BDGP Sequence Production Resources |
Search the DGRC for HL07789
Library: | HL |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 77 |
Well: | 89 |
Vector: | pBS SK- |
Associated Gene/Transcript | Obp19d-RA |
Protein status: | HL07789.pep: gold |
Preliminary Size: | 1297 |
Sequenced Size: | 1138 |
Gene | Date | Evidence |
---|---|---|
CG1668 | 2001-01-01 | Release 2 assignment |
CG1670 | 2001-01-01 | Release 2 assignment |
CG11734 | 2001-01-01 | Release 2 assignment |
CG11738 | 2001-01-01 | Release 2 assignment |
CG11748 | 2001-01-01 | Release 2 assignment |
CG1668 | 2002-05-17 | Blastp of sequenced clone |
CG1668 | 2003-01-01 | Sim4 clustering to Release 3 |
Pbprp2 | 2008-04-29 | Release 5.5 accounting |
Pbprp2 | 2008-08-15 | Release 5.9 accounting |
Pbprp2 | 2008-12-18 | 5.12 accounting |
1138 bp (1138 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118484
> HL07789.complete TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTG ATCGATTTAATTACAAGCGGGATTTCTCATCTCTCATTTTGCATTTAGCA TTTTGCATTTTCATTTCCATTTCCACTAGCCATAGCCATTCCCAATTCTA TATCCCCGGCATTTGCAGCGATTTCATGCCAGTCACCAATTAAGCAGGTA AGTGGAGATCGGTGGGCCATCTCATCTGGCAGCGGCAGTTCCAGCGGGGT GTCACTCGTTCACACGATGCCCAGTCGAGGGCATCTCCGCCGGATTCCGT CCCATCCCGTCCAGAGCGGCGGAGTGAAGTGGAGTGCCATGTGCCATGTG CTGCCCATGTAGTTCATAATTGCGCGTAATTGCCGGAGCTGCTTGAGACG CAGCTGGAGATCGGCGATGGATCCGATCTGCCAAATCAATCACGGGACTC GGCTTAGGCAATAGCTCCTATAAAACGCCGACGTTGCCGGCGATTCGCAT CCAAGTCAGAGTTCGCACGTCGCGCAGTTCAATCGCAAATCGAAATGTCG CATCTGGTTCACCTGACCGTCCTGCTCCTAGTGGGCATCCTCTGCCTGGG CGCCACCAGCGCCAAGCCGCACGAGGAGATCAACAGGGACCACGCCGCCG AGCTGGCCAACGAGTGCAAGGCTGAGACGGGAGCCACCGATGAGGATGTG GAGCAGCTGATGAGCCACGACCTGCCCGAGAGACACGAGGCCAAGTGCCT GCGCGCCTGCGTGATGAAAAAGCTGCAGATAATGGATGAATCCGGTAAGC TGAACAAGGAACACGCCATCGAGTTGGTCAAGGTCATGAGCAAGCACGAT GCAGAGAAGGAAGACGCTCCCGCCGAGGTGGTGGCCAAGTGCGAGGCCAT CGAGACACCCGAGGATCATTGCGACGCTGCCTTCGCCTACGAGGAATGCA TTTACGAGCAAATGAAGGAGCATGGACTCGAGCTGGAGGAGCACTGAGAA CAGATTTGAGACCCATGACGACCCCCCGTTACTGTATCACAAGCGCCCTT CTGGAATATAACCATCTTTTTTTTTTATGTGTATACTATGAATTAAGTAC TTGATAAACTGAGAAACTGCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 20285151..20285796 | 47..692 | 3200 | 99.7 | Plus |
chrX | 22417052 | chrX | 20286289..20286490 | 919..1120 | 1010 | 100 | Plus |
chrX | 22417052 | chrX | 20286088..20286224 | 782..918 | 685 | 100 | Plus |
chrX | 22417052 | chrX | 20285926..20286015 | 692..781 | 450 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 20419640..20420285 | 47..692 | 3230 | 100 | Plus |
X | 23542271 | X | 20420778..20420980 | 919..1121 | 1015 | 100 | Plus |
X | 23542271 | X | 20420577..20420713 | 782..918 | 685 | 100 | Plus |
X | 23542271 | X | 20420415..20420504 | 692..781 | 450 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 20404732..20405377 | 47..692 | 3230 | 100 | Plus |
X | 23527363 | X | 20405870..20406072 | 919..1121 | 1015 | 100 | Plus |
X | 23527363 | X | 20405669..20405805 | 782..918 | 685 | 100 | Plus |
X | 23527363 | X | 20405507..20405596 | 692..781 | 450 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20286289..20286490 | 919..1120 | 100 | Plus | |
chrX | 20251377..20251403 | 1..25 | 92 | -> | Plus |
chrX | 20285124..20285796 | 26..692 | 97 | -> | Plus |
chrX | 20285927..20286015 | 693..781 | 100 | -> | Plus |
chrX | 20286088..20286224 | 782..918 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pbprp2-RB | 1..453 | 545..997 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pbprp2-RB | 1..453 | 545..997 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp19d-RA | 1..453 | 545..997 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pbprp2-RB | 1..453 | 545..997 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp19d-RA | 1..453 | 545..997 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pbprp2-RA | 26..1101 | 44..1120 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pbprp2-RA | 26..1101 | 44..1120 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp19d-RA | 26..1101 | 44..1120 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pbprp2-RA | 26..1101 | 44..1120 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp19d-RA | 26..1101 | 44..1120 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20420577..20420713 | 782..918 | 100 | -> | Plus |
