BDGP Sequence Production Resources |
Search the DGRC for HL07758
Library: | HL |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 77 |
Well: | 58 |
Vector: | pBS SK- |
Associated Gene/Transcript | Vha44-RA |
Protein status: | HL07758.pep: gold |
Preliminary Size: | 1554 |
Sequenced Size: | 1428 |
Gene | Date | Evidence |
---|---|---|
CG8048 | 2001-01-01 | Release 2 assignment |
CG8048 | 2001-10-10 | Blastp of sequenced clone |
CG8048 | 2003-01-01 | Sim4 clustering to Release 3 |
Vha44 | 2008-04-29 | Release 5.5 accounting |
Vha44 | 2008-08-15 | Release 5.9 accounting |
Vha44 | 2008-12-18 | 5.12 accounting |
1428 bp (1428 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061038
> HL07758.complete CGACATAGAAGCACGTCAGCATGTGGCACAACCGGAGAAAGTAGGAAAAA CAAACGGAGTAGAGGAAAAGCCCAACAAAAAAAAAAAACGAACGACGGCC AGGGAAAAATGCCAAAAAACCTGGTGGGAAAGTTCCTAACCATTCTGTTG AGACGCAAGGAGTGCTAGGATCAAGTGTTTGTCCATCAAGATGATGTCGG AATACTGGATTATCTCGGCCCCTGGCGACAAGACCTGCCAGCAGACGTAC GACACGATGAACAATCTGACCAGCAAGCAACACAACCTGTGCAATAACTA CAAGTTCCATATTCCAGATCTTAAGGTGGGCACCCTCGACCAACTGGTGG GCCTCTCCGACGATCTGGGCAAACTGGACACCTATGTGGAGCAGATCACC CGCAAGGTGGCCAACTATCTGGGCGAGGTGCTCGAGGATCAGCGGGACAA GCTGCACGAGAACCTGATGGCCAACAACACCGAACTACCCCAGTACTTGA CCCGCTTCCAATGGGACATGGCCAAGTATCCGATCAAGCAGTCGCTGCGC AACATCGCCGACATTATCTCCAAGCAGATCGGTCAGATCGATGGCGATTT GAAGACCAAGTCGCAGGCCTATAACAACCTCAAGGGAAATCTGCAGAATC TGGAAAAGAAGAAGACTGGCAGTCTGCTGACCAGGAATCTGGCTGATTTG GTCAAGAAGGAGCACTTCATCCTGGACTCGGAGTACCTGACCACCCTGCT GGTCATTGTACCCAAGGTCATGGCTAATGACTGGCTGACCAACTACGAGA AGATCACCGACATGATCGTGCCCCGCTCGTCGCAGCTCATCCAGGAGGAC GCCGACTACTGCCTGTTCAACGTGACGCTCTTCAAGAAGGTTGCCGAGGA GTTTAAGCTGCATGCCCGCGAGCGCAAGTTCATTGTGCGCGACTTTGTGT ACAACGAGGAGGAGCTGGCTGCCGGCAAGAACGAGATGACCAAGCTGATG ACGGACAAGAAGAAGCAGTTTGGTCCTTTGGTTCGTTGGCTGAAGGTGAA CTTCAGCGAGGCCTTCTGCGCCCTCATCCACGTCAAGGCGCTGCGCGTGT TTGTGGAATCCGTGCTGAGATACGGACTGCCTGTTAACTTCCAGGCCATC TTGATCGAGCCCAACAAGAAGAGCGTGAAGCGTCTGCGCGATGTGCTCAA CCAGCTGTATGGTCACTTGGATGGCGCCTCCGCCGGCGGTGCTGTCAGCA GTGCTGATAACGTAGACATCCCCGGCCTGGGCTTTGGCCAGTCCGAATAC TTCCCCTATGTGTTCTACAAGGTCAACATCGATATGGTGGAGCAGGCCAA GGTCTAAGATCGCCCGTCGCCCCCAACATTGCATACATCCAGCCACACAA AATACACTTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Vha44-RB | 2616 | Vha44-RB | 47..1474 | 1..1428 | 7095 | 99.7 | Plus |
Vha44-RE | 3871 | Vha44-RE | 1841..2789 | 480..1428 | 4700 | 99.6 | Plus |
Vha44-RC | 2778 | Vha44-RC | 688..1636 | 480..1428 | 4700 | 99.6 | Plus |
Vha44-RE | 3871 | Vha44-RE | 18..496 | 1..479 | 2395 | 100 | Plus |
Vha44-RC | 2778 | Vha44-RC | 47..525 | 1..479 | 2395 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 12213810..12214066 | 1022..766 | 1285 | 100 | Minus |
chr2R | 21145070 | chr2R | 12214292..12214478 | 666..480 | 920 | 99.5 | Minus |
chr2R | 21145070 | chr2R | 12221084..12221265 | 182..1 | 880 | 98.9 | Minus |
chr2R | 21145070 | chr2R | 12220340..12220496 | 479..323 | 755 | 98.7 | Minus |
chr2R | 21145070 | chr2R | 12213231..12213382 | 1410..1259 | 745 | 99.3 | Minus |
