Clone HL02931 Report

Search the DGRC for HL02931

Clone and Library Details

Library:HL
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1997-11-24
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:29
Well:31
Vector:pBS SK-
Associated Gene/TranscriptCG7214-RA
Protein status:HL02931.pep: gold
Preliminary Size:1241
Sequenced Size:1046

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7214 2001-01-01 Release 2 assignment
CG7214 2002-04-04 Blastp of sequenced clone
CG7214 2003-01-01 Sim4 clustering to Release 3
CG7214 2008-04-29 Release 5.5 accounting
CG7214 2008-08-15 Release 5.9 accounting
CG7214 2008-12-18 5.12 accounting

Clone Sequence Records

HL02931.complete Sequence

1046 bp (1046 high quality bases) assembled on 2002-04-04

GenBank Submission: AY095021

> HL02931.complete
TGAGTATTCAACAAGCACTTCTCCTTCAACAACCCAACTTCAACACCCAC
CCCAAACAAACAACATGAAGTTCGCCGTTGCCGTAGTCATGTTCGTGTGC
GCCCTGGCTGGAGCTCATGCCTCGTGGGCCCAGATCGCTCCCGGTGTGTC
CTATGTGAGCCCCGTGGCCCATGGAGCCGGTCTGTGGAACGGAGCCTGGA
ATGGTGCCTGGAACGGTGCCTGGAACGGCGCCTGGAACGGTGCTCCCTGG
GGTGCCCCTGCCGCCGTTGCCGTCCATGCCAGCGCTGCTCCCTGGGGTCT
GACCGGTGCCGGATGGCACGGCGCTGCTGTTCCCGGAATCAACCTGGCCC
AGGGACCCGGTCTCGCCGCCGGCCATGGCCATGAGGGCGTCTATGTGGCC
AAGACCCGTGGTGCCATCCACACCGCTCCCCTCGCCGGACACATCAACTC
TGCCACCTCCGTGAACGTGGCCCCTGCCCCCGGAACTCTGTAAGTCGGGA
GTGACGGATAAACCATACCCAAACCGATGCCAAACGGAGCGGATGGATGG
CAGTATCACTGATCTCCACCTGCTTCAGCGACTTCCCACGACTACTCCAA
CCGGATGAATACCCATCTCTCTCTGTACACTTATTGTTAAGCACACCGCT
CTTAGTCCCAACCCCCTCGATACGAACACGATCCTGATCTTGGGTCCATG
TCCATATCCTCTGGACATTTTCCAACGCACTCAGCAATATATAAGTCCAA
CAGCAATTACAACAACTACAACAAACCAACAAACGACAGCATGTTAATTT
TCTTTTTTGAGAACTCTTTCAATACTTCCCATCTGCTATCCTGTCTTCCT
CTTCTTTACATCTATCACTATATACTTCTTATATCTATCACTATCTGGCA
TATCGCCCTAGATATGCCCTGTCAACCTGTAAATATCCCATTGTAATCTA
GTAATCTGCAACAATGTAAAGATTGACGAAACGTTATAAATAAAAGCAAT
CAGCGTTTTTTATACGACATAAAAAAAAAAAAAAAAAAAAAAAAAA

HL02931.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:17:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG7214-RA 1109 CG7214-RA 86..1109 1..1023 5080 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:29:05
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 7742779..7743730 1020..69 4745 99.9 Minus
chr2L 23010047 chr2L 7743846..7743915 70..1 350 100 Minus
chr2L 23010047 chr2L 7740053..7740149 494..398 200 80.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:28:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:29:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7743677..7744632 1023..69 4730 99.9 Minus
2L 23513712 2L 7744748..7744817 70..1 350 100 Minus
2L 23513712 2L 7740955..7741051 494..398 185 79.4 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:47:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7743677..7744632 1023..69 4740 99.8 Minus
2L 23513712 2L 7744748..7744817 70..1 350 100 Minus
2L 23513712 2L 7740955..7741051 494..398 185 79.3 Minus
2L 23513712 2L 7734853..7734900 445..398 180 91.6 Minus
Blast to na_te.dros performed on 2019-03-16 23:29:04 has no hits.

HL02931.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:30:02 Download gff for HL02931.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 7742779..7743555 244..1020 99 == Minus
chr2L 7743615..7743728 71..184 100 <- Minus
chr2L 7743846..7743915 1..70 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:12:06 Download gff for HL02931.complete
Subject Subject Range Query Range Percent Splice Strand
CG7214-RA 1..429 65..493 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:18:39 Download gff for HL02931.complete
Subject Subject Range Query Range Percent Splice Strand
CG7214-RA 1..429 65..493 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:43:56 Download gff for HL02931.complete
Subject Subject Range Query Range Percent Splice Strand
CG7214-RA 1..429 65..493 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:58:04 Download gff for HL02931.complete
Subject Subject Range Query Range Percent Splice Strand
CG7214-RA 1..429 65..493 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:50:57 Download gff for HL02931.complete
Subject Subject Range Query Range Percent Splice Strand
CG7214-RA 1..429 65..493 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:47:36 Download gff for HL02931.complete
Subject Subject Range Query Range Percent Splice Strand
CG7214-RA 25..1045 1..1020 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:18:39 Download gff for HL02931.complete
Subject Subject Range Query Range Percent Splice Strand
CG7214-RA 25..1045 1..1020 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:43:56 Download gff for HL02931.complete
Subject Subject Range Query Range Percent Splice Strand
CG7214-RA 23..1041 1..1018 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:58:04 Download gff for HL02931.complete
Subject Subject Range Query Range Percent Splice Strand
CG7214-RA 25..1045 1..1020 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:50:57 Download gff for HL02931.complete
Subject Subject Range Query Range Percent Splice Strand
CG7214-RA 23..1041 1..1018 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:30:02 Download gff for HL02931.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7743680..7744630 71..1020 99 <- Minus
2L 7744748..7744817 1..70 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:30:02 Download gff for HL02931.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7743680..7744630 71..1020 99 <- Minus
2L 7744748..7744817 1..70 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:30:02 Download gff for HL02931.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7743680..7744630 71..1020 99 <- Minus
2L 7744748..7744817 1..70 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:43:56 Download gff for HL02931.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7743680..7744630 71..1020 99 <- Minus
arm_2L 7744748..7744817 1..70 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:30:39 Download gff for HL02931.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7743680..7744630 71..1020 99 <- Minus
2L 7744748..7744817 1..70 100   Minus

