BDGP Sequence Production Resources |
Search the DGRC for HL01076
Library: | HL |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 10 |
Well: | 76 |
Vector: | pBS SK- |
Associated Gene/Transcript | Ect3-RA |
Protein status: | HL01076.pep: gold |
Preliminary Size: | 2314 |
Sequenced Size: | 2258 |
Gene | Date | Evidence |
---|---|---|
CG3132 | 2001-01-01 | Release 2 assignment |
CG3132 | 2002-06-06 | Blastp of sequenced clone |
CG3132 | 2003-01-01 | Sim4 clustering to Release 3 |
Ect3 | 2008-04-29 | Release 5.5 accounting |
Ect3 | 2008-08-15 | Release 5.9 accounting |
Ect3 | 2008-12-18 | 5.12 accounting |
2258 bp (2258 high quality bases) assembled on 2002-06-06
GenBank Submission: AY119565
> HL01076.complete AACAGTTGGCGCACTTTCCACCTAGTAATTGCAACCATCGCGATCGTATT CTGTGTTTTTATATCGTCTGTGCTCTAAATCAACACTAAAAAGTCAAACA CTTCTTTCACTGCGTGTAGCTGCAATCGGCGAGAATGAAGTTCAGTGTGG TGGTCCTGGTGGCCCTACTACCGCTGCTAGGAGCTGTTTCAGCGAATCGC ACTTTTGTGGTGGACTACGAAAAGGATCAGTTCCTAAAGGATGGAGAACC ATTCCGATTCATTGCCGGCTCCTTCCACTACTTCCGTGCTCATCCAGCCA CCTGGCAAAGGCATCTTAGGACCATGAGAGCTGCGGGTCTGAATGCGGTG ACAACCTATGTGGAGTGGTCATTGCACAATCCGCGGGATGGCGTTTATGT GTGGAGCGGCATTGCCGATCTGGAACACTTTATACGCCTGGCCGTGGGCG AGGATCTGCTGGTCATCCTCCGTCCGGGTCCGTATATTTGTGCGGAGCGT GACATGGGCGGCTTTCCCTACTGGCTGCTGAATAAGTATCCGGGCATTCA GCTCCGGACAGCAGATGTCAATTATCTTAGCGAAATTCGCATTTGGTATA CCCAACTGTTTGCCAAAATGAATAAATATCTGTATGGCAATGGTGGGCCA ATTATAATGGTTCAGGTGGAGAACGAATATGGCTCCTTCTATGCCTGCGA TCTCAACTATCGGAATTGGCTACGCGATGAGACCGAGAGTCATGTCAAAG GTCAGGCGGTGCTCTTCACCAACGATGGACCCAGTGTGCTGCGCTGTGGA AAAATCCAGGGCGTCCTAGCGACCATGGACTTTGGAGCAACGAACGATCT CAAGCCCATTTGGGCCAAGTTTAGAAGGTACCAGCCAAAGGGTCCGCTGG TCAATGCGGAATACTATCCCGGTTGGCTAACTCACTGGACGGAGCCGATG GCCAATGTTAGCACCCAATCGATTACTTCCACTTTTATAAACATGCTGGA TCATGGTGCCAGTGTGAACTTCTACATGTTCTACGGCGGCACCAACTTCG GATTCACAGCTGGTGCCAATGACATTGGACCCGGAAACTACATGGCTGAC ATTACCAGCTACGACTACGATGCACCCATGACGGAGGCGGGGGATCCCAC TCCCAAATACCAGGCCCTGCGACGCATCATTGGCCGCTATCTCCCGCTGC CAAATCAACCCGTGCCCGGACCCGTACCCAAGCGATCCTACGGAACTGTG CGTCTGACCACCTGCTGTAGTCTGCTTTCGTCGGAGGCTCGATCTCGTCT CTCCACTGGATTTGTGCAGTCCGCCAAGCCGAAGAGCTTCGAGGCTTTGG GACAGTACTCTGGTTTGGTGCTCTACGAGACCTGGTTGCCCAGCTTCCAG CGGGATCCGAGCATCCTTAGCGTTCCCGGACTGGCGGATCGAGGTTACGT TTATGTGGATGGTGAGTTCGTGGGTATTCTGGCCAGGGAAACCCCCGTGT TCGAATTGCCACTCAGTGCAAGTGCCGGGCGGAGGTTCCAGATTATCGTA GAGAACCAGGGTCGCATCAACTACGGTCGACAGTTGAACGATTTTAAGGG CATCCTGCGGGATGTTCGACTGGACAAGCAGGTGCTGAGCAACTGGAACA TGACCCAATTCCCACTCGAATCGTACGACAACCTGGAGCAGCTGATTACC CAGTCGGATGAGGCAGTTCGTCAGGGCTTCCAGGAGCTAAAGAAGTTGCG CACAATGCTGCGCACTGGTCCCGCCATTTACCACGGTCAACTGGACATCC