BDGP Sequence Production Resources |
Search the DGRC for HL05936
Library: | HL |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 59 |
Well: | 36 |
Vector: | pBS SK- |
Associated Gene/Transcript | Neos-RA |
Protein status: | HL05936.pep: gold |
Preliminary Size: | 1225 |
Sequenced Size: | 1253 |
Gene | Date | Evidence |
---|---|---|
CG8614 | 2001-01-01 | Release 2 assignment |
CG8614 | 2002-12-11 | Blastp of sequenced clone |
CG8614 | 2003-01-01 | Sim4 clustering to Release 3 |
Neos | 2008-04-29 | Release 5.5 accounting |
Neos | 2008-08-15 | Release 5.9 accounting |
Neos | 2008-12-18 | 5.12 accounting |
1253 bp (1253 high quality bases) assembled on 2002-12-11
GenBank Submission: AF160904
> HL05936.complete TTTCGGGTTTGTGTGCAGTAGAAAGCTTCAAATATCTATGTCTGATCCAG GAAGCGCCGGCTACAACATAACCAAGGATCCGGCCCTGGCAAAGAGTCGA ATCTTCTTGGGCAACCTGCCGGTTTGCACGCGCGAGGAGCTGGTGAGCAT TTGCCAGCCATATGGCAAAGTGCTCGGTTCGATGGTCCAGAAGAACTACG GATTCGTGCAGTTTGAAACGGAGGAGCTGGCCAATAAAGCCGCCTCCGCC CTGCACAAGTCCACTTTTAAGCAAAACATGCTCACCGTACGCAACGCCAG CATTAAATCGAAGGCGGCCAATGCTATCGCCAAAAGAAATTCAAATCAAG GAGGCCAGGTGACAGTTCAGGGTGGACTTGTGATGTCAGCGGCGGCAGCG GCAGCAGGTCAACCCCTCATCAATGATTGCGAGATCATAGTCCAAAATCG CGAGAATACCAAATACGCAGAATACATTGAGGAGCGGCTAAAGAATTCCA GTCTGCGCGTGGATGTACTCTTTCCCAACGAGGACGTCTTGCTAGGCAAG GTCCTGGCCAACATCTCTTCGCGCGGCTGCTTGTATGCGGTATTGGTCAC GCCGCAGCACGAGGAACACAACAGCATCACAGTAAACATTTTGTATGGCG TACCCGCTGAGCATCGCAACATGCCGCTGGAGGACGCCATCACCCTGATC TCCACCGATTTTAGGCTCAAAAAACAGCGCGACGCTGTCGTCTTACCGCC GTCAACATCCATACACAAGGGACAGCGACGACATCCCCAGGAAATGCAGG GGCTGCTGGAAAGGCTGGCAGACAATCATCCATTGACCGCGTCGCAGTAC GAGGTGATTCTTAAGTACCTCGAAGGCGAACGCGAGGAGCAACTGAAGCG AGAGGTGGGCGAGGCCAATGCTCTGGCCAAGCTAAAAGCTCCCGATCCAG AGATCGAGCTGCAGAAGAAGATTCTTAGCATCATGAACAAGCCGGCAGTA ACCGATGTCACCAGCGAGCTCATGTATCCCACTTTCGAGGCAGTCAAGGA GGACAGAAGGCTAATGGAGCTACTTGCTGACGATCGAGTGTTGGCGGCCC TGGAAAGTGTTTACAACTCGGATCTCAGACAGATTTTAGCCGAGTATTTA TAGACTACCAATACTTAGTAGTATTCATTAATTTTAGCCATTAAGCATAT TTAACATTTAATAAATGTAATACCTAATAAAAAAAAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\HeT-A | 5691 | Dyak\HeT-A YAKHETA 5691bp | 1768..1832 | 279..344 | 111 | 65.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 7234519..7235287 | 460..1228 | 100 | Plus | |
chr3L | 7233997..7234455 | 1..459 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Neos-RA | 1..1116 | 38..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Neos-RA | 1..1116 | 38..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Neos-RA | 1..1116 | 38..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Neos-RA | 1..1116 | 38..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Neos-RA | 1..1116 | 38..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Neos-RA | 147..1374 | 1..1228 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Neos-RA | 147..1374 | 1..1228 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Neos-RA | 211..1438 | 1..1228 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Neos-RA | 147..1374 | 1..1228 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Neos-RA | 211..1438 | 1..1228 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7241838..7242296 | 1..459 | 100 | -> | Plus |
3L | 7242360..7243128 | 460..1228 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7241838..7242296 | 1..459 | 100 | -> | Plus |
3L | 7242360..7243128 | 460..1228 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7241838..7242296 | 1..459 | 100 | -> | Plus |
3L | 7242360..7243128 | 460..1228 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 7234938..7235396 | 1..459 | 100 | -> | Plus |
arm_3L | 7235460..7236228 | 460..1228 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7234938..7235396 | 1..459 | 100 | -> | Plus |
3L | 7235460..7236228 | 460..1228 | 100 | Plus |
