HL05735.complete Sequence
1420 bp (1420 high quality bases) assembled on 2002-03-19
GenBank Submission: AY094775
> HL05735.complete
CGGGGCAGGCAGCCACAAAGACTATCTTAACTATCCTATATACTACTACT
ACTACTACTATATTCCGAACTCCTTAACTTTAAACCCTTGTGACACAAAG
CAACAATGGAACAATTAAACACGAGCACTTGTGTGGCGTACGTAATACGA
ATCACACACTTAATATATGTAGACACATGCATATTTTATCAGATAAAGAA
TAATGTAATAACACAATATTAATATAGCCGTTAATCAAACCATATATGTA
TGCTATGTACAGTAGAGGGATATTCTATTTTTTCTATTCATTTATATTCG
TATTTTTTTGTTTTTTCTCAGATTCCAAATTTTGAAAACCAAAAAATATT
CTAATCTAATAGTGTCGAGTCAATTACGTTTACCGCGATTCCCTACAAAA
CATTTTTACGGCTTAGCTAAACTTAACGATTTTAGCGTTTAAACGAAAAC
GATGAACGATAAGTCTCACTATCGATTTATTAGGCACTCAAGAGCGATTA
AGTATCGATCACCTTTACGATGCTGGGCCGAATGCAGCCCTGTGCCCCCG
CCCGACCAATCGCAATCGCGGCTTAGTTCCTGGAAAACCATGGCTCTGGC
TTTCGGATCTCCGCAGTGCGGTTTGGATCTATCGGGAGACATCGGGGGCC
ATCGCCAGCATTCCACCCAACCCGCCCCCTGAGCCACTTCCGGTCACGGA
GGCGCGCTTCCGGCGTGGGTAATCATGTTTTGGATTGCACACACGAGCAA
AAATTAATGTTAACTACACAGCAAACACACCACCTCCCCACACACACACA
CACACACACCAACATTCACATCGTAGACTGTCGCAGCTGGTGTCGAAGTG
TCGCAAATCACGATTTTCGATTCGGGCTTTGCGGGATCTCGGGCATGCTG
CCTTTACGCCCCATAAGACGTGCCACCCATTGGGCAACCGGAATCCAAAA
TCGTAACACCAATCCACACCGACTGCGGCAACTAATGAATTCTTCAGCTG
CGGTCAAAATATCAGGCGATTGTTTATGTCAACAAAAAGGAAATTATATT
GTAACTAACTTTCAAAATTTTTAAAAAGATCTATACGAAACTACAAACCT
TAATGCTCATTTTACTTTGAACATATTTATTGTAGCTTGTATATCTTGTT
TAATTTCTTCATTCATGTTAAAAAGTTTACTTTTTATTTTTTTTTTTTTT
ATTGAAAATTGTAATATTCTTTTAAATACCCGCCCCAATGGCGATCGCAG
CTGGAAATCCATATGCAGTAGAGCAGAATTGAGTAAGGAATATTTAGCAA
TTGACAATCTAGAGATTTTATAGCAAATGAGCCGAGCATGAAGGCCGATG
AAGCGTTTGCTATCCCCCCTAAACCATTCACTATGAACCGAAACTTAAAG
AAAAAAAAAAAAAAAAAAAA
HL05735.complete Blast Records
Blast to MB8.fasta performed on 2010-07-15 19:21:25 has no hits.
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:36:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chrX | 22417052 | chrX | 8917997..8919396 | 1..1400 | 6955 | 99.8 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:28:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:36:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9026216..9027635 | 1..1420 | 7070 | 99.9 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:50:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23527363 | X | 9034314..9035733 | 1..1420 | 7070 | 99.8 | Plus |
Blast to na_te.dros performed 2019-03-16 09:36:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 1524..1651 | 1227..1096 | 172 | 62.1 | Minus |
| 17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 894..1012 | 1224..1107 | 142 | 61.2 | Minus |
| F-element | 4708 | F-element F 4708bp | 4581..4692 | 1227..1107 | 135 | 62.6 | Minus |
| HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 1077..1266 | 306..118 | 118 | 54.9 | Minus |
HL05735.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:37:40 Download gff for
HL05735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chrX | 8917997..8919396 | 1..1400 | 93 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 19:03:16 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:50:54 Download gff for
HL05735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rdgA-RH | 6893..8292 | 1..1400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:03:16 Download gff for
HL05735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31451-RA | 1194..1214 | 716..736 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:14:48 Download gff for
HL05735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rdgA-RH | 6893..8292 | 1..1400 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:37:40 Download gff for
HL05735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9026216..9027615 | 1..1400 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:37:40 Download gff for
HL05735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9026216..9027615 | 1..1400 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:37:40 Download gff for
HL05735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9026216..9027615 | 1..1400 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:50:54 Download gff for
HL05735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8920249..8921648 | 1..1400 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:50:54 Download gff for
HL05735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8920249..8921648 | 1..1400 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:36:45 Download gff for
HL05735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9034314..9035713 | 1..1400 | 100 | | Plus |
HL05735.pep Sequence
Translation from 756 to 1073
> HL05735.pep
MLTTQQTHHLPTHTHTHTNIHIVDCRSWCRSVANHDFRFGLCGISGMLPL
RPIRRATHWATGIQNRNTNPHRLRQLMNSSAAVKISGDCLCQQKGNYIVT
NFQNF*
HL05735.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 19:26:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dere\GG18279-PA | 96 | GG18279-PA | 9..96 | 15..102 | 374 | 80.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 19:26:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\GE15812-PA | 1025 | GE15812-PA | 950..1024 | 18..92 | 370 | 92 | Plus |
HL05735.hyp Sequence
Translation from 756 to 1073
> HL05735.hyp
MLTTQQTHHLPTHTHTHTNIHIVDCRSWCRSVANHDFRFGLCGISGMLPL
RPIRRATHWATGIQNRNTNPHRLRQLMNSSAAVKISGDCLCQQKGNYIVT
NFQNF*
Sequence HL05735.hyp has no blast hits.
