BDGP Sequence Production Resources |
Search the DGRC for HL02883
Library: | HL |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 28 |
Well: | 83 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG1129-RA |
Protein status: | HL02883.pep: gold |
Preliminary Size: | 1963 |
Sequenced Size: | 1715 |
Gene | Date | Evidence |
---|---|---|
CG1129 | 2001-01-01 | Release 2 assignment |
CG1129 | 2001-10-10 | Blastp of sequenced clone |
CG1129 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1129 | 2008-04-29 | Release 5.5 accounting |
CG1129 | 2008-08-15 | Release 5.9 accounting |
CG1129 | 2008-12-18 | 5.12 accounting |
1715 bp (1715 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061013
> HL02883.complete CCAGCTCGGTTTTTATTTACTTTCCTGCAAGTGCATCCAACCAGAAGCAC AAAGGTTCTTATCACGAAAAAAGACAATTCCAAAAACAACAACAAGGAAA TAGATAGCGCAACAAGTTGTTTGACCGCTGAAACGGAATCTCGTTGTACG GAGAAAGTCTCGAGAACTTTAAGGTGTGACGTGTCGCTCGCTTACGGACT ATAGAAACCGGAGAACGGAAAGGAGGCGGAAGCGGAAGCGGAGAAGTGAT GTGTGGAAATCCAGCTGTGGGAAACGGGACGAGGGCGTTGATTCTGGTCG GTGGTTATGGGACCCGGCTGCGACCCCTGACCCTCAGCACGCCCAAGCCA CTGGTGGAGTTTGCCAATAAGCCGATTCTTCTCCACCAACTGGAGGCACT CGTCGATGCGGGATGTCGTCAGGTTATTTTAGCCGTCAGCTATCGAGCCG AGCAAATGGAAAAGGAGCTTAAAGTCGAAGCCAAGAAACTGGGCGTGGAA TTGATCTTCTCACACGAGACGGAACCCCTGGGAACAGCTGGACCTCTGGC CCTAGCAAAAACGATTTTAGCAGCCAGCTCAGAGCCATTTTTCGTGCTCA ATTCGGACGTTATATGCGATTTTCCATTTAAACAACTAGTGCAATTCCAT TGTAATCACGGAAAAGAAGGCACAATTGTTGTCACAAAGGTCGAAGAACC ATCCAAATACGGAGTTGTGCTGTACGATGAGAACGGCTGTATAAAAAACT TTATTGAAAAGCCACAAGAGTTCGTTAGCAATAAGATCAATGCCGGCATT TACATCTTTAATCCCTCCGTGCTTGACCGGATCGAAGTTAAGCCCACATC AATAGAGAAGGAGGTGTTCCCTGAAATGACGCAGCAACAGGAGTTGTATG CAATGGATTTAACTGGATTCTGGATGGACATCGGACAGCCAAAAGACTTC CTAACCGGCATGTGTCTGTATCTAAGCTCGCTGCGCCAGAAGCAATCCCC CAAGCTGTACACAGGCCCTGGAGTGGTGGGCAACGTGTTGGTGGATCCCA CGGCCAAAATCGGCGAGGGTTGTCGCATAGGGCCTAATGTAACCATTGGA CCGGACGTGGTCATCGAGGATGGCGTGTGCATTAAGCGCTCGACCATCCT CAAAGGCGCCATCGTTCGCTCACACTCATGGCTGGACTCCTGCATTGTCG GTTGGCGTTCTACAGTTGGCCGTTGGGTTCGCATCGAAGGCATCACCGTG CTAGGCGAGGATGTAATCGTGAAGGATGAGCTCTACATTAATGGAGGCCA GGTCTTGCCCCATAAAAGCATTGCGGCCAGTGTCCCAGAACCGCAGATCA TTATGTGAGGCGGTGGCCCAAATCATAAATTGTAAATACAATCTATTTTT GTTCAGTTCCGCCGTTTCGGTATTCTATAAAGGTGCCTTTTGCTGAACTG CTCTCACCTACGATTTGCAATATTGACACTATGAAAAAAAAGAATAACAT TTCCAGCAGTTAGCGTTGCTAACTATTTATAAACGCCAGCTCTTTCTCCT TCCCTGGCGAAGGGGGAAAAACTGACTTATAGTTTAAGCTTAATCGCGTT AGTTGAACGTTTTTGTACTTTGATAAGCGAAGCATTAGTTATACTCCTAA AATTCTATACGTTAGTCAAATATATTACATACGTATTTAAAAAATTAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 640982..641721 | 957..1696 | 3700 | 100 | Plus |
chr3R | 27901430 | chr3R | 639932..640470 | 420..958 | 2695 | 100 | Plus |
chr3R | 27901430 | chr3R | 639365..639674 | 115..424 | 1550 | 100 | Plus |
chr3R | 27901430 | chr3R | 639215..639304 | 27..116 | 450 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 4815286..4816029 | 957..1700 | 3720 | 100 | Plus |
3R | 32079331 | 3R | 4814236..4814774 | 420..958 | 2695 | 100 | Plus |
3R | 32079331 | 3R | 4813669..4813978 | 115..424 | 1550 | 100 | Plus |
3R | 32079331 | 3R | 4813519..4813608 | 27..116 | 450 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 4556117..4556860 | 957..1700 | 3720 | 100 | Plus |