chr2R | 21145070 | chr2R | 12220582..12220726 | 327..183 | 725 | 100 | Minus |
chr2R | 21145070 | chr2R | 12213453..12213593 | 1258..1118 | 705 | 100 | Minus |
chr2R | 21145070 | chr2R | 12214128..12214227 | 766..667 | 500 | 100 | Minus |
chr2R | 21145070 | chr2R | 12213651..12213748 | 1119..1022 | 490 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 16326492..16326748 | 1022..766 | 1285 | 100 | Minus |
2R | 25286936 | 2R | 16326974..16327160 | 666..480 | 935 | 100 | Minus |
2R | 25286936 | 2R | 16333780..16333961 | 182..1 | 910 | 100 | Minus |
2R | 25286936 | 2R | 16325895..16326064 | 1428..1259 | 805 | 98.2 | Minus |
2R | 25286936 | 2R | 16333034..16333190 | 479..323 | 785 | 100 | Minus |
2R | 25286936 | 2R | 16333276..16333420 | 327..183 | 725 | 100 | Minus |
2R | 25286936 | 2R | 16326135..16326275 | 1258..1118 | 705 | 100 | Minus |
2R | 25286936 | 2R | 16326810..16326909 | 766..667 | 500 | 100 | Minus |
2R | 25286936 | 2R | 16326333..16326430 | 1119..1022 | 490 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 16327691..16327947 | 1022..766 | 1285 | 100 | Minus |
2R | 25260384 | 2R | 16328173..16328359 | 666..480 | 935 | 100 | Minus |
2R | 25260384 | 2R | 16334979..16335160 | 182..1 | 910 | 100 | Minus |
2R | 25260384 | 2R | 16327094..16327263 | 1428..1259 | 805 | 98.2 | Minus |
2R | 25260384 | 2R | 16334233..16334389 | 479..323 | 785 | 100 | Minus |
2R | 25260384 | 2R | 16334475..16334619 | 327..183 | 725 | 100 | Minus |
2R | 25260384 | 2R | 16327334..16327474 | 1258..1118 | 705 | 100 | Minus |
2R | 25260384 | 2R | 16328009..16328108 | 766..667 | 500 | 100 | Minus |
2R | 25260384 | 2R | 16327532..16327629 | 1119..1022 | 490 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12221084..12221265 | 1..182 | 98 | Minus | |
chr2R | 12213231..12213382 | 1259..1410 | 99 | <- | Minus |
chr2R | 12213453..12213591 | 1120..1258 | 100 | <- | Minus |
chr2R | 12213651..12213748 | 1022..1119 | 100 | <- | Minus |
chr2R | 12213811..12214066 | 766..1021 | 100 | <- | Minus |
chr2R | 12214129..12214227 | 667..765 | 100 | <- | Minus |
chr2R | 12214292..12214478 | 480..666 | 99 | <- | Minus |
chr2R | 12220340..12220493 | 326..479 | 98 | <- | Minus |
chr2R | 12220584..12220726 | 183..325 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha44-RB | 1..1167 | 191..1357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha44-RB | 1..1167 | 191..1357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha44-RA | 1..1167 | 191..1357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha44-RB | 1..1167 | 191..1357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha44-RA | 1..1167 | 191..1357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha44-RB | 18..1427 | 1..1410 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha44-RB | 18..1427 | 1..1410 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha44-RB | 22..1431 | 1..1410 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha44-RB | 18..1427 | 1..1410 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha44-RB | 22..1431 | 1..1410 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16326135..16326273 | 1120..1258 | 100 | <- | Minus |
