BDGP Sequence Production Resources |
Search the DGRC for HL01112
Library: | HL |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 11 |
Well: | 12 |
Vector: | pBS SK- |
Associated Gene/Transcript | eIF2B-alpha-RA |
Protein status: | HL01112.pep: gold |
Preliminary Size: | 1174 |
Sequenced Size: | 999 |
Gene | Date | Evidence |
---|---|---|
CG7883 | 2001-01-01 | Release 2 assignment |
CG7883 | 2001-10-10 | Blastp of sequenced clone |
CG7883 | 2003-01-01 | Sim4 clustering to Release 3 |
eIF2B-alpha | 2008-04-29 | Release 5.5 accounting |
eIF2B-alpha | 2008-08-15 | Release 5.9 accounting |
eIF2B-alpha | 2008-12-18 | 5.12 accounting |
999 bp (999 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060991
> HL01112.complete AACGTGCAGCGGTAGGCTTTCACAATTTCATAAAAATGCCGCAAATTACG GAAAATGGCCAGGATTTTGATGTGGTCAAATACTTCCTGCAGCTCCTGGA CGAGGACAAGGATCTGTCCTCCGGCATTGCGGCTATCAGGACTCTGCTAA TGATCCTGGAAAAGAAACAATTTGGAACCATTCATATTCTACACACAACC ATGAGGGAAGCGGTGGCTGCCATGCGGAATACGGATTTGTCTATAGCAGC CATTGTTTCTGCCGGAGAGCTCTTTTGCAGGTTCATCACCCTCAGTCTGG ACGACAAGCACATGGAGGAGTGCCGGCAGATTATGTTGAATCGCGGAAAA ATCTTCCTCACCAAGTTGCTCAATTCCCGGCAGGTGATTGCCCAGCAGGC CCAAAGGTTCATTACCGATGGCTGCCGTATATTGACGCACTCCCGATCCC GGGTGGTCCTCAAGGCGCTGATTACAGCCTCGCAGAACAAAAAGTCCTTC CACGTTTATGTGACGCAGGGCGGCACGGGAAACTCTGGCGAAGAGATGGT TAAGGATCTGCATGCGGCCGGCATCGATTGCACGCTCATTCTGGACTCAG CCACCGGCTATGTTATGGAATCGGTGGACTTTGTGCTTGTGGGGGCTGAA GCCGTGGTGGAGAGTGGTGGCATTATCAACCGCATTGGCACCTACACCAT GGGTCTGTGCGCCCGTGAGATGAAGAAACCTTTCTACGTTCTGGCCGAAA GCTTCAAGTTCAGCCGTCTGTATCCACTCAATCAGCGCGATCTGCCAAAC GAGTACAAGTACTCCCGCAAACACCTAAACGATGTAAGCAAAGTGCACCC GCTGGTCGACTATACGCCACCCGTCTACATCACCCTGCTCTTCACCGACC TCGGAAGACTAACACCCTCGGCCGTAAGCGACGAGTTGATCAAACTCTAC ATGTAAGGGCGAATAAAGATATTGCACTTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF2B-alpha-RA | 1036 | eIF2B-alpha-RA | 49..1030 | 1..982 | 4910 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 25757242..25757513 | 809..538 | 1345 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 25757788..25758001 | 385..172 | 1055 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 25757013..25757184 | 979..808 | 845 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 25757568..25757725 | 538..381 | 790 | 100 | Minus |
chr3R | 27901430 | chr3R | 25758063..25758165 | 171..69 | 500 | 99 | Minus |
chr3R | 27901430 | chr3R | 25758224..25758292 | 69..1 | 330 | 98.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 29934811..29935082 | 809..538 | 1360 | 100 | Minus |
3R | 32079331 | 3R | 29935357..29935570 | 385..172 | 1070 | 100 | Minus |
3R | 32079331 | 3R | 29934579..29934753 | 982..808 | 875 | 100 | Minus |
3R | 32079331 | 3R | 29935137..29935294 | 538..381 | 790 | 100 | Minus |
3R | 32079331 | 3R | 29935633..29935735 | 171..69 | 515 | 100 | Minus |
3R | 32079331 | 3R | 29935794..29935862 | 69..1 | 345 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 29675642..29675913 | 809..538 | 1360 | 100 | Minus |
3R | 31820162 | 3R | 29676188..29676401 | 385..172 | 1070 | 100 | Minus |
3R | 31820162 | 3R | 29675410..29675584 | 982..808 | 875 | 100 | Minus |
3R | 31820162 | 3R | 29675968..29676125 | 538..381 | 790 | 100 | Minus |
3R | 31820162 | 3R | 29676464..29676566 | 171..69 | 515 | 100 | Minus |
3R | 31820162 | 3R | 29676625..29676693 | 69..1 | 345 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 25757013..25757182 | 810..979 | 99 | <- | Minus |
chr3R | 25757242..25757512 | 539..809 | 99 | <- | Minus |
chr3R | 25757568..25757722 | 384..538 | 100 | <- | Minus |
chr3R | 25757790..25758001 | 172..383 | 99 | <- | Minus |
chr3R | 25758063..25758164 | 70..171 | 99 | <- | Minus |
