BDGP Sequence Production Resources |
Search the DGRC for HL02936
Library: | HL |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 29 |
Well: | 36 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG1847-RA |
Protein status: | HL02936.pep: gold |
Preliminary Size: | 1806 |
Sequenced Size: | 1755 |
Gene | Date | Evidence |
---|---|---|
CG1847 | 2001-01-01 | Release 2 assignment |
CG1847 | 2001-11-09 | Blastp of sequenced clone |
CG1847 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1847 | 2008-04-29 | Release 5.5 accounting |
CG1847 | 2008-08-15 | Release 5.9 accounting |
CG1847 | 2008-12-18 | 5.12 accounting |
1755 bp (1755 high quality bases) assembled on 2001-11-09
GenBank Submission: AY070867
> HL02936.complete GTATCGAAAGGAAATTGTGTTGATTCCAAATAAATCCGATTCCAGCGGAG ATGCAGTCGCGCAGCAAGTCCGATATGAAGCCCATACGAAAGGAGATCCT CAATCCGGGAAACGCCTACATCGAGCTAACCCCGGGCACCAGGGTGAAGT TCCACTTTCAAACGCGGAGGGCCGGCGACAGTCGCATCATCGATGATAGC CGCAAGATGGAGAAGCCCATGGAGCTGGTCCTGGGGAAGAAGTTTAAGCT AGAGGTCTGGGAGCTGATTGTGCAGCAGATGTCCCTTAACGAAGTGGCCA AGTTCACGGTACATAAGTCGCTCTGCGCTCAATATCCTTTTATATCCAAG ACCCTGCGGGACATTGGCAAGAAACCGGAGGAGCGACGTCACTGCTGCGG AATGACATTGCAGAACGAGGGCATTGGGTACACCGACCTGGATGAGCTGC TGCAAAATCCTTCCGATCTGGAGTTCATCATTGAACTGTTCTCCATTGAG CTGCCCGAGCAGTACGAAAAAGAGCGCTGGCAGATGTCCGACGACGAAAA GATGCTGGCCACCAGTACGCTGCGCGAACGGGGCAACAACTTCTATAAGG CCAGTCGGTTCACAGAGGCGGAGACCTGCTACCGCGAGGCTGTCGGAATT GTGGAGCAGCTGATGCTAAAGGAGAAGCCGCACGACGAGGAGTGGCAGGA GCTGGCGGCCATCAAGACACCGCTGTTGTTGAACTACGCGCAATGTCGGT TGATCGCCGGCGACTTCTACGCTGTGATCGAGCACTGCAACGAGGTGCTC ACCCTGGATCCGCGCAATGTCAAGGCACTTTTTCGTCGGGCCAAGGCCCA TGCGGGTGCCTGGAATCCAGCACAGGCACGTCGCGACTTCCTCGACGCCT TGGCCTTGGACGCCAGCCTCAAGTCGACCGTGTCTAAGGAGCTCAAGTCC ATCGAGGATCAGCAGCAGGCACGTAACGTCCAGGATCGCATTCACATGCA GAAGCTCTTCTAGAACATAAGTTGCGTCAACGTGCTGCTCATGCTGCTTG TCTATTGGAGCAGCTACCTGCAGCGCTAGCAGTACTTGTCACTACCTTCT TTTCTTTCGCTGGCCGTCAGCTTCGCTCATGGTCTCGTGCTGCTCTGCTC GATGGCGAACCTATTCCTCTGCTGCTGGACCCTCAAGAAGCTGCTGCGAG CAATGCAGGGGCTCAGCTGGTGATTTTGCGACAACATAACACAATCAACC AACTCGGTACCATACCACCTCATTTTGTGAGAGCTGCATTTTGGGGCACT ATATGCCCATACTCATCCTCCGCCTCGATTCACATTCAACGGTGTAGGCT AAAGGGTCTAAATATAATGTAAATGTACCATCCAGATGCTTGTGTGGAAT TGTAATCGTGTGTATATGGAATGAAAAATGTTGTTTGCGTAGCGTTACCA AAAATAGTAATCAAATGTTTCACATTTGTTGTCCATAGTCGTATATGTAT GTTTGTATTGTATTGTATATCCCTATATGCGATATTTACTCGTAGCTAGA ATCTACTCTAAATCTAGACAAATTGTGTAAGAAGTAATAAATGTGCTTTT GACCGCTGTCTAATTGTTAATTGTAGTTGAAGACTTTATTGTTTGTATAC ATATATGCGGCAAGCATACGTAATAATATGCATTTGCATAAGAGAGAATA CAGTGTATAAAATAAATATCCAAACCTTTAAATGGACAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1847-RA | 1851 | CG1847-RA | 47..1786 | 1..1740 | 8700 | 100 | Plus |
CG1847-RB | 1786 | CG1847-RB | 185..1782 | 143..1740 | 7990 | 100 | Plus |
CG1847.a | 1784 | CG1847.a | 183..1780 | 143..1740 | 7990 | 100 | Plus |