AAAAGGAATCTGATCTGGCGGACACCTATCTGGACATGTCCGGCTGGGGC AAGGGCATTGTCTTTGTGAATGGCGAAAATCTCGGCAGGTATTGGCCCCT GGTGGGACCTCAAGTCACCCTGTATGTTCCGGCCGCCGTGCTCAAGGCGG GCTCAAATCGACTGGTGGTGGTGGAGTATCAGCAGACACCCGCCTCACAG GAGCTGCACTTCCGAGATACCCCCATTCTGAACGCGAGGACCGTTTAGTC GTCGGCCTAAGGACCATTGCGACTTGCATCCATCGCTGTAGCCATAAATC ATGCATCATCATCCGTATATGTAGATCTAAATGTAAATTTATGCGGTTTA AGTTCTTTGCAAGACATTAAAGCAACTCCGAGACGGACGCGTCCTGTCTG CCTCGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 7827736..7828954 | 989..2207 | 6095 | 100 | Plus |
chr3R | 27901430 | chr3R | 7827214..7827631 | 571..988 | 2075 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 7826645..7826868 | 132..355 | 1105 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 7826920..7827139 | 351..570 | 1085 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 7824736..7824868 | 1..133 | 665 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 12002298..12003517 | 989..2208 | 6100 | 100 | Plus |
3R | 32079331 | 3R | 12001776..12002193 | 571..988 | 2090 | 100 | Plus |
3R | 32079331 | 3R | 12001207..12001430 | 132..355 | 1120 | 100 | Plus |
3R | 32079331 | 3R | 12001482..12001701 | 351..570 | 1085 | 99.5 | Plus |
3R | 32079331 | 3R | 11999307..11999439 | 1..133 | 665 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 11743129..11744348 | 989..2208 | 6100 | 100 | Plus |
3R | 31820162 | 3R | 11742607..11743024 | 571..988 | 2090 | 100 | Plus |
3R | 31820162 | 3R | 11742038..11742261 | 132..355 | 1120 | 100 | Plus |
3R | 31820162 | 3R | 11742313..11742532 | 351..570 | 1085 | 99.5 | Plus |
3R | 31820162 | 3R | 11740138..11740270 | 1..133 | 665 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 7824736..7824868 | 1..133 | 100 | -> | Plus |
chr3R | 7826647..7826868 | 134..355 | 99 | -> | Plus |
chr3R | 7826925..7827139 | 356..570 | 100 | -> | Plus |
chr3R | 7827214..7827631 | 571..988 | 99 | -> | Plus |
chr3R | 7827736..7828954 | 989..2207 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ect3-RA | 1..1914 | 135..2048 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ect3-RA | 1..1914 | 135..2048 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ect3-RA | 1..1914 | 135..2048 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ect3-RA | 1..1914 | 135..2048 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ect3-RA | 1..1914 | 135..2048 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ect3-RA | 1..2207 | 1..2207 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ect3-RA | 1..2207 | 1..2207 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ect3-RA | 30..2236 | 1..2207 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ect3-RA | 1..2207 | 1..2207 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ect3-RA | 30..2236 | 1..2207 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11999307..11999439 | 1..133 | 100 | -> | Plus |