3R | 31820162 | 3R | 4555067..4555605 | 420..958 | 2695 | 100 | Plus |
3R | 31820162 | 3R | 4554500..4554809 | 115..424 | 1550 | 100 | Plus |
3R | 31820162 | 3R | 4554350..4554439 | 27..116 | 450 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
G2 | 3102 | G2 G2 3102bp | 170..235 | 820..885 | 114 | 63.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 639050..639075 | 1..26 | 100 | -> | Plus |
chr3R | 639215..639304 | 27..116 | 100 | -> | Plus |
chr3R | 639367..639672 | 117..422 | 100 | -> | Plus |
chr3R | 639935..640469 | 423..957 | 100 | -> | Plus |
chr3R | 640983..641721 | 958..1696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1129-RA | 1..1110 | 249..1358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1129-RA | 1..1110 | 249..1358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1129-RB | 1..1110 | 249..1358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1129-RA | 1..1110 | 249..1358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1129-RA | 1..1110 | 249..1358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1129-RA | 1..1696 | 1..1696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1129-RA | 1..1696 | 1..1696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1129-RA | 20..1715 | 1..1696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1129-RA | 1..1696 | 1..1696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1129-RA | 20..1715 | 1..1696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4813354..4813379 | 1..26 | 100 | -> | Plus |
3R | 4813519..4813608 | 27..116 | 100 | -> | Plus |
3R | 4813671..4813976 | 117..422 | 100 | -> | Plus |
3R | 4814239..4814773 | 423..957 | 100 | -> | Plus |
3R | 4815287..4816025 | 958..1696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4813354..4813379 | 1..26 | 100 | -> | Plus |
3R | 4813519..4813608 | 27..116 | 100 | -> | Plus |
3R | 4813671..4813976 | 117..422 | 100 | -> | Plus |
3R | 4814239..4814773 | 423..957 | 100 | -> | Plus |
3R | 4815287..4816025 | 958..1696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4813354..4813379 | 1..26 | 100 | -> | Plus |
3R | 4813519..4813608 | 27..116 | 100 | -> | Plus |
3R | 4813671..4813976 | 117..422 | 100 | -> | Plus |
3R | 4814239..4814773 | 423..957 | 100 | -> | Plus |
3R | 4815287..4816025 | 958..1696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 639076..639101 | 1..26 | 100 | -> | Plus |
arm_3R | 639241..639330 | 27..116 | 100 | -> | Plus |
arm_3R | 639393..639698 | 117..422 | 100 | -> | Plus |
arm_3R | 639961..640495 | 423..957 | 100 | -> | Plus |
arm_3R | 641009..641747 | 958..1696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4554502..4554807 | 117..422 | 100 | -> | Plus |
3R | 4555070..4555604 | 423..957 | 100 | -> | Plus |
3R | 4556118..4556856 | 958..1696 | 100 | Plus | |
3R | 4554185..4554210 | 1..26 | 100 | -> | Plus |
3R | 4554350..4554439 | 27..116 | 100 | -> | Plus |
Translation from 248 to 1357
> HL02883.pep MCGNPAVGNGTRALILVGGYGTRLRPLTLSTPKPLVEFANKPILLHQLEA LVDAGCRQVILAVSYRAEQMEKELKVEAKKLGVELIFSHETEPLGTAGPL ALAKTILAASSEPFFVLNSDVICDFPFKQLVQFHCNHGKEGTIVVTKVEE PSKYGVVLYDENGCIKNFIEKPQEFVSNKINAGIYIFNPSVLDRIEVKPT SIEKEVFPEMTQQQELYAMDLTGFWMDIGQPKDFLTGMCLYLSSLRQKQS PKLYTGPGVVGNVLVDPTAKIGEGCRIGPNVTIGPDVVIEDGVCIKRSTI LKGAIVRSHSWLDSCIVGWRSTVGRWVRIEGITVLGEDVIVKDELYINGG QVLPHKSIAASVPEPQIIM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18913-PA | 371 | GF18913-PA | 1..371 | 1..369 | 1876 | 96 | Plus |