CG1847-RB | 1786 | CG1847-RB | 10..152 | 1..143 | 715 | 100 | Plus |
CG1847.a | 1784 | CG1847.a | 10..152 | 1..143 | 715 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 11760868..11762285 | 320..1737 | 7030 | 99.7 | Plus |
chrX | 22417052 | chrX | 11760610..11760787 | 143..320 | 875 | 99.4 | Plus |
chrX | 22417052 | chrX | 11760326..11760472 | 1..147 | 735 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 688..851 | 1520..1356 | 120 | 59.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 11760326..11760468 | 1..143 | 100 | -> | Plus |
chrX | 11760611..11760787 | 144..320 | 99 | -> | Plus |
chrX | 11760869..11762285 | 321..1737 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1847-RA | 1..963 | 51..1013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1847-RA | 1..963 | 51..1013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1847-RC | 1..1029 | 51..1079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1847-RA | 1..963 | 51..1013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1847-RC | 1..1029 | 51..1079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1847-RA | 10..1746 | 1..1737 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1847-RA | 10..1746 | 1..1737 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1847-RA | 28..1764 | 1..1737 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1847-RA | 10..1746 | 1..1737 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1847-RA | 28..1764 | 1..1737 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11869482..11869658 | 144..320 | 100 | -> | Plus |
X | 11869197..11869339 | 1..143 | 100 | -> | Plus |
X | 11869740..11871156 | 321..1737 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11869482..11869658 | 144..320 | 100 | -> | Plus |
X | 11869197..11869339 | 1..143 | 100 | -> | Plus |
X | 11869740..11871156 | 321..1737 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11869482..11869658 | 144..320 | 100 | -> | Plus |
X | 11869197..11869339 | 1..143 | 100 | -> | Plus |
X | 11869740..11871156 | 321..1737 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 11763230..11763372 | 1..143 | 100 | -> | Plus |
arm_X | 11763515..11763691 | 144..320 | 100 | -> | Plus |
arm_X | 11763773..11765189 | 321..1737 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11877838..11879254 | 321..1737 | 100 | Plus | |
X | 11877580..11877756 | 144..320 | 100 | -> | Plus |
X | 11877295..11877437 | 1..143 | 100 | -> | Plus |
Translation from 50 to 1012
> HL02936.pep MQSRSKSDMKPIRKEILNPGNAYIELTPGTRVKFHFQTRRAGDSRIIDDS RKMEKPMELVLGKKFKLEVWELIVQQMSLNEVAKFTVHKSLCAQYPFISK TLRDIGKKPEERRHCCGMTLQNEGIGYTDLDELLQNPSDLEFIIELFSIE LPEQYEKERWQMSDDEKMLATSTLRERGNNFYKASRFTEAETCYREAVGI VEQLMLKEKPHDEEWQELAAIKTPLLLNYAQCRLIAGDFYAVIEHCNEVL TLDPRNVKALFRRAKAHAGAWNPAQARRDFLDALALDASLKSTVSKELKS IEDQQQARNVQDRIHMQKLF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21573-PA | 318 | GF21573-PA | 4..318 | 6..320 | 1497 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18449-PA | 320 | GG18449-PA | 1..320 | 1..320 | 1696 | 98.1 | Plus |
