Clone HL05328 Report

Search the DGRC for HL05328

Clone and Library Details

Library:HL
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1997-11-24
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:53
Well:28
Vector:pBS SK-
Associated Gene/Transcriptlectin-24Db-RA
Protein status:HL05328.pep: gold
Preliminary Size:1402
Sequenced Size:1183

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG2958 2001-01-01 Release 2 assignment
CG2958 2001-10-10 Blastp of sequenced clone
CG2958 2003-01-01 Sim4 clustering to Release 3
lectin-24Db 2008-04-29 Release 5.5 accounting
lectin-24Db 2008-08-15 Release 5.9 accounting
lectin-24Db 2008-12-18 5.12 accounting

Clone Sequence Records

HL05328.complete Sequence

1183 bp (1183 high quality bases) assembled on 2001-10-10

GenBank Submission: AY061025

> HL05328.complete
CTTTCAGTGGTTGTGCGATATCAAAATGTTTAGGCTTGAAAAATGTATTG
TGTACTTACTTGTTGCCTGCAATCTGGTTGAATCACGAGCGGAATCCACA
GAAAATTCCCGATCCGTGTGCCTTCTGAAAGATCCGCCAAATCAGTGCGG
AGAATTCTGCCTTTCGGTGCTCCAACCGCTATTGGATCACATTGTAAAGC
ACCAGGAGCAATGGAACACCTCCGAGGCCCTCTGGCTGAACGAAACCCAG
GGCAAATTGGACAGGATACAGACCCAGCTGGCGGCACAAGCGCTATCCTT
GGAGGAATCAGCGCAGAAGGTTCCAGGAGACATCAAGGATAGACTGGACC
GAATGGAACATCTTCAGACGACACTGCAGGAGTCTCTAAAGAAAATGCCA
GCTGAACTCGATGCGAGGCTAATGAAAATGGAAAATCAGCAAAAGACATT
GGGCGACCAGTTGGAAAATCAAATCAATCTCACCAAGGAATCTCAGCAGG
ATCAGTTGGAAGCCCTAAAGAACGCCATGCCGATAAATTTCGAAATGCGG
CTGGCTCAGATTGAAGAACAGCAGAAGTTACTTCAGGAAACTCTAAAGAA
GATCCCAGAGGATTTTGAACGGAAATTGCAAAAGTTGGAGCAGAATCAGA
AGGATGAGCTGACCAAGCTGGGAGCTCAGCAGTCCGCCAACCAAGTCACA
CTCAAGGAAATTTATACCAAGGTCTTCTGGCCGAAATTTGAGCGAATCGG
CTCTAGACTCTTCTACATAAATCACAAGGATGCCTACGACTGGCAATCCG
CTGTAGACTTCTGTCGTGACATGGGTGGCTATATAGCCGCCATCAAGGAT
CAAGAGGAGCTGGACGCCATTTCAGCGAGACTGGACGACAAGAGCTACTG
GCTGGGCATAAACGACTTGCAAAGCAGTAACACCTACGTATCCGTGGCAT
CCGGCAGGGAAGTTGAATTCCTCAATTGGAATGCGGGCGAACCCAATCAC
GGCAATGAAGATGAGAACTGTGTGGAGCTGATTAGGAGCAAAATGAACGA
TGATCCGTGCCACAGAAAGAAGCATGTTATTTGTCAAACCGACAAAGAAG
TTTAAATGAAAACACTGTCTTTGCATATTCGAAATAAATAAAAGATACAG
ATACTAAAAACTAAAAAAAAAAAAAAAAAAAAA

HL05328.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:06:06
Subject Length Description Subject Range Query Range Score Percent Strand
lectin-24Db-RA 1163 lectin-24Db-RA 1..1163 1..1163 5800 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:24:53
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 4187330..4188491 1..1162 5720 99.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:28:47 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:24:51
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4188123..4189285 1..1163 5800 99.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:30:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4188123..4189285 1..1163 5800 99.9 Plus
Blast to na_te.dros performed on 2019-03-15 19:24:51 has no hits.