Translation from 0 to 1152
> HL05936.hyp FGFVCSRKLQISMSDPGSAGYNITKDPALAKSRIFLGNLPVCTREELVSI CQPYGKVLGSMVQKNYGFVQFETEELANKAASALHKSTFKQNMLTVRNAS IKSKAANAIAKRNSNQGGQVTVQGGLVMSAAAAAAGQPLINDCEIIVQNR ENTKYAEYIEERLKNSSLRVDVLFPNEDVLLGKVLANISSRGCLYAVLVT PQHEEHNSITVNILYGVPAEHRNMPLEDAITLISTDFRLKKQRDAVVLPP STSIHKGQRRHPQEMQGLLERLADNHPLTASQYEVILKYLEGEREEQLKR EVGEANALAKLKAPDPEIELQKKILSIMNKPAVTDVTSELMYPTFEAVKE DRRLMELLADDRVLAALESVYNSDLRQILAEYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Neos-PB | 371 | CG8614-PB | 1..371 | 13..383 | 1862 | 100 | Plus |
Neos-PA | 371 | CG8614-PA | 1..371 | 13..383 | 1862 | 100 | Plus |
fz3-PB | 646 | CG16785-PB | 1..95 | 13..107 | 230 | 49.5 | Plus |
CG14628-PA | 141 | CG14628-PA | 1..97 | 13..109 | 217 | 45.4 | Plus |
CG18823-PA | 106 | CG18823-PA | 9..82 | 27..100 | 188 | 48.6 | Plus |
Translation from 37 to 1152
> HL05936.pep MSDPGSAGYNITKDPALAKSRIFLGNLPVCTREELVSICQPYGKVLGSMV QKNYGFVQFETEELANKAASALHKSTFKQNMLTVRNASIKSKAANAIAKR NSNQGGQVTVQGGLVMSAAAAAAGQPLINDCEIIVQNRENTKYAEYIEER LKNSSLRVDVLFPNEDVLLGKVLANISSRGCLYAVLVTPQHEEHNSITVN ILYGVPAEHRNMPLEDAITLISTDFRLKKQRDAVVLPPSTSIHKGQRRHP QEMQGLLERLADNHPLTASQYEVILKYLEGEREEQLKREVGEANALAKLK APDPEIELQKKILSIMNKPAVTDVTSELMYPTFEAVKEDRRLMELLADDR VLAALESVYNSDLRQILAEYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23867-PA | 366 | GF23867-PA | 4..366 | 6..371 | 1373 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14412-PA | 371 | GG14412-PA | 1..371 | 1..371 | 1840 | 92.5 | Plus |
Dere\GG12822-PA | 204 | GG12822-PA | 1..98 | 1..97 | 234 | 46.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15151-PA | 375 | GH15151-PA | 4..375 | 1..371 | 1277 | 66.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Neos-PB | 371 | CG8614-PB | 1..371 | 1..371 | 1862 | 100 | Plus |
Neos-PA | 371 | CG8614-PA | 1..371 | 1..371 | 1862 | 100 | Plus |
fz3-PB | 646 | CG16785-PB | 1..95 | 1..95 | 230 | 49.5 | Plus |
CG14628-PA | 141 | CG14628-PA | 1..97 | 1..97 | 217 | 45.4 | Plus |
CG18823-PA | 106 | CG18823-PA | 9..82 | 15..88 | 188 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12088-PA | 378 | GI12088-PA | 6..378 | 3..371 | 1292 | 66.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24901-PA | 374 | GL24901-PA | 7..374 | 9..371 | 1291 | 70.7 | Plus |
Dper\GL18012-PA | 144 | GL18012-PA | 8..87 | 134..228 | 192 | 45.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21209-PA | 374 | GA21209-PA | 7..374 | 9..371 | 1292 | 70.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14827-PA | 370 | GM14827-PA | 1..370 | 1..371 | 1909 | 97 | Plus |
Dsec\GM18998-PA | 141 | GM18998-PA | 1..98 | 1..98 | 219 | 42.9 | Plus |
Dsec\GM19114-PA | 141 | GM19114-PA | 1..98 | 1..98 | 219 | 42.9 | Plus |
Dsec\GM19098-PA | 186 | GM19098-PA | 1..95 | 1..95 | 218 | 47.4 | Plus |
Dsec\GM19104-PA | 117 | GM19104-PA | 7..91 | 7..91 | 207 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14001-PA | 347 | GD14001-PA | 1..347 | 1..371 | 1740 | 90.8 | Plus |
Dsim\GD16527-PA | 162 | GD16527-PA | 1..96 | 1..96 | 215 | 45.8 | Plus |
Dsim\GD16533-PA | 183 | GD16533-PA | 1..91 | 1..91 | 213 | 48.4 | Plus |
Dsim\GD16464-PA | 184 | GD16464-PA | 1..103 | 1..101 | 212 | 44.7 | Plus |
Dsim\GD16538-PA | 121 | GD16538-PA | 7..91 | 7..91 | 206 | 45.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13359-PA | 375 | GJ13359-PA | 6..375 | 3..371 | 1397 | 70.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13148-PA | 371 | GK13148-PA | 6..371 | 3..371 | 1339 | 68.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21602-PA | 371 | GE21602-PA | 1..371 | 1..371 | 1853 | 93 | Plus |
Dyak\GE16652-PA | 105 | GE16652-PA | 7..97 | 7..97 | 199 | 41.8 | Plus |
Dyak\GE16653-PA | 111 | GE16653-PA | 7..97 | 7..97 | 196 | 41.8 | Plus |