BDGP Sequence Production Resources |
Search the DGRC for HL01138
Library: | HL |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 11 |
Well: | 38 |
Vector: | pBS SK- |
Associated Gene/Transcript | Fie-RA |
Protein status: | HL01138.pep: gold |
Preliminary Size: | 1643 |
Sequenced Size: | 1440 |
Gene | Date | Evidence |
---|---|---|
CG1079 | 2001-01-01 | Release 2 assignment |
CG1079 | 2001-10-10 | Blastp of sequenced clone |
CG1079 | 2003-01-01 | Sim4 clustering to Release 3 |
Fie | 2008-04-29 | Release 5.5 accounting |
Fie | 2008-08-15 | Release 5.9 accounting |
Fie | 2008-12-18 | 5.12 accounting |
1440 bp (1440 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060992
> HL01138.complete CAGCCGCGGAACAGTTGCGTCGCTCCTTGATTAGCTGAATAAGCGGGAAA AATCCATAAATTGATTAAGTAAAACTCGGAAAACTAAAGTGAAATGCTGC TGCCAACGGTCAGCGGCCAATCCGCCGCAGGATGCAAATGGAAAAACTGC TGTCGCCGCAGCTGGGAAATGCTGATGGCGCCCGTATCGCCCAAGAACCT CAGGACCACGGCGCTCTTGACGAGCATCTACCAGTTGTTAATCTCCCACT GCGCCCTTTTCCTGGTTCTCCTGGGACTGGCGCATGCCGAACAGATGTGC GAGGTGCTGGAGCTGGACATCTTGGACCAGAAGGACAATGGTTTCTACAA CATGTCGCCCTTTCACAACGATCTTCGCCTGCAAACCGCTGCCCAATTGG CCGTCGCCACGGAGAATCTGCTCTACGTGATGGCTGGTATCGCGGGTACC TACGCCCTGAGTGCCATATTCCTGTTTTTCGGAGTCTTCAAAAATCGGCC GGGCCTAATCATACCCTGGCTGGTTGTGGAGTTCCTATTAATGATTGGTT TGGGGGCACTGGTCTTCATGCTGAGGGATACAAAAATCGTGCAATTGCTG GGTGGTCAAGTGCCCTACTTTATCATTTGCTACATCTTGATCTGCATGGA TTACTGCAAGTGGTATGTGATGCATAGCTTCTACCAGAGTCTACGCACCA TGAATAAGCTTCGAGAGATTGCCACTGTGGCCATACCATGTCCAGCTCCA GGAGCCATACCCTATCGTTTCCAACGCGAGCACATGTATCTGGGCAGCAA TGGATATAAGCACATTCTAACCGAGTCTCCCGATGGACAGTGTTAAACAT GTACTGAAAGATTGGATATTTTTGGAACTTCCCATCAGGTGTCTTGATTG CAATTGCACTGCAAATTCTGTATTGCAAAACAGAGTGTGATATGGTTTTG GTAGAGATACTATTTTATATAGCCAACGGACATGGAGCGGCTTATTAGAA ATGCAGAATCGGTTCAAAGCGTTCGGCGATTAAACTATAAACTATTTTTG TGTAGAAATAGCTCCCAAAGCACCTTAAAAAATAAAAAAAATAATAATAA TATTTGGTCACTAACGCGACTCGAACTCGGAACTTCGAAGCGAAGGTCGC ACTCTCTAACCCCTAGGCTACGGCAGCGAAACTCTCGGGATAGCCGAGAT TGATTAAGCCCCAAAATCTTGAAACGAAAAACTTGTCTTAAATAAATTGG CGTTCATACAAATATGTATTGTAGCAACGAATTTTTTAAAGCTTAGTTTC TCAGTAGATTTACCACTACTTAACTATAATATGCCTTAAATTCTGTTGAC TAGCAATATTTTAGGTATTTCTATTTTGTGGCACAGAACGAATATCAAAT AAAAGTGCAAAATTGTAACATAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 3893608..3894273 | 757..1421 | 3130 | 98.3 | Plus |
chr3L | 24539361 | chr3L | 3892972..3893354 | 237..619 | 1855 | 99 | Plus |
chr3L | 24539361 | chr3L | 3892193..3892433 | 1..241 | 1145 | 98.3 | Plus |
chr3L | 24539361 | chr3L | 3893417..3893553 | 620..756 | 670 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 3894169..3894834 | 757..1422 | 3330 | 100 | Plus |
3L | 28110227 | 3L | 3893532..3893914 | 237..619 | 1915 | 100 | Plus |
3L | 28110227 | 3L | 3892753..3892993 | 1..241 | 1190 | 99.6 | Plus |
3L | 28110227 | 3L | 3893978..3894114 | 620..756 | 685 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 3894169..3894834 | 757..1422 | 3330 | 100 | Plus |
3L | 28103327 | 3L | 3893532..3893914 | 237..619 | 1915 | 100 | Plus |
3L | 28103327 | 3L | 3892753..3892993 | 1..241 | 1190 | 99.5 | Plus |
3L | 28103327 | 3L | 3893978..3894114 | 620..756 | 685 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 5913..5984 | 1340..1413 | 121 | 66.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 3893417..3893553 | 620..756 | 99 | -> | Plus |
chr3L | 3892193..3892429 | 1..237 | 98 | -> | Plus |
chr3L | 3892973..3893354 | 238..619 | 98 | -> | Plus |