chr3R | 25758224..25758292 | 1..69 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-alpha-RA | 1..921 | 36..956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-alpha-RA | 1..921 | 36..956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-alpha-RA | 1..921 | 36..956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-alpha-RA | 1..921 | 36..956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-alpha-RA | 1..921 | 36..956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-alpha-RA | 15..993 | 1..979 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-alpha-RA | 15..993 | 1..979 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-alpha-RA | 27..1005 | 1..979 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-alpha-RA | 15..993 | 1..979 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-alpha-RA | 27..1005 | 1..979 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29934582..29934751 | 810..979 | 100 | <- | Minus |
3R | 29934811..29935081 | 539..809 | 100 | <- | Minus |
3R | 29935137..29935291 | 384..538 | 100 | <- | Minus |
3R | 29935359..29935570 | 172..383 | 100 | <- | Minus |
3R | 29935633..29935734 | 70..171 | 100 | <- | Minus |
3R | 29935794..29935862 | 1..69 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29934582..29934751 | 810..979 | 100 | <- | Minus |
3R | 29934811..29935081 | 539..809 | 100 | <- | Minus |
3R | 29935137..29935291 | 384..538 | 100 | <- | Minus |
3R | 29935359..29935570 | 172..383 | 100 | <- | Minus |
3R | 29935633..29935734 | 70..171 | 100 | <- | Minus |
3R | 29935794..29935862 | 1..69 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29934582..29934751 | 810..979 | 100 | <- | Minus |
3R | 29934811..29935081 | 539..809 | 100 | <- | Minus |
3R | 29935137..29935291 | 384..538 | 100 | <- | Minus |
3R | 29935359..29935570 | 172..383 | 100 | <- | Minus |
3R | 29935633..29935734 | 70..171 | 100 | <- | Minus |
3R | 29935794..29935862 | 1..69 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 25760304..25760473 | 810..979 | 100 | <- | Minus |
arm_3R | 25760859..25761013 | 384..538 | 100 | <- | Minus |
arm_3R | 25760533..25760803 | 539..809 | 100 | <- | Minus |
arm_3R | 25761081..25761292 | 172..383 | 100 | <- | Minus |
arm_3R | 25761355..25761456 | 70..171 | 100 | <- | Minus |
arm_3R | 25761516..25761584 | 1..69 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29675642..29675912 | 539..809 | 100 | <- | Minus |
3R | 29675968..29676122 | 384..538 | 100 | <- | Minus |
3R | 29676190..29676401 | 172..383 | 100 | <- | Minus |
3R | 29676464..29676565 | 70..171 | 100 | <- | Minus |
3R | 29676625..29676693 | 1..69 | 100 | Minus | |
3R | 29675413..29675582 | 810..979 | 100 | <- | Minus |
Translation from 2 to 955
> HL01112.hyp RAAVGFHNFIKMPQITENGQDFDVVKYFLQLLDEDKDLSSGIAAIRTLLM ILEKKQFGTIHILHTTMREAVAAMRNTDLSIAAIVSAGELFCRFITLSLD DKHMEECRQIMLNRGKIFLTKLLNSRQVIAQQAQRFITDGCRILTHSRSR VVLKALITASQNKKSFHVYVTQGGTGNSGEEMVKDLHAAGIDCTLILDSA TGYVMESVDFVLVGAEAVVESGGIINRIGTYTMGLCAREMKKPFYVLAES FKFSRLYPLNQRDLPNEYKYSRKHLNDVSKVHPLVDYTPPVYITLLFTDL GRLTPSAVSDELIKLYM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF2B-alpha-PA | 306 | CG7883-PA | 1..306 | 12..317 | 1551 | 100 | Plus |
eIF2B-delta-PD | 576 | CG10315-PD | 299..564 | 54..308 | 211 | 26.9 | Plus |
eIF2B-delta-PB | 576 | CG10315-PB | 299..564 | 54..308 | 211 | 26.9 | Plus |
eIF2B-delta-PC | 576 | CG10315-PC | 299..564 | 54..308 | 211 | 26.9 | Plus |
eIF2B-delta-PA | 626 | CG10315-PA | 349..614 | 54..308 | 211 | 26.9 | Plus |
Translation from 35 to 955
