BDGP Sequence Production Resources |
Search the DGRC for GM29503
Library: | GM |
Tissue Source: | Drosophila melanogaster ovary |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 295 |
Well: | 3 |
Vector: | pOT2 |
Associated Gene/Transcript | CG10623-RA |
Protein status: | GM29503.pep: gold |
Preliminary Size: | 1114 |
Sequenced Size: | 1483 |
Gene | Date | Evidence |
---|---|---|
CG10623 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10623 | 2002-05-18 | Blastp of sequenced clone |
CG10623 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10623 | 2008-04-29 | Release 5.5 accounting |
CG10623 | 2008-08-15 | Release 5.9 accounting |
CG10623 | 2008-12-18 | 5.12 accounting |
1483 bp (1483 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118872
> GM29503.complete AAGACATGGAAGTGAATCAAAAATGGAACTGGGACACCAAGCCAATTCTG GTCAAATGCGGAGGATTCTCCTCGCAATTGGCCAAGAATGTCACCGAAAA AGTGGACGGTGATCCACTGTGGGGATCGCGATTCGATGCCACCAATCCGG AAGCTGTGATCCAAACACATCTGGACTTTCTCCGCAACGGAGCGGATATT ATTCTAACCAACACGTATCAGTCCAGCGTCGAGGGATTCGTGAAGTACCT GGGCGTGACCAGAGAACGAGGTGTGGAGTTGATCCAAAAGAGCGTTCAAC TGGCCAAGCAGGCAAAGGAACAGTACCTTAGCGAAATCGGTTCTGAAGCG GAGTCGGCTCTTCCACTGATCATGGGCTCAATAGGTCCATATGGCGCCTA TCTCCACGATGGATCTGAGTACACCGGCAACTATGCGGACAAGATGTCCA AGGAGGAGCTGAGGGCGTGGCACAAGACAAGAATTGAGATTTGTCTCGCA GCTGGAGTGGATGGATTGGCCCTGGAAACACTTCCATGTCTGATGGAGGC AGAGGCAGTCACCGAATTAGTACTGGACAACTTTCCGGATGCCAAATTCT GGGTCTCCCTGCAGTGCATGGATGAAAAGCACATGGCTAGTGGAGAAAAC TTCGCGGAGGCGGCTCTCTCCCTCTGGCGGTTGGTCCAAAGTCGGAAGGC TGAAAACCGGCTCCTTGGGATCGGTCTGAACTGTGTAAACCCACTATTCG TGACCCCTTTGCTATCATCGCTTACCAAAGTGGCCGGTTCGGATCGCATC CCACTGGTGGTCTACAGCAATCGCGGCGAGATCTACGACGTCGAGCAGGG AGATTGGACTGGAACCGGCGAGGAGGTGGTCAAGTTTGTGCCCGAGTGGA TCCAGCTGGGAGTGCGCATCGTTGGCGGCTGTTGCCGGGTCTATCCGACG GACGTGTTGGCGATCCGCAAGTACGTCGATGGCCTCAACATAAAGCCGTA ATCGGGAGAGAACTCCGGTCACTGATAGCAGCCTTGTCGCTAATGCGAAA GCTGTTTCGTGTGACTAGACCTAGACCTATTTAGTTTGCTAAATACATAT ACGCGAGTACTAGATGTACCCAGATCAGATGGCTTCCTAATCAGCAGAGT GTGGAAAAAAGCGTGGACGGCTGGCTGGGAGACAAACACAGATTAGGCGG GCGGACCAAAGGTAAACAAGTGGGCTGGGGATATGGGCAGACGTTCGCCC AACGACTGTTTTTGCCAACCTAGCTCAATTTTTGAGTCCAAATCAAAACA ATTTTTCTATTCAATTATAACACAAAAACGTGCATTTGTCCTTTGAAAAA CTTGCTGTGTTCTTAGCTTTCTATTCTTTATAGCCGGATTTAATTTCTTT AAAATTAATATTGTTAAAAGTGTGTATGTATGTACTGATGTAAAGCAATA AACTACAAAAATATCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Tv1 | 6868 | Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). | 5127..5253 | 1453..1325 | 126 | 58.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 18954160..18955003 | 621..1465 | 99 | <- | Minus |
chr2L | 18955110..18955729 | 1..620 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10623-RA | 1..996 | 6..1001 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10623-RA | 1..996 | 6..1001 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10623-RA | 1..996 | 6..1001 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10623-RA | 1..996 | 6..1001 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10623-RA | 1..996 | 6..1001 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10623-RA | 120..1583 | 1..1465 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10623-RA | 120..1583 | 1..1465 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10623-RA | 120..1583 | 1..1465 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10623-RA | 114..1577 | 1..1465 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10623-RA | 120..1583 | 1..1465 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18955481..18956324 | 621..1465 | 99 | <- | Minus |
2L | 18956431..18957050 | 1..620 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18955481..18956324 | 621..1465 | 99 | <- | Minus |
2L | 18956431..18957050 | 1..620 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18955481..18956324 | 621..1465 | 99 | <- | Minus |
