BDGP Sequence Production Resources |
Search the DGRC for HL01053
Library: | HL |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 10 |
Well: | 53 |
Vector: | pBS SK- |
Associated Gene/Transcript | fon-RB |
Protein status: | HL01053.pep: gold |
Preliminary Size: | 1962 |
Sequenced Size: | 1913 |
Gene | Date | Evidence |
---|---|---|
CG15825 | 2001-01-01 | Release 2 assignment |
CG15825 | 2002-05-17 | Blastp of sequenced clone |
CG15825 | 2003-01-01 | Sim4 clustering to Release 3 |
fon | 2008-04-29 | Release 5.5 accounting |
fon | 2008-08-15 | Release 5.9 accounting |
fon | 2008-12-18 | 5.12 accounting |
1913 bp (1913 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118481
> HL01053.complete AACGTATTTTTCGGTCAAGAGCTAAAACGAATTGCCAAAATGAATAAGCT GCTGATTTTGGCCCTTTGCCTGGGTGTGGTCTGTGGAGATTTCCAACAAA GTTTGGGGAGAACCAAACGTGACAGTTTCCACTCTCGCCACTACAGTACC CACGGACAAGCGGTGGAGCAGGCTCGCAAGAACGCCGGCTACGGTGGAGG TTATAGCGGTAGCTTTGGAGCTGGCGTCGATGGCGCCTCCGCTCAGGTTG ATGACTCTGCTCTGGGAAAACTCGAGAGCTCCTACGACTCCGTGGGTGCG ACTGAATCCGCCGAAGGTGCCTCCGCTGGCGGATTAGGTGGTGCCGTTGA GACTTTGGGTGGTTCTGCTGGTACGAACACCATTGGTGCTGGTGTTGGAA GTTCCTTCGGCTCTAACTTTGCCTCCGGTTTTGGCGGCCAGAATGCTGCC TCCTTTGGCGCTCAGAATGCTGCTGGCTTTGGCGCCCAGAATGCCGCCTC CTTTGGCGCCCAGAATGCTGCCTCCTTCGGTAGCTCCTTCTCCAGCAACG CCGCCTTTCAGACCAGCTCCGCCTCCAACTTCGGCAGCACCGCCGCTCAC CAGGTGGGCAGCAATGTGGAGTTTGCTGATAACGCCAATGCCGGCAACAA GGTTGACTTTGGTGGCGTAAACGCCGTGGACTCCAGTGCTCAGCTGCTCA GCGGAGTTCAAACCGTGCAGTCCGTCCCCACTTCCGAGTATTACAGGCAC GAGAAGATTGTGTCCACCCCGCAACAGGTGGTCTACACCATTCCCGGTGG CTCCCAGCGTTACGTTCATCACGAGGAACGTATCGTTGAACAGCCTACCC AGGTGACCCAGACGGTCCCAGTTCAAACCGCACACTACTATCAACGAAAG GTGACCACCACTGCGTCCGCACCACAGCTGGTTCAGCCAGTTGCCAGCAG CCGTTTGACTTACGGATCGAATGCCGCCTCCACCTTTGGCAGCAATGCTG CCTCCAACTTCGGCAGCAATGCCGCCACCAACTTCGGCAGCAATGCCGCC ACCAACTTCGGCAGCAATGCCGCCTTTAACTCTCAGTTTGGCAGTTCTTA TGGCCAGAACTTCCAGCAGAACAGCCAGCTGAGCCAGCTGCTCAGCCAAA CCCAGCAAGCTGCCCGTCAGCAGGCTGCCTTACAAGCCGCATCCGCCAAC CAGGTGCAAGCTGGAAGTGGCTACGCCGCCGGCTCACAAGGTGGCTTTAA CTCTGGCTACAACTCCGCCTTCAACTCTGGCTCCCAGTTTGGATTCAACT CCGCTAGCTCTTTGAACTCTGCCAGCTCCCTGAACTCCGCCAGTACCGGT AACAGCGCAGCTCTACTGAGTGGATCTCTGTTGGGCGGCAGCCAAGGATC TCTGCTGAGCGGACAGGTTGGCGGACAGCAGTCGCTGCTCAGTGGATCCC TATTAAGCGGACAGCAGAACTTGGGACTTGGACTGAACGCGGCACAGACC GGTCAAGTGGTTGGAGCTAGCAGCGTTGGGGCCGGATTATCAGCAGGAGC CGGAAACTTGGGCAGTGGCTACCGTACCAAGCAGTGGGAGAAGCAGTCCA AGTGGTCTTCCCAGAACTCGTACGATTCCAATGGCCATGTCAACAACTAC AAGGATCTAGTCACCGGCGAGAGCGAAAGTGTTGATATCAATGGCAAGCG GGCGGGATACCATGCGGTGACAGCCTCCGTCGATGACAACGGCAAGATTG GCACCCACAGTGTTCACTCGTAAAGCGTCTACATCAATCAGTACCCATAA CTTTTTACGCCTGTCCTGTTCTTAGAGAGTGAAATACTCAGCTCGCACTG TTGTTGGAAAATAATGTGAACGTAAAATAAATTTTTTAAATGTCAAAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fon-RC | 2296 | fon-RC | 162..2058 | 1..1897 | 9485 | 100 | Plus |
fon-RB | 2296 | fon-RB | 162..2058 | 1..1897 | 9485 | 100 | Plus |
fon-RA | 2260 | fon-RA | 262..2022 | 137..1897 | 8805 | 100 | Plus |