> HL01112.pep MPQITENGQDFDVVKYFLQLLDEDKDLSSGIAAIRTLLMILEKKQFGTIH ILHTTMREAVAAMRNTDLSIAAIVSAGELFCRFITLSLDDKHMEECRQIM LNRGKIFLTKLLNSRQVIAQQAQRFITDGCRILTHSRSRVVLKALITASQ NKKSFHVYVTQGGTGNSGEEMVKDLHAAGIDCTLILDSATGYVMESVDFV LVGAEAVVESGGIINRIGTYTMGLCAREMKKPFYVLAESFKFSRLYPLNQ RDLPNEYKYSRKHLNDVSKVHPLVDYTPPVYITLLFTDLGRLTPSAVSDE LIKLYM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16217-PA | 306 | GF16217-PA | 1..306 | 1..306 | 1551 | 94.8 | Plus |
Dana\GF13053-PA | 655 | GF13053-PA | 450..643 | 116..297 | 214 | 33.5 | Plus |
Dana\GF22448-PA | 352 | GF22448-PA | 130..345 | 97..305 | 184 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11983-PA | 306 | GG11983-PA | 1..306 | 1..306 | 1633 | 100 | Plus |
Dere\GG22851-PA | 630 | GG22851-PA | 425..618 | 116..297 | 200 | 31.4 | Plus |
Dere\GG18621-PA | 352 | GG18621-PA | 130..345 | 97..305 | 190 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22202-PA | 306 | GH22202-PA | 1..306 | 1..306 | 1541 | 92.8 | Plus |
Dgri\GH21224-PA | 642 | GH21224-PA | 437..630 | 116..297 | 200 | 31.4 | Plus |
Dgri\GH12777-PA | 352 | GH12777-PA | 101..345 | 65..305 | 184 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF2Balpha-PA | 306 | CG7883-PA | 1..306 | 1..306 | 1551 | 100 | Plus |
eIF2Bdelta-PD | 576 | CG10315-PD | 299..564 | 43..297 | 211 | 26.9 | Plus |
eIF2Bdelta-PB | 576 | CG10315-PB | 299..564 | 43..297 | 211 | 26.9 | Plus |
eIF2Bdelta-PC | 576 | CG10315-PC | 299..564 | 43..297 | 211 | 26.9 | Plus |
eIF2Bdelta-PA | 626 | CG10315-PA | 349..614 | 43..297 | 211 | 26.9 | Plus |
eIF2Bbeta-PA | 352 | CG2677-PA | 130..345 | 97..305 | 180 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21971-PA | 306 | GI21971-PA | 1..306 | 1..306 | 1525 | 91.2 | Plus |
Dmoj\GI20509-PA | 643 | GI20509-PA | 438..631 | 116..297 | 204 | 31.4 | Plus |
Dmoj\GI15870-PA | 352 | GI15870-PA | 130..345 | 97..305 | 163 | 26.3 | Plus |
Dmoj\GI10562-PA | 362 | GI10562-PA | 97..359 | 74..304 | 153 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13494-PA | 306 | GL13494-PA | 1..306 | 1..306 | 1533 | 93.5 | Plus |
Dper\GL16909-PA | 632 | GL16909-PA | 427..620 | 116..297 | 204 | 32.5 | Plus |
Dper\GL19913-PA | 352 | GL19913-PA | 130..345 | 97..305 | 186 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20657-PA | 306 | GA20657-PA | 1..306 | 1..306 | 1533 | 93.5 | Plus |
Dpse\GA10239-PA | 572 | GA10239-PA | 367..560 | 116..297 | 204 | 32.5 | Plus |
Dpse\GA15423-PA | 352 | GA15423-PA | 130..345 | 97..305 | 186 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12201-PA | 306 | GM12201-PA | 1..306 | 1..306 | 1628 | 99.7 | Plus |
Dsec\GM16009-PA | 630 | GM16009-PA | 432..618 | 123..297 | 201 | 31.6 | Plus |
Dsec\GM19241-PA | 352 | GM19241-PA | 130..345 | 97..305 | 184 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17524-PA | 306 | GD17524-PA | 1..306 | 1..306 | 1628 | 99.7 | Plus |
Dsim\GD11760-PA | 630 | GD11760-PA | 432..618 | 123..297 | 202 | 31.6 | Plus |
Dsim\GD16616-PA | 352 | GD16616-PA | 130..345 | 97..305 | 184 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14332-PA | 306 | GJ14332-PA | 1..306 | 1..306 | 1503 | 90.2 | Plus |
Dvir\GJ22361-PA | 593 | GJ22361-PA | 357..581 | 86..297 | 198 | 29.4 | Plus |
Dvir\GJ18516-PA | 352 | GJ18516-PA | 130..345 | 97..305 | 192 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14086-PA | 306 | GK14086-PA | 1..306 | 1..306 | 1521 | 92.5 | Plus |
Dwil\GK23180-PA | 598 | GK23180-PA | 321..586 | 43..297 | 189 | 28 | Plus |
Dwil\GK19802-PA | 352 | GK19802-PA | 130..345 | 97..305 | 184 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10409-PA | 306 | GE10409-PA | 1..306 | 1..306 | 1632 | 99.7 | Plus |
Dyak\GE14287-PA | 636 | GE14287-PA | 438..624 | 123..297 | 199 | 31.6 | Plus |
Dyak\GE16274-PA | 352 | GE16274-PA | 130..345 | 97..305 | 184 | 28.1 | Plus |