3R | 12001209..12001430 | 134..355 | 100 | -> | Plus |
3R | 12001487..12001701 | 356..570 | 100 | -> | Plus |
3R | 12001776..12002193 | 571..988 | 100 | -> | Plus |
3R | 12002298..12003516 | 989..2207 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11999307..11999439 | 1..133 | 100 | -> | Plus |
3R | 12001209..12001430 | 134..355 | 100 | -> | Plus |
3R | 12001487..12001701 | 356..570 | 100 | -> | Plus |
3R | 12001776..12002193 | 571..988 | 100 | -> | Plus |
3R | 12002298..12003516 | 989..2207 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11999307..11999439 | 1..133 | 100 | -> | Plus |
3R | 12001209..12001430 | 134..355 | 100 | -> | Plus |
3R | 12001487..12001701 | 356..570 | 100 | -> | Plus |
3R | 12001776..12002193 | 571..988 | 100 | -> | Plus |
3R | 12002298..12003516 | 989..2207 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 7825029..7825161 | 1..133 | 100 | -> | Plus |
arm_3R | 7826931..7827152 | 134..355 | 100 | -> | Plus |
arm_3R | 7827209..7827423 | 356..570 | 100 | -> | Plus |
arm_3R | 7827498..7827915 | 571..988 | 100 | -> | Plus |
arm_3R | 7828020..7829238 | 989..2207 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11742040..11742261 | 134..355 | 100 | -> | Plus |
3R | 11742318..11742532 | 356..570 | 100 | -> | Plus |
3R | 11742607..11743024 | 571..988 | 100 | -> | Plus |
3R | 11743129..11744347 | 989..2207 | 100 | Plus | |
3R | 11740138..11740270 | 1..133 | 100 | -> | Plus |
Translation from 134 to 2047
> HL01076.pep MKFSVVVLVALLPLLGAVSANRTFVVDYEKDQFLKDGEPFRFIAGSFHYF RAHPATWQRHLRTMRAAGLNAVTTYVEWSLHNPRDGVYVWSGIADLEHFI RLAVGEDLLVILRPGPYICAERDMGGFPYWLLNKYPGIQLRTADVNYLSE IRIWYTQLFAKMNKYLYGNGGPIIMVQVENEYGSFYACDLNYRNWLRDET ESHVKGQAVLFTNDGPSVLRCGKIQGVLATMDFGATNDLKPIWAKFRRYQ PKGPLVNAEYYPGWLTHWTEPMANVSTQSITSTFINMLDHGASVNFYMFY GGTNFGFTAGANDIGPGNYMADITSYDYDAPMTEAGDPTPKYQALRRIIG RYLPLPNQPVPGPVPKRSYGTVRLTTCCSLLSSEARSRLSTGFVQSAKPK SFEALGQYSGLVLYETWLPSFQRDPSILSVPGLADRGYVYVDGEFVGILA RETPVFELPLSASAGRRFQIIVENQGRINYGRQLNDFKGILRDVRLDKQV LSNWNMTQFPLESYDNLEQLITQSDEAVRQGFQELKKLRTMLRTGPAIYH GQLDIQKESDLADTYLDMSGWGKGIVFVNGENLGRYWPLVGPQVTLYVPA AVLKAGSNRLVVVEYQQTPASQELHFRDTPILNARTV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17225-PA | 637 | GF17225-PA | 1..636 | 1..636 | 2936 | 84.1 | Plus |