2L | 18956431..18957050 | 1..620 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 18955481..18956324 | 621..1465 | 99 | <- | Minus |
arm_2L | 18956431..18957050 | 1..620 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18955481..18956324 | 621..1465 | 99 | <- | Minus |
2L | 18956431..18957050 | 1..620 | 99 | Minus |
Translation from 2 to 1000
> GM29503.hyp DMEVNQKWNWDTKPILVKCGGFSSQLAKNVTEKVDGDPLWGSRFDATNPE AVIQTHLDFLRNGADIILTNTYQSSVEGFVKYLGVTRERGVELIQKSVQL AKQAKEQYLSEIGSEAESALPLIMGSIGPYGAYLHDGSEYTGNYADKMSK EELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDNFPDAKFW VSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFV TPLLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEEVVKFVPEWI QLGVRIVGGCCRVYPTDVLAIRKYVDGLNIKP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10623-PC | 331 | CG10623-PC | 1..331 | 2..332 | 1733 | 100 | Plus |
CG10623-PB | 331 | CG10623-PB | 1..331 | 2..332 | 1733 | 100 | Plus |
CG10623-PA | 331 | CG10623-PA | 1..331 | 2..332 | 1733 | 100 | Plus |
CG10621-PC | 331 | CG10621-PC | 6..325 | 15..329 | 915 | 53.7 | Plus |
CG10621-PB | 331 | CG10621-PB | 6..325 | 15..329 | 915 | 53.7 | Plus |
Translation from 5 to 1000
> GM29503.pep MEVNQKWNWDTKPILVKCGGFSSQLAKNVTEKVDGDPLWGSRFDATNPEA VIQTHLDFLRNGADIILTNTYQSSVEGFVKYLGVTRERGVELIQKSVQLA KQAKEQYLSEIGSEAESALPLIMGSIGPYGAYLHDGSEYTGNYADKMSKE ELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDNFPDAKFWV SLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVT PLLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEEVVKFVPEWIQ LGVRIVGGCCRVYPTDVLAIRKYVDGLNIKP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14646-PA | 329 | GF14646-PA | 1..327 | 1..329 | 1347 | 75.8 | Plus |
Dana\GF14647-PA | 331 | GF14647-PA | 6..325 | 14..328 | 953 | 55.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21670-PA | 331 | GG21670-PA | 1..331 | 1..331 | 1634 | 90.9 | Plus |
Dere\GG21671-PA | 331 | GG21671-PA | 6..325 | 14..328 | 925 | 53.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11601-PA | 349 | GH11601-PA | 8..333 | 6..325 | 1165 | 64.7 | Plus |
Dgri\GH11602-PA | 328 | GH11602-PA | 6..325 | 14..328 | 945 | 54.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10623-PC | 331 | CG10623-PC | 1..331 | 1..331 | 1733 | 100 | Plus |
CG10623-PB | 331 | CG10623-PB | 1..331 | 1..331 | 1733 | 100 | Plus |
CG10623-PA | 331 | CG10623-PA | 1..331 | 1..331 | 1733 | 100 | Plus |
CG10621-PC | 331 | CG10621-PC | 6..325 | 14..328 | 915 | 53.7 | Plus |
CG10621-PB | 331 | CG10621-PB | 6..325 | 14..328 | 915 | 53.7 | Plus |
CG10621-PA | 331 | CG10621-PA | 6..325 | 14..328 | 915 | 53.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17170-PA | 349 | GI17170-PA | 8..339 | 8..331 | 1122 | 63 | Plus |
Dmoj\GI17171-PA | 331 | GI17171-PA | 6..325 | 14..328 | 934 | 54.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19625-PA | 349 | GL19625-PA | 6..337 | 2..329 | 1271 | 70.8 | Plus |
Dper\GL19626-PA | 331 | GL19626-PA | 6..325 | 14..328 | 918 | 53.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10445-PA | 349 | GA10445-PA | 6..337 | 2..329 | 1271 | 70.8 | Plus |
Dpse\GA10443-PA | 331 | GA10443-PA | 6..325 | 14..328 | 918 | 53.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17049-PA | 331 | GM17049-PA | 1..331 | 1..331 | 1734 | 97.9 | Plus |
Dsec\GM17050-PA | 331 | GM17050-PA | 6..325 | 14..328 | 939 | 54.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21796-PA | 331 | GD21796-PA | 1..331 | 1..331 | 1724 | 96.7 | Plus |
Dsim\GD21797-PA | 331 | GD21797-PA | 6..325 | 14..328 | 933 | 54.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17676-PA | 350 | GJ17676-PA | 8..339 | 8..331 | 1162 | 64.5 | Plus |
Dvir\GJ17677-PA | 331 | GJ17677-PA | 6..325 | 14..328 | 935 | 54.7 | Plus |