HL04357.complete Sequence
1554 bp (1554 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061019
> HL04357.complete
ATTTCATGCATTTACAATTTGTGCGTCATCAAGTTACAACTAAAGCCGAG
AAAGAATTACGATAAATACCGAGATGAACTGCGAAGGACCAAAGTCATTG
CCATTGCCATTGTCATTGCCTTATTGATCTTAGGTCTACTGTACATGCAC
TTCAATCGGCTGGCGCACGTTGGGTGCCCTTGGGAGGAACATGTGGTTAT
AGCGACTATCTAGTGGAGTGTTTGCTTGTGGGCGCCTTTTCTGGTGGCTC
GTCCGCCGTAGAAGATGTCTGTGCTGCTTCGCTTGCTGAATCGGATTCAG
TGTGGATTGAATGCTCCACTCCGTCGTTAAGGGCGGCTGCCAGCTCGCCG
TTGAACTGCAGCAGGCAACCCAGAGCCCCAAAGTATCCCTCGTGCTCCAG
GAAAAGACCCTTCATTGTGCCATTGGACCAGAACTCCATTGCGTACGCCA
GCAGCTTCATGGAAATGGGGTTAACTCGCAGAAAGTTGCCCACAAAGACG
ACCTGAAATGGGTTTGTTGCTCAGTCTACGAGGATATGTATGTAACGAAA
ATTGATACTTACCCTATCGATCTTCTCATTCAGCGCGCACATCCTTGCTA
TGGAGCCGATATTATTCGTTATGGTGACCAGAGTGGCGTTGGCCAGATCT
TCGCGTGATACGGAAACCCGTTTGTCGTTGAGATGCATCTGGCCAAAGCT
AGAAATGGAAAATTCGTAACTGGTACATGGCCCTTCATTTCTGGCTTTGC
TACCTTGACGCCACCAAATCGCCGGGGAGACCAAAGCGGTTGTAATCGCC
ACCATAAATGTCCTTAACTAACTTGTCCACCTTCCTATTGTCACCCTTGG
TGGCCAGTTGGATGGCCTCTTCGAAGGATGTGCAGCCGGTGAGTAGACAA
CACAGGCCGAGGAATGTACCGCCGCCCAAGCTGAACAATACATTTCATTT
AGCATCGTTGCAATAATGTGTAATTTCATGAAGAGCAGTCTTACCTCGTG
CCCGAAATCCGCTTGTAGTTGTCGGGACCGTAGACCGCCAGGATGGAGAC
TCCGGATCCGACGTTCACCAGAATAAACGGAAACGGTTGAGAGAAATTGA
ACTGCTGCTTTTCGCTTTTTCTACAAATTGTATGGTTAGGATCTACAGAC
TCCTTGACGCCAGCGCTTGGTCCACTTACAGAATGTCACGTGCGTTTTCG
TAGTAGTAGCACTCCGTGCGATTATGCAGATCGGCGAAGAGAATGCCTTT
GATGAGCGTGTCCAGCTCGTCGAATTTAGCCAGCTTCATGTTGACTTGGT
CGCGGAAATCCTGCTCGAACTTGAATGCGCCACCGCCGGTGGCACAAACC
GTGGTCACCAGCTCGGCCATGCCCTTCTGCTTGGCAAGCGATAGGAAGTT
GCCCATGTCCGTGGTCTGGAAGCGAATGAAATGCAAGGAGCCGCGTCTTT
TGCGTATCTCGACATTGTCCATCTGAAAAACGATAGGGATTACAAAAACC
GCTTAGGGCGAATAAATATTACCTATTCTAAGAATAAAAAAAAAAAAAAA
AAAA
HL04357.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:06:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33969-RB | 3661 | CG33969-RB | 2127..3661 | 1..1535 | 7675 | 100 | Plus |
CG33969.a | 3628 | CG33969.a | 2094..3628 | 1..1535 | 7675 | 100 | Plus |
fbl.i | 2053 | fbl.i | 1024..1526 | 503..1 | 2515 | 100 | Minus |
fbl.i | 2053 | fbl.i | 290..585 | 1475..1180 | 1480 | 100 | Minus |
fbl.i | 2053 | fbl.i | 710..888 | 932..754 | 895 | 100 | Minus |
fbl.i | 2053 | fbl.i | 887..1026 | 700..561 | 700 | 100 | Minus |
fbl.i | 2053 | fbl.i | 586..711 | 1120..995 | 630 | 100 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 08:47:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 20378910..20380444 | 1535..1 | 7660 | 99.9 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:28:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 08:47:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20389851..20391387 | 1537..1 | 7685 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:30:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 20382951..20384487 | 1537..1 | 7685 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 08:47:52 has no hits.
HL04357.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 08:48:58 Download gff for
HL04357.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 20378910..20380444 | 1..1535 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:11:09 Download gff for
HL04357.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ptx1-RD | 567..593 | 1350..1376 | 92 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:24:29 Download gff for
HL04357.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33969-RB | 1958..3492 | 1..1535 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:42:15 Download gff for
HL04357.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33969-RB | 1958..3492 | 1..1535 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 09:48:58 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 17:07:04 Download gff for
HL04357.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33969-RB | 1958..3492 | 1..1535 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 09:50:56 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:48:58 Download gff for
HL04357.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20389853..20391387 | 1..1535 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:48:58 Download gff for
HL04357.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20389853..20391387 | 1..1535 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:48:58 Download gff for
HL04357.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20389853..20391387 | 1..1535 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:48:58 Download gff for
HL04357.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20382953..20384487 | 1..1535 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:48:58 Download gff for
HL04357.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20382953..20384487 | 1..1535 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:47:27 Download gff for
HL04357.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20382953..20384487 | 1..1535 | 100 | | Minus |
HL04357.pep Sequence
Translation from 310 to 657
> HL04357.pep
MLHSVVKGGCQLAVELQQATQSPKVSLVLQEKTLHCAIGPELHCVRQQLH
GNGVNSQKVAHKDDLKWVCCSVYEDMYVTKIDTYPIDLLIQRAHPCYGAD
IIRYGDQSGVGQIFA*
Sequence HL04357.pep has no blast hits.
HL04357.hyp Sequence
Translation from 310 to 657
> HL04357.hyp
MLHSVVKGGCQLAVELQQATQSPKVSLVLQEKTLHCAIGPELHCVRQQLH
GNGVNSQKVAHKDDLKWVCCSVYEDMYVTKIDTYPIDLLIQRAHPCYGAD
IIRYGDQSGVGQIFA*
Sequence HL04357.hyp has no blast hits.