BDGP Sequence Production Resources |
Search the DGRC for HL07933
Library: | HL |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 79 |
Well: | 33 |
Vector: | pOT2 |
Associated Gene/Transcript | fau-RA |
Protein status: | HL07933.pep: gold |
Preliminary Size: | 1114 |
Sequenced Size: | 1005 |
Gene | Date | Evidence |
---|---|---|
CG6544 | 2002-06-07 | Blastp of sequenced clone |
CG6544 | 2003-01-01 | Sim4 clustering to Release 3 |
fau | 2008-04-29 | Release 5.5 accounting |
fau | 2008-08-15 | Release 5.9 accounting |
fau | 2008-12-18 | 5.12 accounting |
1005 bp (1005 high quality bases) assembled on 2002-06-07
GenBank Submission: AY119569
> HL07933.complete ACAACACGCAACGACGATATATCCGAACCAAAATCCAACGAACAATTCTA TTTGAAAACTCTCAAAGCATCCAAATCTAAAAATCTCAACATGGTTTACG AAAGTGGATTTACGACCCGCAGAACCTACTCCTCGAGGCCGGTGACAACT TCCTACGCAGTTACGACTCCACGCTTAGACCTGTGCACGGACAGACCGGG CTCGCACCGCAGCCGGGCCTCCTCGGACTACTCGTACACCTCGAAGTCGT CCGTGGAGAAGAGCAGCTACGACTCGAGCAACCCGCACTCGTACCGCCCG GAGCGCTCCACGTACACGTCGACTGTGGAGAAGACGTCGCGCAGCGGTCC CGGCGGCTCGTACAACTACAGCACAGAGCGGACCAGCACCACTGGCGCCG GACCCGGTGGCTACAGCTATTCTTCGACCACCAGCGGCAACCTGCCCGGC GGCACCAAGTACCGCCACTTCTCCTACCACGTGTAGGAGACGCACAGCGT CAAAGGATCGGCGTTGGCTGTCCACGGCTTTGAATGTTATGGTGCCCACT AATACGTCATTGTTCTGAATTTATATATATATATAAATATATACATTTTG CAAATAATCCACTTAACCCGCTAACCTTGAGTGCCCATATATATATATAT ATATTTGTATACGAAGTTTTCAATGATGATGTATTTTCGTTTTGACTTGG ACTAATCACCACTAATGCCCAAATAGTTTCGCATATAGACTAGATTAACC GAACAAGATCAACAATTTCTGTGTGTATTTGCAACCTTCAAGAAGTCATG TTAAAACATATTTGTGATACAATAAAATAAACACGGTCTTATCTCAAATG AACGTAGCATTATATTTTCTTGAAATGAACATATATAGAGGTCGATACGA TATTCATACTGAAGACACAAATTAGGATAAGGAAATCTAAACCGTTTCTG TCAAGAAATATATGAGAGTTGTCAACTCTTTTGAACCAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fau.d | 1364 | fau.d | 378..1364 | 1..987 | 4935 | 100 | Plus |
fau.j | 2101 | fau.j | 1279..2101 | 165..987 | 4115 | 100 | Plus |
fau-RC | 1029 | fau-RC | 378..1029 | 1..652 | 3260 | 100 | Plus |
fau.j | 2101 | fau.j | 68..233 | 1..166 | 830 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 6598717..6599538 | 166..987 | 96 | <- | Minus |
chr3R | 6602697..6602861 | 1..165 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fau-RC | 1..396 | 91..486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fau-RC | 1..396 | 91..486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fau-RC | 1..396 | 91..486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fau-RC | 1..396 | 91..486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fau-RA | 1..396 | 91..486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fau-RC | 21..672 | 1..652 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fau-RC | 28..1014 | 1..987 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fau-RC | 34..1020 | 1..987 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fau-RC | 21..672 | 1..652 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fau-RA | 34..1020 | 1..987 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10773197..10774018 | 166..987 | 100 | <- | Minus |
3R | 10777177..10777341 | 1..165 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10773197..10774018 | 166..987 | 100 | <- | Minus |
3R | 10777177..10777341 | 1..165 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10773197..10774018 | 166..987 | 100 | <- | Minus |
3R | 10777177..10777341 | 1..165 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 6598919..6599740 | 166..987 | 100 | <- | Minus |
arm_3R | 6602899..6603063 | 1..165 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10514028..10514849 | 166..987 | 100 | <- | Minus |
3R | 10518008..10518172 | 1..165 | 100 | Minus |
Translation from 0 to 485
> HL07933.hyp TTRNDDISEPKSNEQFYLKTLKASKSKNLNMVYESGFTTRRTYSSRPVTT SYAVTTPRLDLCTDRPGSHRSRASSDYSYTSKSSVEKSSYDSSNPHSYRP ERSTYTSTVEKTSRSGPGGSYNYSTERTSTTGAGPGGYSYSSTTSGNLPG GTKYRHFSYHV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fau-PA | 131 | CG45077-PA | 1..131 | 31..161 | 695 | 100 | Plus |
Translation from 90 to 485
> HL07933.pep MVYESGFTTRRTYSSRPVTTSYAVTTPRLDLCTDRPGSHRSRASSDYSYT SKSSVEKSSYDSSNPHSYRPERSTYTSTVEKTSRSGPGGSYNYSTERTST TGAGPGGYSYSSTTSGNLPGGTKYRHFSYHV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17091-PA | 851 | GF17091-PA | 158..261 | 26..130 | 499 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17266-PA | 724 | GG17266-PA | 1..131 | 1..131 | 678 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19567-PA | 895 | GH19567-PA | 158..261 | 26..130 | 505 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fau-PA | 131 | CG45077-PA | 1..131 | 1..131 | 695 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23863-PA | 912 | GI23863-PA | 158..261 | 26..130 | 497 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21932-PA | 798 | GL21932-PA | 139..247 | 21..130 | 487 | 89.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19674-PD | 130 | GA19674-PD | 1..130 | 1..131 | 583 | 91.6 | Plus |
Dpse\GA19674-PF | 827 | GA19674-PF | 139..248 | 21..131 | 490 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20704-PA | 200 | GD20704-PA | 1..131 | 1..131 | 645 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10576-PA | 887 | GJ10576-PA | 139..247 | 21..130 | 503 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13394-PA | 891 | GK13394-PA | 158..260 | 26..130 | 495 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\fau-PA | 907 | GE24668-PA | 158..262 | 26..130 | 544 | 99 | Plus |