chr3L | 3893608..3894273 | 757..1421 | 93 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fie-RA | 1..753 | 94..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fie-RA | 1..753 | 94..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fie-RA | 1..753 | 94..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fie-RA | 1..753 | 94..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fie-RA | 1..753 | 94..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fie-RA | 180..1600 | 1..1421 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fie-RA | 180..1600 | 1..1421 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fie-RA | 180..1600 | 1..1421 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fie-RA | 180..1600 | 1..1421 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fie-RA | 180..1600 | 1..1421 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3892753..3892989 | 1..237 | 100 | -> | Plus |
3L | 3893533..3893914 | 238..619 | 100 | -> | Plus |
3L | 3893978..3894114 | 620..756 | 100 | -> | Plus |
3L | 3894169..3894833 | 757..1421 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3892753..3892989 | 1..237 | 100 | -> | Plus |
3L | 3893533..3893914 | 238..619 | 100 | -> | Plus |
3L | 3893978..3894114 | 620..756 | 100 | -> | Plus |
3L | 3894169..3894833 | 757..1421 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3892753..3892989 | 1..237 | 100 | -> | Plus |
3L | 3893533..3893914 | 238..619 | 100 | -> | Plus |
3L | 3893978..3894114 | 620..756 | 100 | -> | Plus |
3L | 3894169..3894833 | 757..1421 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 3892753..3892989 | 1..237 | 100 | -> | Plus |
arm_3L | 3893533..3893914 | 238..619 | 100 | -> | Plus |
arm_3L | 3893978..3894114 | 620..756 | 100 | -> | Plus |
arm_3L | 3894169..3894833 | 757..1421 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3892753..3892989 | 1..237 | 100 | -> | Plus |
3L | 3893533..3893914 | 238..619 | 100 | -> | Plus |
3L | 3893978..3894114 | 620..756 | 100 | -> | Plus |
3L | 3894169..3894833 | 757..1421 | 100 | Plus |
Translation from 93 to 845
> HL01138.pep MLLPTVSGQSAAGCKWKNCCRRSWEMLMAPVSPKNLRTTALLTSIYQLLI SHCALFLVLLGLAHAEQMCEVLELDILDQKDNGFYNMSPFHNDLRLQTAA QLAVATENLLYVMAGIAGTYALSAIFLFFGVFKNRPGLIIPWLVVEFLLM IGLGALVFMLRDTKIVQLLGGQVPYFIICYILICMDYCKWYVMHSFYQSL RTMNKLREIATVAIPCPAPGAIPYRFQREHMYLGSNGYKHILTESPDGQC *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24229-PA | 250 | GF24229-PA | 1..250 | 1..250 | 1186 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15166-PA | 250 | GG15166-PA | 1..250 | 1..250 | 1317 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16431-PA | 246 | GH16431-PA | 1..246 | 1..250 | 1020 | 76.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fie-PB | 250 | CG1079-PB | 1..250 | 1..250 | 1324 | 100 | Plus |
Fie-PA | 250 | CG1079-PA | 1..250 | 1..250 | 1324 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12515-PA | 241 | GI12515-PA | 1..241 | 1..250 | 955 | 72 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22361-PA | 170 | GL22361-PA | 1..170 | 49..250 | 622 | 59.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10560-PA | 242 | GA10560-PA | 7..242 | 15..250 | 977 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14595-PA | 250 | GM14595-PA | 1..250 | 1..250 | 1327 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17625-PA | 250 | GD17625-PA | 1..250 | 1..250 | 1330 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12420-PA | 244 | GJ12420-PA | 1..243 | 1..249 | 979 | 73.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20530-PA | 238 | GK20530-PA | 4..238 | 15..250 | 1014 | 80.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21385-PA | 250 | GE21385-PA | 1..250 | 1..250 | 1301 | 97.2 | Plus |
Translation from 93 to 845
> HL01138.hyp MLLPTVSGQSAAGCKWKNCCRRSWEMLMAPVSPKNLRTTALLTSIYQLLI SHCALFLVLLGLAHAEQMCEVLELDILDQKDNGFYNMSPFHNDLRLQTAA QLAVATENLLYVMAGIAGTYALSAIFLFFGVFKNRPGLIIPWLVVEFLLM IGLGALVFMLRDTKIVQLLGGQVPYFIICYILICMDYCKWYVMHSFYQSL RTMNKLREIATVAIPCPAPGAIPYRFQREHMYLGSNGYKHILTESPDGQC *