Clone HL02152 Report

Search the DGRC for HL02152

Clone and Library Details

Library:HL
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1997-11-24
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:21
Well:52
Vector:pBS SK-
Associated Gene/Transcriptl(2)35Di-RB
Protein status:HL02152.pep: wuzgold
Sequenced Size:1396

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
l(2)35Di 2008-04-29 Release 5.5 accounting
l(2)35Di 2008-08-15 Release 5.9 accounting
l(2)35Di 2008-12-18 5.12 accounting

Clone Sequence Records

HL02152.complete Sequence

1396 bp (1396 high quality bases) assembled on 2005-05-31

GenBank Submission: BT023709

> HL02152.complete
TCCGATTAAATTATACAATTGTTGGCGTTTTCCAACGTCCACATCGCAAA
GTTCGAAAACAAACGGTCCAAAATGGTAGCTGGTGGTGCCTCGGAAACGG
GCGGCGTGAAGCCGATGGTAATTGCGGGCCGCATGGTGCGGGAGCGTGAG
CGCCTGATCGGCATGTCGCCGGAGGAGCGCGCCTGGCGCAAACAGTGGCT
GAAGGACCAGGAGCTGCACCATGGACCCCGCAAGGTGCCCGCCCTGGAGC
TGGAGCTGAACAACCCCATCAAGCGCTTCTACCGCGCTCCCCTCGACAAG
GTCTGCAATGTTTTGGAACCCGTCCTGGGCTTTCAGCGCGCGTACACCGT
GCGCTTCTGGACCGGAAAGGCTCTGCTCGCCCTAACCGGAATCTACGCCG
GCGCCTACTACTTCAAGTACAACCAGAATGTAAGTAATTGGTCGAGGATT
CAAGTTGGCTATTACTATAAGTCATTCCAAATGTACTAATGCATGGTATC
GGAAGTTAATGTATCTCAACTATAGTTAGTTGCAATAGAAAAGTGTGTTC
ATAGGGAAAATAACTTCAGGCCCACGCTTTTCATTATATGCAAATTGGCA
AAACGTATCCACTACACTATCTTAAAACTATACTAGTCTTAAAACATAAT
AAATTTAAATCAAAACCATCACGTAAAGAATTTAAAATAGGCCAATCCTT
GTGTATGCCCATGTACTATAAAAACTGGCTCATCATTGGCTAAAATTCCA
AAAACTTTCAAATGTAACTAACATATCATGTATATTTTAAATGTAAGAAT
TGTTATCAATTTCAAACTTACTTTATAATGTTATAAAAGTTATTTTTATA
ATGAACCTATGGTATTACTCGTATTGTTGCTTTGTATTTTTAAGCGCTTA
AGAGCTGTAAAAACGGTTGAATTTAAAAGTTGTGATAGTCTTGAAAGTTA
CATTTTTGTTTCTATAAATTAAGGAAATTCTTATAGATAGTTTTAGTTTT
ATTGCTCTAAAGACCTTATACTTAATGCATATACTTAAGATCGCCTTCTT
TCAACAAATTAGCTGTGTTTCATCGTTTAATATATATATATTATATGCAT
AGTTTAATGTATAACCCTTTTATTTAAGGACTGGACCCGGAAGGGCGGCT
GGCGTGTGATTCACTCGCGCAAGCAGTGCGTGCCCGGAGATGAGGGCTAT
CCCAAGGTCTCCGATCGATCGGCGCCTTCCGATTACGCGGCTCGCGGATT
CAACGAGTCGCCGCTGAAAGCTTGAAGAGATGATCGTCCCCGAGCTGGCT
TAGTGATTTTGCTTAAGTTTGAAACGTAAAATTAATAATATCAAAACAAA
AATCGCAATAAATATGGAAACGAAAACACAAAAAAAAAAAAAAAAA