HL02931.hyp Sequence

Translation from 0 to 492

> HL02931.hyp
EYSTSTSPSTTQLQHPPQTNNMKFAVAVVMFVCALAGAHASWAQIAPGVS
YVSPVAHGAGLWNGAWNGAWNGAWNGAWNGAPWGAPAAVAVHASAAPWGL
TGAGWHGAAVPGINLAQGPGLAAGHGHEGVYVAKTRGAIHTAPLAGHINS
ATSVNVAPAPGTL*

HL02931.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 09:57:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG7214-PA 142 CG7214-PA 1..142 22..163 783 100 Plus
Acp1-PA 135 CG7216-PA 1..135 22..163 211 41.3 Plus
CG7203-PC 129 CG7203-PC 1..128 22..162 164 36.7 Plus
CG7203-PB 129 CG7203-PB 1..128 22..162 164 36.7 Plus
CG31904-PB 403 CG31904-PB 221..341 21..148 148 36.9 Plus

HL02931.pep Sequence

Translation from 64 to 492

> HL02931.pep
MKFAVAVVMFVCALAGAHASWAQIAPGVSYVSPVAHGAGLWNGAWNGAWN
GAWNGAWNGAPWGAPAAVAVHASAAPWGLTGAGWHGAAVPGINLAQGPGL
AAGHGHEGVYVAKTRGAIHTAPLAGHINSATSVNVAPAPGTL*

HL02931.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 02:41:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14585-PA 145 GF14585-PA 1..145 1..142 473 81.3 Plus
Dana\GF14586-PA 134 GF14586-PA 98..134 106..142 156 78.4 Plus
Dana\GF14584-PA 138 GF14584-PA 103..138 107..142 138 75 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 02:41:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23511-PA 142 GG23511-PA 1..142 1..142 668 99.3 Plus
Dere\GG23512-PA 133 GG23512-PA 97..133 106..142 148 78.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 02:41:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10481-PA 147 GH10481-PA 1..147 1..142 414 75.7 Plus
Dgri\GH10483-PA 136 GH10483-PA 1..136 1..142 146 37.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:21:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG7214-PA 142 CG7214-PA 1..142 1..142 783 100 Plus
Acp1-PA 135 CG7216-PA 1..135 1..142 211 41.3 Plus
CG7203-PC 129 CG7203-PC 1..128 1..141 164 36.7 Plus
CG7203-PB 129 CG7203-PB 1..128 1..141 164 36.7 Plus
CG31904-PB 403 CG31904-PB 224..341 3..127 147 37.7 Plus
CG31904-PD 403 CG31904-PD 224..341 3..127 147 37.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 02:41:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17999-PA 142 GI17999-PA 1..142 1..142 469 78.6 Plus
Dmoj\GI18000-PA 144 GI18000-PA 1..144 1..142 185 42.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 02:41:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18853-PA 148 GL18853-PA 1..148 1..142 405 77.7 Plus
Dper\GL18854-PA 129 GL18854-PA 1..129 1..142 169 43 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 02:41:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20185-PA 148 GA20185-PA 1..148 1..142 405 77.7 Plus
Dpse\GA25829-PA 136 GA25829-PA 100..136 106..142 156 81.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 02:41:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13372-PA 142 GM13372-PA 1..142 1..142 668 100 Plus
Dsec\GM13384-PA 135 GM13384-PA 99..135 106..142 148 78.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 02:41:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22472-PA 142 GD22472-PA 1..142 1..142 668 100 Plus
Dsim\GD22473-PA 135 GD22473-PA 99..135 106..142 148 78.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 02:41:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19614-PA 142 GJ19614-PA 1..142 1..142 442 82.1 Plus
Dvir\GJ19615-PA 131 GJ19615-PA 44..131 74..142 164 48.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 02:41:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24643-PA 138 GK24643-PA 1..138 1..142 377 65.6 Plus
Dwil\GK24644-PA 137 GK24644-PA 102..137 107..142 142 75 Plus
Dwil\GK24642-PA 146 GK24642-PA 1..146 1..142 142 38.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 02:41:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18338-PA 142 GE18338-PA 1..142 1..142 668 100 Plus
Dyak\GE18339-PA 135 GE18339-PA 99..135 106..142 148 78.4 Plus