2R | 16326333..16326430 | 1022..1119 | 100 | <- | Minus |
2R | 16325913..16326064 | 1259..1410 | 100 | <- | Minus |
2R | 16326493..16326748 | 766..1021 | 100 | <- | Minus |
2R | 16326811..16326909 | 667..765 | 100 | <- | Minus |
2R | 16326974..16327160 | 480..666 | 100 | <- | Minus |
2R | 16333034..16333187 | 326..479 | 100 | <- | Minus |
2R | 16333278..16333420 | 183..325 | 100 | <- | Minus |
2R | 16333780..16333961 | 1..182 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16326135..16326273 | 1120..1258 | 100 | <- | Minus |
2R | 16326333..16326430 | 1022..1119 | 100 | <- | Minus |
2R | 16325913..16326064 | 1259..1410 | 100 | <- | Minus |
2R | 16326493..16326748 | 766..1021 | 100 | <- | Minus |
2R | 16326811..16326909 | 667..765 | 100 | <- | Minus |
2R | 16326974..16327160 | 480..666 | 100 | <- | Minus |
2R | 16333034..16333187 | 326..479 | 100 | <- | Minus |
2R | 16333278..16333420 | 183..325 | 100 | <- | Minus |
2R | 16333780..16333961 | 1..182 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16326135..16326273 | 1120..1258 | 100 | <- | Minus |
2R | 16326333..16326430 | 1022..1119 | 100 | <- | Minus |
2R | 16325913..16326064 | 1259..1410 | 100 | <- | Minus |
2R | 16326493..16326748 | 766..1021 | 100 | <- | Minus |
2R | 16326811..16326909 | 667..765 | 100 | <- | Minus |
2R | 16326974..16327160 | 480..666 | 100 | <- | Minus |
2R | 16333034..16333187 | 326..479 | 100 | <- | Minus |
2R | 16333278..16333420 | 183..325 | 100 | <- | Minus |
2R | 16333780..16333961 | 1..182 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12220539..12220692 | 326..479 | 100 | <- | Minus |
arm_2R | 12220783..12220925 | 183..325 | 100 | <- | Minus |
arm_2R | 12221285..12221466 | 1..182 | 100 | Minus | |
arm_2R | 12213418..12213569 | 1259..1410 | 100 | <- | Minus |
arm_2R | 12213640..12213778 | 1120..1258 | 100 | <- | Minus |
arm_2R | 12213838..12213935 | 1022..1119 | 100 | <- | Minus |
arm_2R | 12213998..12214253 | 766..1021 | 100 | <- | Minus |
arm_2R | 12214316..12214414 | 667..765 | 100 | <- | Minus |
arm_2R | 12214479..12214665 | 480..666 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16334233..16334386 | 326..479 | 100 | <- | Minus |
2R | 16327692..16327947 | 766..1021 | 100 | <- | Minus |
2R | 16328010..16328108 | 667..765 | 100 | <- | Minus |
2R | 16328173..16328359 | 480..666 | 100 | <- | Minus |
2R | 16334477..16334619 | 183..325 | 100 | <- | Minus |
2R | 16334979..16335160 | 1..182 | 100 | Minus | |
2R | 16327112..16327263 | 1259..1410 | 100 | <- | Minus |
2R | 16327334..16327472 | 1120..1258 | 100 | <- | Minus |
2R | 16327532..16327629 | 1022..1119 | 100 | <- | Minus |
Translation from 190 to 1356