X | 20420778..20420979 | 919..1120 | 100 | Plus | |
X | 20385927..20385953 | 1..25 | 92 | -> | Plus |
X | 20419613..20420285 | 26..692 | 98 | -> | Plus |
X | 20420416..20420504 | 693..781 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20420577..20420713 | 782..918 | 100 | -> | Plus |
X | 20420778..20420979 | 919..1120 | 100 | Plus | |
X | 20385927..20385953 | 1..25 | 92 | -> | Plus |
X | 20419613..20420285 | 26..692 | 98 | -> | Plus |
X | 20420416..20420504 | 693..781 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20420577..20420713 | 782..918 | 100 | -> | Plus |
X | 20420778..20420979 | 919..1120 | 100 | Plus | |
X | 20385927..20385953 | 1..25 | 92 | -> | Plus |
X | 20419613..20420285 | 26..692 | 98 | -> | Plus |
X | 20420416..20420504 | 693..781 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20256954..20256980 | 1..25 | 92 | -> | Plus |
arm_X | 20290640..20291312 | 26..692 | 98 | -> | Plus |
arm_X | 20291443..20291531 | 693..781 | 100 | -> | Plus |
arm_X | 20291604..20291740 | 782..918 | 100 | -> | Plus |
arm_X | 20291805..20292006 | 919..1120 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20404705..20405377 | 26..692 | 98 | -> | Plus |
X | 20405508..20405596 | 693..781 | 100 | -> | Plus |
X | 20405669..20405805 | 782..918 | 100 | -> | Plus |
X | 20405870..20406071 | 919..1120 | 100 | Plus | |
X | 20371019..20371045 | 1..25 | 92 | -> | Plus |
Translation from 544 to 996
> HL07789.hyp MSHLVHLTVLLLVGILCLGATSAKPHEEINRDHAAELANECKAETGATDE DVEQLMSHDLPERHEAKCLRACVMKKLQIMDESGKLNKEHAIELVKVMSK HDAEKEDAPAEVVAKCEAIETPEDHCDAAFAYEECIYEQMKEHGLELEEH *
Translation from 544 to 996
> HL07789.pep MSHLVHLTVLLLVGILCLGATSAKPHEEINRDHAAELANECKAETGATDE DVEQLMSHDLPERHEAKCLRACVMKKLQIMDESGKLNKEHAIELVKVMSK HDAEKEDAPAEVVAKCEAIETPEDHCDAAFAYEECIYEQMKEHGLELEEH *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19417-PA | 111 | GF19417-PA | 23..92 | 19..88 | 253 | 67.1 | Plus |
Dana\GF22744-PA | 143 | GF22744-PA | 5..142 | 7..145 | 192 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19289-PA | 150 | GG19289-PA | 20..150 | 20..150 | 610 | 90.8 | Plus |
Dere\GG23526-PA | 143 | GG23526-PA | 4..142 | 8..145 | 215 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17930-PA | 148 | GH17930-PA | 1..148 | 1..150 | 442 | 58.7 | Plus |
Dgri\GH10975-PA | 143 | GH10975-PA | 1..143 | 1..146 | 228 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Obp19d-PB | 150 | CG1668-PB | 1..150 | 1..150 | 787 | 100 | Plus |
Obp19d-PA | 150 | CG1668-PA | 1..150 | 1..150 | 787 | 100 | Plus |
Obp28a-PA | 143 | CG6641-PA | 4..142 | 8..145 | 244 | 38.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16309-PA | 145 | GI16309-PA | 21..145 | 24..148 | 361 | 63.2 | Plus |
Dmoj\GI17488-PA | 143 | GI17488-PA | 33..142 | 36..145 | 200 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26842-PA | 149 | GL26842-PA | 1..145 | 1..147 | 375 | 53.4 | Plus |
Dper\GL26164-PA | 143 | GL26164-PA | 8..142 | 12..145 | 204 | 36.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\Obp19d-PA | 151 | GA14088-PA | 1..147 | 1..147 | 384 | 52.4 | Plus |
Dpse\Obp28a-PA | 143 | GA19746-PA | 8..142 | 12..145 | 204 | 36.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23031-PA | 150 | GM23031-PA | 1..150 | 1..150 | 746 | 97.3 | Plus |
Dsec\GM13537-PA | 143 | GM13537-PA | 4..142 | 8..145 | 221 | 36.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Obp19d-PA | 150 | GD17490-PA | 1..150 | 1..150 | 652 | 96.7 | Plus |
Dsim\Obp28a-PA | 112 | GD22489-PA | 2..111 | 36..145 | 203 | 39.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Obp19d-PA | 148 | GJ15645-PA | 20..148 | 22..150 | 461 | 70.5 | Plus |
Dvir\Obp28a-PA | 143 | GJ15099-PA | 33..142 | 36..145 | 229 | 43.6 | Plus |