fon-RA | 2260 | fon-RA | 162..262 | 1..101 | 505 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 19382416..19383899 | 1620..137 | 7375 | 99.8 | Minus |
chr2L | 23010047 | chr2L | 19382024..19382298 | 1894..1620 | 1360 | 99.6 | Minus |
chr2L | 23010047 | chr2L | 19384622..19384709 | 88..1 | 425 | 98.9 | Minus |
chr2L | 23010047 | chr2L | 19382962..19383042 | 1050..970 | 330 | 93.8 | Minus |
chr2L | 23010047 | chr2L | 19382986..19383066 | 1074..994 | 330 | 93.8 | Minus |
chr2L | 23010047 | chr2L | 19382962..19383018 | 1026..970 | 210 | 91.2 | Minus |
chr2L | 23010047 | chr2L | 19383010..19383066 | 1074..1018 | 210 | 91.2 | Minus |
chr2L | 23010047 | chr2L | 19383509..19383582 | 503..430 | 205 | 85.1 | Minus |
chr2L | 23010047 | chr2L | 19383533..19383606 | 527..454 | 205 | 85.1 | Minus |
chr2L | 23010047 | chr2L | 19384205..19384244 | 137..98 | 200 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 19383881..19385364 | 1620..137 | 7420 | 100 | Minus |
2L | 23513712 | 2L | 19383486..19383763 | 1897..1620 | 1390 | 100 | Minus |
2L | 23513712 | 2L | 19386087..19386174 | 88..1 | 440 | 100 | Minus |
2L | 23513712 | 2L | 19384427..19384507 | 1050..970 | 330 | 93.8 | Minus |
2L | 23513712 | 2L | 19384451..19384531 | 1074..994 | 330 | 93.8 | Minus |
2L | 23513712 | 2L | 19384427..19384483 | 1026..970 | 210 | 91.2 | Minus |
2L | 23513712 | 2L | 19384475..19384531 | 1074..1018 | 210 | 91.2 | Minus |
2L | 23513712 | 2L | 19384974..19385047 | 503..430 | 205 | 85.1 | Minus |
2L | 23513712 | 2L | 19384998..19385071 | 527..454 | 205 | 85.1 | Minus |
2L | 23513712 | 2L | 19385670..19385709 | 137..98 | 200 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 19383881..19385364 | 1620..137 | 7420 | 100 | Minus |
2L | 23513712 | 2L | 19383486..19383763 | 1897..1620 | 1390 | 100 | Minus |
2L | 23513712 | 2L | 19386087..19386174 | 88..1 | 440 | 100 | Minus |
2L | 23513712 | 2L | 19385670..19385709 | 137..98 | 200 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2461..2648 | 876..1067 | 118 | 56.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 19384622..19384709 | 1..88 | 98 | Minus | |
chr2L | 19382024..19382297 | 1621..1894 | 99 | <- | Minus |
chr2L | 19382416..19383898 | 138..1620 | 99 | <- | Minus |
chr2L | 19384205..19384249 | 89..137 | 89 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fon-RB | 1..1734 | 40..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fon-RC | 1..1734 | 40..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fon-RB | 1..1734 | 40..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fon-RB | 1..1734 | 40..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fon-RB | 1..1734 | 40..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fon-RB | 29..1922 | 1..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fon-RB | 29..1922 | 1..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fon-RB | 32..1925 | 1..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fon-RB | 29..1922 | 1..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fon-RB | 32..1925 | 1..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19386087..19386174 | 1..88 | 100 | Minus | |