HL05328.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:25:39 Download gff for HL05328.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 4187330..4188491 1..1162 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:12:36 Download gff for HL05328.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-24Db-RA 1..1080 26..1105 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:42:09 Download gff for HL05328.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-24Db-RA 1..1080 26..1105 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:50:43 Download gff for HL05328.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-24Db-RA 1..1080 26..1105 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:11:04 Download gff for HL05328.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-24Db-RA 1..1080 26..1105 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:17:37 Download gff for HL05328.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-24Db-RA 1..1080 26..1105 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:24:21 Download gff for HL05328.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-24Db-RA 1..1162 1..1162 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:42:09 Download gff for HL05328.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-24Db-RA 1..1162 1..1162 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:50:43 Download gff for HL05328.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-24Db-RA 1..1162 1..1162 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:11:04 Download gff for HL05328.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-24Db-RA 1..1162 1..1162 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:17:37 Download gff for HL05328.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-24Db-RA 1..1162 1..1162 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:25:39 Download gff for HL05328.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4188123..4189284 1..1162 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:25:39 Download gff for HL05328.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4188123..4189284 1..1162 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:25:39 Download gff for HL05328.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4188123..4189284 1..1162 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:50:43 Download gff for HL05328.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4188123..4189284 1..1162 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:47:20 Download gff for HL05328.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4188123..4189284 1..1162 99   Plus

HL05328.hyp Sequence

Translation from 0 to 1104

> HL05328.hyp
LQWLCDIKMFRLEKCIVYLLVACNLVESRAESTENSRSVCLLKDPPNQCG
EFCLSVLQPLLDHIVKHQEQWNTSEALWLNETQGKLDRIQTQLAAQALSL
EESAQKVPGDIKDRLDRMEHLQTTLQESLKKMPAELDARLMKMENQQKTL
GDQLENQINLTKESQQDQLEALKNAMPINFEMRLAQIEEQQKLLQETLKK
IPEDFERKLQKLEQNQKDELTKLGAQQSANQVTLKEIYTKVFWPKFERIG
SRLFYINHKDAYDWQSAVDFCRDMGGYIAAIKDQEELDAISARLDDKSYW
LGINDLQSSNTYVSVASGREVEFLNWNAGEPNHGNEDENCVELIRSKMND
DPCHRKKHVICQTDKEV*

HL05328.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 09:59:02
Subject Length Description Subject Range Query Range Score Percent Strand
lectin-24Db-PA 359 CG2958-PA 1..359 9..367 1870 100 Plus
CG15818-PA 283 CG15818-PA 1..283 9..367 390 28.6 Plus
lectin-22C-PB 263 CG42295-PB 100..259 207..366 311 41 Plus
CG15358-PC 229 CG15358-PC 47..226 181..366 308 36.9 Plus
CG15358-PB 229 CG15358-PB 47..226 181..366 308 36.9 Plus
CG15358-PC 229 CG15358-PC 3..102 38..138 214 44.6 Plus

HL05328.pep Sequence

Translation from 25 to 1104

> HL05328.pep
MFRLEKCIVYLLVACNLVESRAESTENSRSVCLLKDPPNQCGEFCLSVLQ
PLLDHIVKHQEQWNTSEALWLNETQGKLDRIQTQLAAQALSLEESAQKVP
GDIKDRLDRMEHLQTTLQESLKKMPAELDARLMKMENQQKTLGDQLENQI
NLTKESQQDQLEALKNAMPINFEMRLAQIEEQQKLLQETLKKIPEDFERK
LQKLEQNQKDELTKLGAQQSANQVTLKEIYTKVFWPKFERIGSRLFYINH
KDAYDWQSAVDFCRDMGGYIAAIKDQEELDAISARLDDKSYWLGINDLQS
SNTYVSVASGREVEFLNWNAGEPNHGNEDENCVELIRSKMNDDPCHRKKH
VICQTDKEV*