HL02152.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:36:24
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)35Di-RB 736 l(2)35Di-RB 79..736 1..658 3290 100 Plus
l(2)35Di-RA 901 l(2)35Di-RA 108..537 1..430 2150 100 Plus
l(2)35Di-RA 901 l(2)35Di-RA 537..790 1129..1382 1270 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:54:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 15748317..15749367 1379..327 4485 95.4 Minus
chr2L 23010047 chr2L 15749436..15749763 328..1 1640 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:27:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:54:07
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15749598..15750652 1382..327 5140 99.3 Minus
2L 23513712 2L 15750721..15751048 328..1 1640 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:26:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15749598..15750652 1382..327 5150 99.3 Minus
2L 23513712 2L 15750721..15751048 328..1 1640 100 Minus
Blast to na_te.dros performed 2019-03-15 16:54:08
Subject Length Description Subject Range Query Range Score Percent Strand
McClintock 6450 McClintock McCLINTOCK 6450bp 896..1185 1108..818 122 55.7 Minus
Bari1 1728 Bari1 DMBARI1 1728bp AKA(S55767) Derived from X67681 (g7640) (Rel. 36, Last updated, Version 6). 1367..1456 917..1010 118 61.7 Plus
1360 3409 1360 1360 3409bp 2472..2823 1087..741 117 53.5 Minus
Quasimodo 7387 Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. 5994..6081 861..774 115 63.3 Minus
P-element 2907 P-element PPI251 2907bp AKA(V01520,X69493) Derived from X06779 (g58305) (Rel. 49, Last updated, Version 8). 438..528 826..740 112 61.5 Minus
invader1 4032 invader1 INVADER 4032bp 3400..3529 754..618 111 59.3 Minus

HL02152.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:55:16 Download gff for HL02152.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 15748317..15748800 896..1379 94 == Minus
chr2L 15748801..15749366 328..882 94 <- Minus
chr2L 15749437..15749763 1..327 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:11:49 Download gff for HL02152.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)35Di-RB 1..417 73..489 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:01:22 Download gff for HL02152.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)35Di-RB 1..417 73..489 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed on 2013-08-04 02:23:52 has no hits.
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:41:54 Download gff for HL02152.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)35Di-RB 1..417 73..489 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed on 2014-11-26 21:20:28 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:44:59 Download gff for HL02152.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)35Di-RB 7..577 1..571 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:01:22 Download gff for HL02152.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)35Di-RB 7..577 1..571 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 02:23:52 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:41:54 Download gff for HL02152.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)35Di-RB 7..577 1..571 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-26 21:20:28 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:55:16 Download gff for HL02152.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15749601..15750651 328..1379 99 <- Minus
2L 15750722..15751048 1..327 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:55:16 Download gff for HL02152.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15749601..15750651 328..1379 99 <- Minus
2L 15750722..15751048 1..327 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:55:16 Download gff for HL02152.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15749601..15750651 328..1379 99 <- Minus
2L 15750722..15751048 1..327 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:23:52 Download gff for HL02152.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15749601..15750651 328..1379 99 <- Minus
arm_2L 15750722..15751048 1..327 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:20:53 Download gff for HL02152.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15749601..15750651 328..1379 99 <- Minus
2L 15750722..15751048 1..327 100   Minus

HL02152.hyp Sequence

Translation from 72 to 488

> HL02152.hyp
MVAGGASETGGVKPMVIAGRMVRERERLIGMSPEERAWRKQWLKDQELHH
GPRKVPALELELNNPIKRFYRAPLDKVCNVLEPVLGFQRAYTVRFWTGKA
LLALTGIYAGAYYFKYNQNVSNWSRIQVGYYYKSFQMY*

HL02152.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 09:54:41
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)35Di-PC 167 CG13240-PC 1..123 1..125 638 96.8 Plus
l(2)35Di-PA 167 CG13240-PA 1..123 1..125 638 96.8 Plus

HL02152.pep Sequence

Translation from 72 to 488

> HL02152.pep
MVAGGASETGGVKPMVIAGRMVRERERLIGMSPEERAWRKQWLKDQELHH
GPRKVPALELELNNPIKRFYRAPLDKVCNVLEPVLGFQRAYTVRFWTGKA
LLALTGIYAGAYYFKYNQNVSNWSRIQVGYYYKSFQMY*

HL02152.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:58:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14976-PA 165 GF14976-PA 1..123 1..125 581 85.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:58:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24196-PA 167 GG24196-PA 1..123 1..125 627 94.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:58:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13252-PA 165 GH13252-PA 1..123 1..125 604 88 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
ND-B17-PC 167 CG13240-PC 1..123 1..125 638 96.8 Plus
ND-B17-PA 167 CG13240-PA 1..123 1..125 638 96.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:58:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17291-PA 165 GI17291-PA 1..123 1..125 580 86.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:58:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15438-PA 165 GL15438-PA 1..123 1..125 594 88 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:58:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12146-PA 165 GA12146-PA 1..123 1..125 594 88 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:58:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14221-PA 167 GM14221-PA 1..123 1..125 625 94.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:58:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21943-PA 167 GD21943-PA 1..123 1..125 625 94.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:58:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17901-PA 165 GJ17901-PA 1..123 1..125 595 88.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:58:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24273-PA 165 GK24273-PA 1..123 1..125 606 90.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:58:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19391-PA 167 GE19391-PA 1..123 1..125 631 95.2 Plus