> HL07758.hyp MMSEYWIISAPGDKTCQQTYDTMNNLTSKQHNLCNNYKFHIPDLKVGTLD QLVGLSDDLGKLDTYVEQITRKVANYLGEVLEDQRDKLHENLMANNTELP QYLTRFQWDMAKYPIKQSLRNIADIISKQIGQIDGDLKTKSQAYNNLKGN LQNLEKKKTGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKVMANDWLT NYEKITDMIVPRSSQLIQEDADYCLFNVTLFKKVAEEFKLHARERKFIVR DFVYNEEELAAGKNEMTKLMTDKKKQFGPLVRWLKVNFSEAFCALIHVKA LRVFVESVLRYGLPVNFQAILIEPNKKSVKRLRDVLNQLYGHLDGASAGG AVSSADNVDIPGLGFGQSEYFPYVFYKVNIDMVEQAKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Vha44-PB | 388 | CG8048-PB | 1..388 | 1..388 | 2008 | 100 | Plus |
Vha44-PA | 388 | CG8048-PA | 1..388 | 1..388 | 2008 | 100 | Plus |
Vha44-PC | 442 | CG8048-PC | 1..442 | 1..388 | 1895 | 86.2 | Plus |
Vha44-PF | 836 | CG8048-PF | 546..836 | 98..388 | 1490 | 100 | Plus |
Vha44-PE | 836 | CG8048-PE | 546..836 | 98..388 | 1490 | 100 | Plus |
Vha44-PF | 836 | CG8048-PF | 1..100 | 1..100 | 516 | 97 | Plus |
Translation from 190 to 1356
> HL07758.pep MMSEYWIISAPGDKTCQQTYDTMNNLTSKQHNLCNNYKFHIPDLKVGTLD QLVGLSDDLGKLDTYVEQITRKVANYLGEVLEDQRDKLHENLMANNTELP QYLTRFQWDMAKYPIKQSLRNIADIISKQIGQIDGDLKTKSQAYNNLKGN LQNLEKKKTGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKVMANDWLT NYEKITDMIVPRSSQLIQEDADYCLFNVTLFKKVAEEFKLHARERKFIVR DFVYNEEELAAGKNEMTKLMTDKKKQFGPLVRWLKVNFSEAFCALIHVKA LRVFVESVLRYGLPVNFQAILIEPNKKSVKRLRDVLNQLYGHLDGASAGG AVSSADNVDIPGLGFGQSEYFPYVFYKVNIDMVEQAKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11269-PA | 388 | GF11269-PA | 1..388 | 1..388 | 2039 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22273-PA | 441 | GG22273-PA | 1..441 | 1..388 | 2004 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21923-PA | 792 | GH21923-PA | 501..792 | 98..388 | 1495 | 95.9 | Plus |
Dgri\GH21923-PA | 792 | GH21923-PA | 1..100 | 1..100 | 504 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Vha44-PB | 388 | CG8048-PB | 1..388 | 1..388 | 2008 | 100 | Plus |
Vha44-PA | 388 | CG8048-PA | 1..388 | 1..388 | 2008 | 100 | Plus |
Vha44-PC | 442 | CG8048-PC | 1..442 | 1..388 | 1895 | 86.2 | Plus |
Vha44-PF | 836 | CG8048-PF | 546..836 | 98..388 | 1490 | 100 | Plus |
Vha44-PE | 836 | CG8048-PE | 546..836 | 98..388 | 1490 | 100 | Plus |
Vha44-PF | 836 | CG8048-PF | 1..100 | 1..100 | 516 | 97 | Plus |
Vha44-PE | 836 | CG8048-PE | 1..100 | 1..100 | 516 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19629-PA | 664 | GI19629-PA | 374..664 | 98..388 | 1506 | 96.2 | Plus |
Dmoj\GI19629-PA | 664 | GI19629-PA | 1..96 | 2..97 | 513 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11349-PA | 388 | GL11349-PA | 1..388 | 1..388 | 2003 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20788-PA | 448 | GA20788-PA | 157..448 | 97..388 | 1505 | 96.2 | Plus |
Dpse\GA20788-PA | 448 | GA20788-PA | 1..96 | 1..96 | 496 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20063-PA | 388 | GM20063-PA | 1..388 | 1..388 | 2075 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25545-PA | 388 | GD25545-PA | 1..388 | 1..388 | 2075 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14996-PA | 704 | GJ14996-PA | 410..704 | 94..388 | 1524 | 95.9 | Plus |
Dvir\GJ14996-PA | 704 | GJ14996-PA | 1..100 | 1..100 | 513 | 93 | Plus |