2080 | 100 | Minus |
2R | 25260384 | 2R | 10481163..10481306 | 152..9 | 705 | 99.3 | Minus |
2R | 25260384 | 2R | 10480681..10480799 | 453..335 | 595 | 100 | Minus |
2R | 25260384 | 2R | 10480859..10480955 | 337..241 | 485 | 100 | Minus |
2R | 25260384 | 2R | 10481022..10481111 | 240..151 | 435 | 98.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 6367519..6367662 | 9..152 | 99 | Minus | |
chr2R | 6366566..6366980 | 454..868 | 100 | <- | Minus |
chr2R | 6367037..6367152 | 338..453 | 99 | <- | Minus |
chr2R | 6367215..6367311 | 241..337 | 100 | <- | Minus |
chr2R | 6367378..6367465 | 153..240 | 98 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
trsn-RA | 1..708 | 78..785 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
trsn-RA | 1..708 | 78..785 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
trsn-RA | 1..708 | 78..785 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
trsn-RA | 1..708 | 78..785 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
trsn-RA | 1..708 | 78..785 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
trsn-RA | 1..860 | 9..868 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
trsn-RA | 22..881 | 9..868 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
trsn-RA | 2..864 | 8..868 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
trsn-RA | 1..860 | 9..868 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
trsn-RA | 2..864 | 8..868 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10479660..10479756 | 241..337 | 100 | <- | Minus |
2R | 10479823..10479910 | 153..240 | 98 | <- | Minus |
2R | 10479964..10480107 | 9..152 | 99 | Minus | |
2R | 10479011..10479425 | 454..868 | 100 | <- | Minus |
2R | 10479482..10479597 | 338..453 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10479660..10479756 | 241..337 | 100 | <- | Minus |
2R | 10479823..10479910 | 153..240 | 98 | <- | Minus |
2R | 10479964..10480107 | 9..152 | 99 | Minus | |
2R | 10479011..10479425 | 454..868 | 100 | <- | Minus |
2R | 10479482..10479597 | 338..453 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10479660..10479756 | 241..337 | 100 | <- | Minus |
2R | 10479823..10479910 | 153..240 | 98 | <- | Minus |
2R | 10479964..10480107 | 9..152 | 99 | Minus | |
2R | 10479011..10479425 | 454..868 | 100 | <- | Minus |
2R | 10479482..10479597 | 338..453 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 6366516..6366930 | 454..868 | 100 | <- | Minus |
arm_2R | 6366987..6367102 | 338..453 | 100 | <- | Minus |
arm_2R | 6367165..6367261 | 241..337 | 100 | <- | Minus |
arm_2R | 6367328..6367415 | 153..240 | 98 | <- | Minus |
arm_2R | 6367469..6367612 | 9..152 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10480210..10480624 | 454..868 | 100 | <- | Minus |
2R | 10480681..10480796 | 338..453 | 100 | <- | Minus |
2R | 10480859..10480955 | 241..337 | 100 | <- | Minus |
2R | 10481022..10481109 | 153..240 | 98 | <- | Minus |
2R | 10481163..10481306 | 9..152 | 99 | Minus |
Translation from 77 to 784
> GM27569.pep MSNFVNLDIFSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHS DLSQISAACGLARKQVELCAQKYQKLAELVPAGQYYRYSDHWTFITQRLI FIIALVIYLEAGFLVTRETVAEMLGLKISQSEGFHLDVEDYLLGILQLAS ELSRFATNSVTMGDYERPLNISHFIGDLNTGFRLLNLKNDGLRKRFDALK YDVKKIEEVVYDVSIRGLSSKEKDQQEEPAVPATE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11105-PA | 235 | GF11105-PA | 1..235 | 1..235 | 1154 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22742-PA | 235 | GG22742-PA | 1..235 | 1..235 | 1172 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20630-PA | 234 | GH20630-PA | 1..232 | 1..232 | 1065 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
trsn-PA | 235 | CG11761-PA | 1..235 | 1..235 | 1183 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20191-PA | 234 | GI20191-PA | 1..234 | 1..235 | 1047 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17199-PA | 233 | GL17199-PA | 1..231 | 1..232 | 1083 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11181-PA | 233 | GA11181-PA | 1..231 | 1..232 | 1083 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20518-PA | 232 | GM20518-PA | 1..232 | 1..235 | 1093 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25978-PA | 230 | GD25978-PA | 1..230 | 1..235 | 1175 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20139-PA | 234 | GJ20139-PA | 1..232 | 1..232 | 1053 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10677-PA | 236 | GK10677-PA | 5..234 | 2..229 | 1040 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13101-PA | 235 | GE13101-PA | 1..235 | 1..235 | 1188 | 94.9 | Plus |
Translation from 77 to 784
> GM27569.hyp MSNFVNLDIFSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHS DLSQISAACGLARKQVELCAQKYQKLAELVPAGQYYRYSDHWTFITQRLI FIIALVIYLEAGFLVTRETVAEMLGLKISQSEGFHLDVEDYLLGILQLAS ELSRFATNSVTMGDYERPLNISHFIGDLNTGFRLLNLKNDGLRKRFDALK YDVKKIEEVVYDVSIRGLSSKEKDQQEEPAVPATE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
trsn-PA | 235 | CG11761-PA | 1..235 | 1..235 | 1183 | 100 | Plus |