Dere\GG15394-PA | 383 | GG15394-PA | 94..382 | 58..320 | 161 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11919-PA | 322 | GH11919-PA | 9..322 | 7..320 | 1434 | 83.4 | Plus |
Dgri\GH11297-PA | 441 | GH11297-PA | 148..371 | 27..295 | 160 | 23.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1847-PC | 342 | CG1847-PC | 1..320 | 1..320 | 1658 | 100 | Plus |
CG1847-PA | 320 | CG1847-PA | 1..320 | 1..320 | 1658 | 100 | Plus |
Fkbp59-PB | 439 | CG4535-PB | 239..389 | 158..315 | 174 | 25.9 | Plus |
Fkbp59-PA | 439 | CG4535-PA | 239..389 | 158..315 | 174 | 25.9 | Plus |
CG8336-PD | 383 | CG8336-PD | 148..382 | 98..320 | 153 | 25.1 | Plus |
CG8336-PC | 383 | CG8336-PC | 148..382 | 98..320 | 153 | 25.1 | Plus |
CG8336-PA | 383 | CG8336-PA | 148..382 | 98..320 | 153 | 25.1 | Plus |
CG8336-PB | 383 | CG8336-PB | 148..382 | 98..320 | 153 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14657-PA | 322 | GI14657-PA | 4..322 | 2..320 | 1488 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20154-PA | 320 | GL20154-PA | 1..320 | 1..320 | 1542 | 88.1 | Plus |
Dper\GL12709-PA | 384 | GL12709-PA | 148..383 | 98..320 | 153 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14946-PA | 320 | GA14946-PA | 1..320 | 1..320 | 1543 | 88.4 | Plus |
Dpse\GA20999-PA | 384 | GA20999-PA | 148..383 | 98..320 | 151 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13115-PA | 320 | GM13115-PA | 1..320 | 1..320 | 1706 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17053-PA | 320 | GD17053-PA | 1..320 | 1..320 | 1715 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19310-PA | 322 | GJ19310-PA | 4..322 | 2..320 | 1494 | 85 | Plus |
Dvir\GJ17544-PA | 441 | GJ17544-PA | 133..371 | 12..295 | 163 | 22.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25427-PA | 320 | GK25427-PA | 1..320 | 1..320 | 1484 | 82.8 | Plus |
Translation from 50 to 1012
> HL02936.hyp MQSRSKSDMKPIRKEILNPGNAYIELTPGTRVKFHFQTRRAGDSRIIDDS RKMEKPMELVLGKKFKLEVWELIVQQMSLNEVAKFTVHKSLCAQYPFISK TLRDIGKKPEERRHCCGMTLQNEGIGYTDLDELLQNPSDLEFIIELFSIE LPEQYEKERWQMSDDEKMLATSTLRERGNNFYKASRFTEAETCYREAVGI VEQLMLKEKPHDEEWQELAAIKTPLLLNYAQCRLIAGDFYAVIEHCNEVL TLDPRNVKALFRRAKAHAGAWNPAQARRDFLDALALDASLKSTVSKELKS IEDQQQARNVQDRIHMQKLF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1847-PA | 320 | CG1847-PA | 1..320 | 1..320 | 1658 | 100 | Plus |
CG1847-PC | 342 | CG1847-PC | 1..320 | 1..320 | 1658 | 100 | Plus |
FKBP59-PB | 439 | CG4535-PB | 239..389 | 158..315 | 174 | 25.9 | Plus |
FKBP59-PA | 439 | CG4535-PA | 239..389 | 158..315 | 174 | 25.9 | Plus |
CG8336-PD | 383 | CG8336-PD | 148..382 | 98..320 | 153 | 25.1 | Plus |