Dana\GF13377-PA | 438 | GF13377-PA | 3..431 | 12..361 | 403 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12578-PA | 369 | GG12578-PA | 1..369 | 1..369 | 1908 | 98.4 | Plus |
Dere\GG22341-PA | 438 | GG22341-PA | 3..431 | 12..361 | 396 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23007-PA | 371 | GH23007-PA | 1..371 | 1..369 | 1827 | 93 | Plus |
Dgri\GH22966-PA | 438 | GH22966-PA | 3..431 | 12..361 | 409 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1129-PE | 369 | CG1129-PE | 1..369 | 1..369 | 1919 | 100 | Plus |
CG1129-PD | 369 | CG1129-PD | 1..369 | 1..369 | 1919 | 100 | Plus |
CG1129-PA | 369 | CG1129-PA | 1..369 | 1..369 | 1919 | 100 | Plus |
CG1129-PB | 369 | CG1129-PB | 1..369 | 1..369 | 1919 | 100 | Plus |
CG8207-PA | 438 | CG8207-PA | 3..431 | 12..361 | 386 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10243-PA | 371 | GI10243-PA | 1..371 | 1..369 | 1837 | 94.1 | Plus |
Dmoj\GI18780-PA | 161 | GI18780-PA | 1..141 | 1..141 | 617 | 86 | Plus |
Dmoj\GI18813-PA | 161 | GI18813-PA | 1..141 | 1..141 | 617 | 86 | Plus |
Dmoj\GI18453-PA | 438 | GI18453-PA | 3..431 | 12..361 | 400 | 27.7 | Plus |
Dmoj\GI18791-PA | 86 | GI18791-PA | 1..69 | 210..278 | 346 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21618-PA | 371 | GL21618-PA | 1..371 | 1..369 | 1863 | 95.1 | Plus |
Dper\GL11863-PA | 438 | GL11863-PA | 3..431 | 12..361 | 410 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10892-PA | 371 | GA10892-PA | 1..371 | 1..369 | 1863 | 95.1 | Plus |
Dpse\GA20898-PA | 438 | GA20898-PA | 3..431 | 12..361 | 410 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10777-PA | 369 | GM10777-PA | 1..369 | 1..369 | 1929 | 99.2 | Plus |
Dsec\GM20127-PA | 438 | GM20127-PA | 3..431 | 12..361 | 393 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19749-PA | 202 | GD19749-PA | 1..194 | 1..194 | 982 | 96.9 | Plus |
Dsim\GD19750-PA | 132 | GD19750-PA | 1..132 | 238..369 | 681 | 99.2 | Plus |
Dsim\GD25606-PA | 438 | GD25606-PA | 3..431 | 12..361 | 388 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11048-PA | 371 | GJ11048-PA | 1..371 | 1..369 | 1812 | 92.5 | Plus |
Dvir\GJ21538-PA | 436 | GJ21538-PA | 3..429 | 12..361 | 402 | 27.4 | Plus |
Translation from 248 to 1357
> HL02883.hyp MCGNPAVGNGTRALILVGGYGTRLRPLTLSTPKPLVEFANKPILLHQLEA LVDAGCRQVILAVSYRAEQMEKELKVEAKKLGVELIFSHETEPLGTAGPL ALAKTILAASSEPFFVLNSDVICDFPFKQLVQFHCNHGKEGTIVVTKVEE PSKYGVVLYDENGCIKNFIEKPQEFVSNKINAGIYIFNPSVLDRIEVKPT SIEKEVFPEMTQQQELYAMDLTGFWMDIGQPKDFLTGMCLYLSSLRQKQS PKLYTGPGVVGNVLVDPTAKIGEGCRIGPNVTIGPDVVIEDGVCIKRSTI LKGAIVRSHSWLDSCIVGWRSTVGRWVRIEGITVLGEDVIVKDELYINGG QVLPHKSIAASVPEPQIIM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1129-PE | 369 | CG1129-PE | 1..369 | 1..369 | 1919 | 100 | Plus |
CG1129-PD | 369 | CG1129-PD | 1..369 | 1..369 | 1919 | 100 | Plus |
CG1129-PA | 369 | CG1129-PA | 1..369 | 1..369 | 1919 | 100 | Plus |
CG1129-PB | 369 | CG1129-PB | 1..369 | 1..369 | 1919 | 100 | Plus |
CG8207-PA | 438 | CG8207-PA | 3..431 | 12..361 | 386 | 27.9 | Plus |