HL05382.complete Sequence
1804 bp (1804 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061026
> HL05382.complete
CCATAATCAAAGTTATCCTTATCTTTCTTTCAAATAACTATCTGCTTCGT
ACAAATTCTGTGAATAATACCCATTATTTGCCGCCGTGTAGCTAAAATGG
CAAGAGCAAACAGGAAATGAACCCGCATGCACTTTTTCAAGTACCTTTCG
TTCGAATTCGCTGGCCGATTGCATCGAGTTGTTCACTCGAGCACCGGAGT
TGGAGCTGCGACTTGAGCTTGAGCTTGGTCTAAAGTAAATTTTGTCGTCG
TCTTGTGTTTCTTAGTTCGCCTTTAAGTTGTGCACATACCCAGCGACTTA
TACGAATGTTCCATGCGGGTATATTCGCACTTGCAGTTGTGAGAACAATG
CTGAATGTGCGAACTATTCAATGCAGTTTCCCACCAATTACATTTAGCCT
TGAATACCAATGGGCAATTGCGTGGGGCTAACACTGTTTCAACTGGGAGC
TTAGGATAATTCGTTCATTCGTCTTACTTATTCAGAAACAGTGTTTAATA
TGCTTTTCGAAATGCAGTAGAGATTCAAATGTATTTTAGATACTTAACCT
TCAAGATTAAAAAATGGTTGTGATGCATATAACTAACCTTTACCATCTCG
AATTATCGAATATCACCTGCCCTTGCTTTAGTTTCTATAGTTTCTATAAT
AACAAAATGTTGAATCTCAAAATCACAATTCTCCGCGCTCAGCAGTTCAA
TTGAAAGGTATCGCCATGGCGAATGTGCACGTCTAGCCTCACCTTTTAGT
TTTATTTCATTGCATTTTGTTTTGTTAATTTCCATGCAATTTCAGGGCAT
TTCATTCCGCTTGCGCGTAGTTGTTGTTCCCGAACCCCAAGTAGATGTTT
TTCGCAATGTTTGCGCAGTTGTGTGGGCATTTGCATTTGTATCTGAGTGC
GACTGTTTGAGTCCGGATTGCAGGGGTGCGGATGTGTGTGGAAGTGTGAG
TCGGCCAACCTGTTCGGAACTCAAGGAAAATGAGTCAGCAACGCCGGGCC
GGGCCGTGCCGGGCCGGGCTTTCGCATCCATGAGATACATTTCGAGTAGA
CGCCGTAAAGTGTTTACCGAGGACATCGAGGTCTGCGGGGTCCTTCTTCC
TTTCTGACCTGCACTCAAGCGTTTATCCGGCGAAGGTTTTGATTATTTTG
TTTCATGTGCCCTTAGCAATGTCTCATATTACTTGCAGGGAATGGGGGCT
TGTTCATATGTATATACCTACATACATATGCATGTATCCCCTGCCATCCG
TATCTTTTCCTCTTCGCTTTGTTCGTCGCCCCTTCGCTTCATTTCCCGGC
TATGCATGGGGCCACTCTAAATGTGTTCAATGTGTAGTTTCCGATAAGCA
TGCATTATGATATACACTTCGAGGCCGAAGTCGTACTGCGTCTTTTTAAT
TGAGCTACAAAATGATCTGACACCAAAGAGCAGGTTACATAAAAAGATAC
ATTTCCAAAACCATCTACCATCCTGTAGGAAGAAACTAATATTTGGAGAT
GCATTAATATTGTTTTTAGTAGGTAGAAATTTTCTTTAACCTGCTCACAT
TTTCCTTGATTTACTCGCGTAAGATGCACGACCTTGACAATCTCTGGCCA
AGAGTCTCGGCACAATTATCGTGTTTGGCTTTAATTCCACACGCTTCGTC
TACAATGTTTACCAAACAGATTTGGAGTGCGCTTAGTACCTTCCTTACCT
TCCCTTACCTACTTTATGCCCAAAAAATCCAAGTGGATTGCAGCAGGTGG
CGTGACTAAGACATTCCGCCATGGCAAAGTGAGTTTAAAAAAAAAAAAAA
AAAA
HL05382.complete Blast Records
Blast to MB8.fasta performed on 2010-07-15 20:06:01 has no hits.
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:25:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 6758190..6759962 | 1785..1 | 8285 | 97.9 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:28:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:25:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10870570..10872369 | 1800..1 | 8985 | 99.9 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:30:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 10871769..10873568 | 1800..1 | 8985 | 99.9 | Minus |
Blast to na_te.dros performed 2019-03-15 17:25:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Stalker4 | 7359 | Stalker4 STALKER4 7359bp | 6862..6905 | 1545..1503 | 118 | 77.3 | Minus |
Stalker | 7256 | Stalker STALKER 7256bp | 6761..6798 | 1539..1503 | 115 | 81.6 | Minus |
HL05382.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:26:31 Download gff for
HL05382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 6758189..6758954 | 1020..1786 | 98 | == | Minus |
chr2R | 6758967..6759962 | 1..992 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:12:38 Download gff for
HL05382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-RA | 1..324 | 784..1107 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:10:55 Download gff for
HL05382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-RA | 1..324 | 784..1107 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:24:09 Download gff for
HL05382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-RA | 1..1786 | 1..1786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:10:55 Download gff for
HL05382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-RA | 1..1786 | 1..1786 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:26:31 Download gff for
HL05382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10870584..10872369 | 1..1786 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:26:31 Download gff for
HL05382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10870584..10872369 | 1..1786 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:26:31 Download gff for
HL05382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10870584..10872369 | 1..1786 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:36:16 Download gff for
HL05382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6758089..6759874 | 1..1786 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:36:16 Download gff for
HL05382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6758089..6759874 | 1..1786 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:36:16 Download gff for
HL05382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6758089..6759874 | 1..1786 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:47:10 Download gff for
HL05382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10871783..10873568 | 1..1786 | 99 | | Minus |
HL05382.pep Sequence
Translation from 783 to 1106
> HL05382.pep
MQFQGISFRLRVVVVPEPQVDVFRNVCAVVWAFAFVSECDCLSPDCRGAD
VCGSVSRPTCSELKENESATPGRAVPGRAFASMRYISSRRRKVFTEDIEV
CGVLLPF*
HL05382.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:44:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG16568-PA | 118 | GG16568-PA | 1..78 | 1..77 | 307 | 87.5 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:44:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM19465-PA | 54 | GM19465-PA | 1..54 | 1..57 | 132 | 53.2 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:44:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD17880-PA | 54 | GD17880-PA | 1..54 | 1..57 | 128 | 51.6 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:44:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE18105-PA | 63 | GE18105-PA | 1..50 | 1..52 | 220 | 90.4 | Plus |
HL05382.hyp Sequence
Translation from 783 to 1106
> HL05382.hyp
MQFQGISFRLRVVVVPEPQVDVFRNVCAVVWAFAFVSECDCLSPDCRGAD
VCGSVSRPTCSELKENESATPGRAVPGRAFASMRYISSRRRKVFTEDIEV
CGVLLPF*
Sequence HL05382.hyp has no blast hits.