HL05328.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:43:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15345-PA 204 GF15345-PA 61..200 209..356 285 40.3 Plus
Dana\GF15691-PA 176 GF15691-PA 53..176 238..359 245 37.9 Plus
Dana\GF19731-PA 235 GF19731-PA 60..232 184..354 245 32.4 Plus
Dana\GF14434-PA 168 GF14434-PA 10..164 189..359 238 31.2 Plus
Dana\GF15344-PA 247 GF15344-PA 149..245 263..358 232 46.4 Plus
Dana\GF15344-PA 247 GF15344-PA 54..142 255..342 168 37.1 Plus
Dana\GF19731-PA 235 GF19731-PA 1..109 36..150 154 33.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:43:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24987-PA 449 GG24987-PA 1..449 1..359 1327 59.3 Plus
Dere\GG10476-PA 282 GG10476-PA 1..282 1..359 429 30.2 Plus
Dere\GG24559-PA 1288 GG24559-PA 28..259 32..358 348 31.1 Plus
Dere\GG21745-PA 255 GG21745-PA 70..250 173..356 305 37.3 Plus
Dere\GG10503-PA 276 GG10503-PA 88..272 177..355 302 37.6 Plus
Dere\GG21745-PA 255 GG21745-PA 1..123 1..124 239 45.3 Plus
Dere\GG10503-PA 276 GG10503-PA 1..143 1..137 227 38.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:44:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11271-PA 376 GH11271-PA 1..372 39..355 274 28.5 Plus
Dgri\GH23701-PA 385 GH23701-PA 66..381 39..355 268 29.1 Plus
Dgri\GH15445-PA 407 GH15445-PA 275..403 240..354 202 32.6 Plus
Dgri\GH10464-PA 197 GH10464-PA 56..194 221..355 201 32.9 Plus
Dgri\GH13620-PA 176 GH13620-PA 41..165 238..354 189 35.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:07:33
Subject Length Description Subject Range Query Range Score Percent Strand
lectin-24Db-PA 359 CG2958-PA 1..359 1..359 1870 100 Plus
CG15818-PA 283 CG15818-PA 1..283 1..359 390 28.6 Plus
lectin-22C-PB 263 CG42295-PB 100..259 199..358 311 41 Plus
CG15358-PE 252 CG15358-PE 70..249 173..358 308 36.9 Plus
CG15358-PD 252 CG15358-PD 70..249 173..358 308 36.9 Plus
lectin-24A-PA 282 CG3410-PA 53..279 136..354 297 31.9 Plus
CG2839-PA 826 CG2839-PA 78..266 176..357 274 31.9 Plus
lectin-28C-PC 265 CG7106-PC 81..265 178..359 264 33 Plus
lectin-28C-PB 265 CG7106-PB 81..265 178..359 264 33 Plus
lectin-21Cb-PB 249 CG13686-PB 75..247 186..354 246 32.8 Plus
lectin-37Db-PB 150 CG33533-PB 31..148 241..354 227 42 Plus
lectin-37Db-PA 150 CG33533-PA 31..148 241..354 227 42 Plus
CG15358-PE 252 CG15358-PE 1..125 4..130 222 40.2 Plus
CG15358-PD 252 CG15358-PD 1..125 4..130 222 40.2 Plus
Acp29AB-PA 234 CG17797-PA 64..232 176..357 221 29.5 Plus
CG7763-PD 232 CG7763-PD 81..232 201..359 219 29.2 Plus
CG7763-PC 232 CG7763-PC 81..232 201..359 219 29.2 Plus
lectin-29Ca-PA 236 CG17799-PA 65..234 189..357 218 32.9 Plus
lectin-28C-PC 265 CG7106-PC 1..130 1..128 216 39.1 Plus
lectin-28C-PB 265 CG7106-PB 1..130 1..128 216 39.1 Plus
lectin-21Ca-PA 269 CG2826-PA 69..265 175..354 216 29.8 Plus
lectin-30A-PA 223 CG17011-PA 28..221 164..357 208 25.4 Plus
tfc-PB 376 CG9134-PB 174..372 178..354 204 28.4 Plus
tfc-PC 188 CG9134-PC 56..184 240..354 199 31.8 Plus
tfc-PA 188 CG9134-PA 56..184 240..354 199 31.8 Plus
CG12111-PB 188 CG12111-PB 48..174 238..354 159 27.6 Plus
CG12111-PA 188 CG12111-PA 48..174 238..354 159 27.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:44:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14022-PA 161 GI14022-PA 37..159 241..358 231 36.6 Plus