2L | 19383489..19383762 | 1621..1894 | 100 | <- | Minus |
2L | 19383881..19385363 | 138..1620 | 100 | <- | Minus |
2L | 19385670..19385714 | 89..137 | 89 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19386087..19386174 | 1..88 | 100 | Minus | |
2L | 19383489..19383762 | 1621..1894 | 100 | <- | Minus |
2L | 19383881..19385363 | 138..1620 | 100 | <- | Minus |
2L | 19385670..19385714 | 89..137 | 89 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19386087..19386174 | 1..88 | 100 | Minus | |
2L | 19383489..19383762 | 1621..1894 | 100 | <- | Minus |
2L | 19383881..19385363 | 138..1620 | 100 | <- | Minus |
2L | 19385670..19385714 | 89..137 | 89 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 19383489..19383762 | 1621..1894 | 100 | <- | Minus |
arm_2L | 19383881..19385363 | 138..1620 | 100 | <- | Minus |
arm_2L | 19385670..19385714 | 89..137 | 89 | <- | Minus |
arm_2L | 19386087..19386174 | 1..88 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19383489..19383762 | 1621..1894 | 100 | <- | Minus |
2L | 19383881..19385363 | 138..1620 | 100 | <- | Minus |
2L | 19385670..19385714 | 89..137 | 89 | <- | Minus |
2L | 19386087..19386174 | 1..88 | 100 | Minus |
Translation from 0 to 336
> HL01053.hyp NVFFGQELKRIAKMNKLLILALCLGVVCGDLKVWGEPNVTVSTLATTVPT DKRWSRLARTPATVEVIAVALELASMAPPLRLMTLLWENSRAPTTPWVRL NPPKVPPLAD*
Translation from 39 to 1772
> HL01053.pep MNKLLILALCLGVVCGDFQQSLGRTKRDSFHSRHYSTHGQAVEQARKNAG YGGGYSGSFGAGVDGASAQVDDSALGKLESSYDSVGATESAEGASAGGLG GAVETLGGSAGTNTIGAGVGSSFGSNFASGFGGQNAASFGAQNAAGFGAQ NAASFGAQNAASFGSSFSSNAAFQTSSASNFGSTAAHQVGSNVEFADNAN AGNKVDFGGVNAVDSSAQLLSGVQTVQSVPTSEYYRHEKIVSTPQQVVYT IPGGSQRYVHHEERIVEQPTQVTQTVPVQTAHYYQRKVTTTASAPQLVQP VASSRLTYGSNAASTFGSNAASNFGSNAATNFGSNAATNFGSNAAFNSQF GSSYGQNFQQNSQLSQLLSQTQQAARQQAALQAASANQVQAGSGYAAGSQ GGFNSGYNSAFNSGSQFGFNSASSLNSASSLNSASTGNSAALLSGSLLGG SQGSLLSGQVGGQQSLLSGSLLSGQQNLGLGLNAAQTGQVVGASSVGAGL SAGAGNLGSGYRTKQWEKQSKWSSQNSYDSNGHVNNYKDLVTGESESVDI NGKRAGYHAVTASVDDNGKIGTHSVHS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15199-PA | 562 | GF15199-PA | 1..420 | 1..407 | 795 | 52.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21638-PA | 559 | GG21638-PA | 1..559 | 1..577 | 1851 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13472-PA | 579 | GH13472-PA | 12..579 | 12..577 | 876 | 47.3 | Plus |
Dgri\GH17550-PA | 570 | GH17550-PA | 12..570 | 12..577 | 815 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fon-PC | 577 | CG15825-PC | 1..577 | 1..577 | 2908 | 100 | Plus |
fon-PB | 577 | CG15825-PB | 1..577 | 1..577 | 2908 | 100 | Plus |
fon-PD | 574 | CG15825-PD | 1..574 | 1..577 | 2875 | 99.5 | Plus |
fon-PA | 565 | CG15825-PA | 1..565 | 1..577 | 2822 | 97.9 | Plus |
Mur89F-PC | 2158 | CG4090-PC | 537..1028 | 43..528 | 211 | 21.7 | Plus |