Dana\GF14288-PA | 661 | GF14288-PA | 1..648 | 1..637 | 1620 | 49.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18564-PA | 637 | GG18564-PA | 1..637 | 1..637 | 3233 | 95.8 | Plus |
Dere\GG24263-PA | 672 | GG24263-PA | 46..642 | 24..618 | 1618 | 52.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23545-PA | 639 | GH23545-PA | 8..639 | 6..636 | 2700 | 79.1 | Plus |
Dgri\GH25263-PA | 619 | GH25263-PA | 8..619 | 6..636 | 2529 | 75.3 | Plus |
Dgri\GH10713-PA | 680 | GH10713-PA | 55..650 | 23..618 | 1609 | 51.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ect3-PA | 637 | CG3132-PA | 1..637 | 1..637 | 3388 | 100 | Plus |
Gal-PA | 672 | CG9092-PA | 23..641 | 1..617 | 1624 | 52 | Plus |
Gal-PB | 670 | CG9092-PB | 44..639 | 24..617 | 1622 | 53.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23552-PA | 641 | GI23552-PA | 1..638 | 1..635 | 2765 | 78.5 | Plus |
Dmoj\GI11295-PA | 678 | GI11295-PA | 51..649 | 23..618 | 1619 | 52.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22259-PA | 640 | GL22259-PA | 1..639 | 1..636 | 2842 | 80.3 | Plus |
Dper\GL19091-PA | 672 | GL19091-PA | 47..642 | 24..618 | 1639 | 53.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16177-PA | 640 | GA16177-PA | 1..639 | 1..636 | 2843 | 80.4 | Plus |
Dpse\GA25341-PA | 672 | GA25341-PA | 47..642 | 24..618 | 1645 | 53.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23992-PA | 622 | GM23992-PA | 1..622 | 1..637 | 3236 | 95.4 | Plus |
Dsec\GM17976-PA | 672 | GM17976-PA | 23..642 | 1..618 | 1630 | 51.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18795-PA | 636 | GD18795-PA | 1..636 | 1..637 | 3353 | 98.1 | Plus |
Dsim\GD22613-PA | 81 | GD22613-PA | 1..60 | 64..123 | 237 | 68.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23531-PA | 640 | GJ23531-PA | 3..638 | 1..635 | 2754 | 79.6 | Plus |
Dvir\GJ12525-PA | 684 | GJ12525-PA | 57..655 | 24..618 | 1623 | 52.6 | Plus |
Translation from 134 to 2047
> HL01076.hyp MKFSVVVLVALLPLLGAVSANRTFVVDYEKDQFLKDGEPFRFIAGSFHYF RAHPATWQRHLRTMRAAGLNAVTTYVEWSLHNPRDGVYVWSGIADLEHFI RLAVGEDLLVILRPGPYICAERDMGGFPYWLLNKYPGIQLRTADVNYLSE IRIWYTQLFAKMNKYLYGNGGPIIMVQVENEYGSFYACDLNYRNWLRDET ESHVKGQAVLFTNDGPSVLRCGKIQGVLATMDFGATNDLKPIWAKFRRYQ PKGPLVNAEYYPGWLTHWTEPMANVSTQSITSTFINMLDHGASVNFYMFY GGTNFGFTAGANDIGPGNYMADITSYDYDAPMTEAGDPTPKYQALRRIIG RYLPLPNQPVPGPVPKRSYGTVRLTTCCSLLSSEARSRLSTGFVQSAKPK SFEALGQYSGLVLYETWLPSFQRDPSILSVPGLADRGYVYVDGEFVGILA RETPVFELPLSASAGRRFQIIVENQGRINYGRQLNDFKGILRDVRLDKQV LSNWNMTQFPLESYDNLEQLITQSDEAVRQGFQELKKLRTMLRTGPAIYH GQLDIQKESDLADTYLDMSGWGKGIVFVNGENLGRYWPLVGPQVTLYVPA AVLKAGSNRLVVVEYQQTPASQELHFRDTPILNARTV*