Dmoj\GI24628-PA 146 GI24628-PA 28..144 240..356 212 29.9 Plus
Dmoj\GI17697-PA 153 GI17697-PA 35..149 240..354 206 32.2 Plus
Dmoj\GI13046-PA 379 GI13046-PA 247..376 240..355 201 32.3 Plus
Dmoj\GI24639-PA 192 GI24639-PA 75..187 240..354 169 27.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:44:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26175-PA 238 GL26175-PA 1..223 135..355 257 29.3 Plus
Dper\GL10741-PA 236 GL10741-PA 111..232 238..355 240 39.8 Plus
Dper\GL26845-PA 183 GL26845-PA 54..179 238..357 239 38.1 Plus
Dper\GL23662-PA 399 GL23662-PA 197..398 175..354 238 31.2 Plus
Dper\GL26705-PA 277 GL26705-PA 110..276 196..354 236 31.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:44:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22633-PA 411 GA22633-PA 89..405 39..344 291 28.7 Plus
Dpse\GA24466-PA 236 GA24466-PA 111..232 238..355 243 38.5 Plus
Dpse\GA29024-PA 277 GA29024-PA 110..276 196..354 237 31.8 Plus
Dpse\GA25561-PA 181 GA25561-PA 42..166 238..355 227 33.6 Plus
Dpse\GA26690-PA 396 GA26690-PA 197..395 175..354 223 31.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:44:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18457-PA 255 GM18457-PA 1..248 110..358 1195 89.6 Plus
Dsec\GM16433-PA 283 GM16433-PA 1..283 1..359 394 28.2 Plus
Dsec\GM18456-PA 74 GM18456-PA 1..74 1..74 349 89.2 Plus
Dsec\GM18119-PA 291 GM18119-PA 79..289 160..356 326 36.5 Plus
Dsec\GM16582-PA 268 GM16582-PA 91..265 160..358 320 36.5 Plus
Dsec\GM16582-PA 268 GM16582-PA 25..135 12..124 217 42.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:44:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12013-PA 358 GD12013-PA 1..358 1..359 1712 89.4 Plus
Dsim\GD23470-PA 283 GD23470-PA 20..283 20..359 388 29.4 Plus
Dsim\GD22727-PA 291 GD22727-PA 69..289 141..356 333 36.1 Plus
Dsim\GD22877-PA 230 GD22877-PA 72..229 199..356 316 41.5 Plus
Dsim\GD11996-PA 252 GD11996-PA 75..249 160..358 307 35.5 Plus
Dsim\GD11996-PA 252 GD11996-PA 1..119 1..124 205 38.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:44:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16447-PA 189 GJ16447-PA 15..189 171..358 238 32.5 Plus
Dvir\GJ16497-PA 252 GJ16497-PA 10..248 39..355 237 23.9 Plus
Dvir\GJ18255-PA 159 GJ18255-PA 36..158 238..355 221 34.1 Plus
Dvir\GJ11333-PA 226 GJ11333-PA 93..224 236..354 202 34.6 Plus
Dvir\GJ12142-PA 412 GJ12142-PA 225..409 195..355 202 29.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:44:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19210-PA 164 GK19210-PA 40..162 237..355 250 39 Plus
Dwil\GK24541-PA 431 GK24541-PA 63..209 196..335 249 36.7 Plus
Dwil\GK19037-PA 249 GK19037-PA 118..243 237..358 240 34.1 Plus
Dwil\GK21163-PA 190 GK21163-PA 58..187 240..355 198 31.5 Plus
Dwil\GK18670-PA 255 GK18670-PA 64..254 175..359 191 31.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:44:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18275-PA 358 GE18275-PA 1..358 1..359 1416 72.7 Plus
Dyak\GE15323-PA 368 GE15323-PA 1..363 1..356 386 31.8 Plus
Dyak\GE14533-PA 282 GE14533-PA 24..282 25..359 379 29.5 Plus
Dyak\GE14642-PA 274 GE14642-PA 90..270 178..356 272 34.3 Plus
Dyak\GE14642-PA 274 GE14642-PA 1..157 1..145 247 38.2 Plus
Dyak\GE14599-PA 302 GE14599-PA 6..297 8..356 247 24.9 Plus