Mur89F-PB | 2159 | CG4090-PB | 537..1028 | 43..528 | 211 | 21.7 | Plus |
Alh-PD | 1323 | CG1070-PD | 479..940 | 61..513 | 192 | 22.8 | Plus |
Alh-PA | 1376 | CG1070-PA | 532..993 | 61..513 | 192 | 22.8 | Plus |
Alh-PP | 1717 | CG1070-PP | 532..993 | 61..513 | 192 | 22.8 | Plus |
Alh-PL | 1332 | CG1070-PL | 479..949 | 61..513 | 188 | 22.7 | Plus |
Alh-PK | 1385 | CG1070-PK | 532..1002 | 61..513 | 188 | 22.7 | Plus |
Mur89F-PC | 2158 | CG4090-PC | 263..751 | 26..528 | 177 | 21.7 | Plus |
Mur89F-PB | 2159 | CG4090-PB | 263..751 | 26..528 | 177 | 21.7 | Plus |
Mur29B-PA | 555 | CG31901-PA | 51..471 | 56..495 | 174 | 19.4 | Plus |
lig-PL | 1261 | CG8715-PL | 653..961 | 148..510 | 166 | 25.3 | Plus |
lig-PK | 1417 | CG8715-PK | 653..961 | 148..510 | 166 | 25.3 | Plus |
sbb-PE | 929 | CG5580-PE | 313..791 | 49..520 | 162 | 20.9 | Plus |
sbb-PC | 929 | CG5580-PC | 313..791 | 49..520 | 162 | 20.9 | Plus |
sbb-PF | 939 | CG5580-PF | 323..801 | 49..520 | 162 | 20.9 | Plus |
sbb-PH | 2302 | CG5580-PH | 313..791 | 49..520 | 162 | 20.9 | Plus |
sbb-PD | 2302 | CG5580-PD | 313..791 | 49..520 | 162 | 20.9 | Plus |
sbb-PG | 2312 | CG5580-PG | 323..801 | 49..520 | 162 | 20.9 | Plus |
sbb-PJ | 2330 | CG5580-PJ | 323..801 | 49..520 | 162 | 20.9 | Plus |
CG7300-PD | 886 | CG7300-PD | 19..556 | 48..574 | 161 | 23.5 | Plus |
CG7300-PB | 886 | CG7300-PB | 19..556 | 48..574 | 161 | 23.5 | Plus |
lig-PI | 1300 | CG8715-PI | 589..1053 | 43..531 | 161 | 23.9 | Plus |
lig-PG | 1332 | CG8715-PG | 729..1257 | 53..574 | 160 | 24.5 | Plus |
lig-PF | 1332 | CG8715-PF | 729..1257 | 53..574 | 160 | 24.5 | Plus |
lig-PE | 1332 | CG8715-PE | 729..1257 | 53..574 | 160 | 24.5 | Plus |
lig-PB | 1332 | CG8715-PB | 729..1257 | 53..574 | 160 | 24.5 | Plus |
lig-PA | 1343 | CG8715-PA | 729..1257 | 53..574 | 160 | 24.5 | Plus |
lig-PC | 1343 | CG8715-PC | 729..1257 | 53..574 | 160 | 24.5 | Plus |
lig-PD | 1375 | CG8715-PD | 729..1257 | 53..574 | 160 | 24.5 | Plus |
lig-PH | 1330 | CG8715-PH | 729..1249 | 53..565 | 159 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17224-PA | 542 | GI17224-PA | 139..542 | 174..577 | 665 | 48.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21112-PA | 566 | GL21112-PA | 1..412 | 1..419 | 975 | 55.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13975-PA | 566 | GA13975-PA | 1..412 | 1..419 | 975 | 55.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17016-PA | 571 | GM17016-PA | 1..571 | 1..577 | 2180 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21766-PA | 571 | GD21766-PA | 1..571 | 1..577 | 2083 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17981-PA | 542 | GJ17981-PA | 1..378 | 1..403 | 651 | 45.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23841-PA | 563 | GK23841-PA | 497..563 | 511..577 | 260 | 68.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12657-PA | 561 | GE12657-PA | 1..561 | 1..577 | 1981 | 85.9 | Plus |