BDGP Sequence Production Resources |
Search the DGRC for HL08006
Library: | HL |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 80 |
Well: | 6 |
Vector: | pOT2 |
Associated Gene/Transcript | ade5-RA |
Protein status: | HL08006.pep: gold |
Preliminary Size: | 1858 |
Sequenced Size: | 1810 |
Gene | Date | Evidence |
---|---|---|
CG3989 | 2001-01-01 | Release 2 assignment |
CG3989 | 2001-11-09 | Blastp of sequenced clone |
CG3989 | 2003-01-01 | Sim4 clustering to Release 3 |
ade5 | 2008-04-29 | Release 5.5 accounting |
ade5 | 2008-08-15 | Release 5.9 accounting |
ade5 | 2008-12-18 | 5.12 accounting |
1810 bp (1810 high quality bases) assembled on 2001-11-09
GenBank Submission: AY095520
> HL08006.complete ACGAACATCGGAGTTTGCGGATTGTAATAATAGAGCCAAGCGGAGAGAGC GAAAAAGACAGAGAGAGAGATAGAGAGCGAGAGCGAGAGGGAAGGCACCA GCGAATATCGAGCATAAAGCAAAGCCCGCAACACGTGAAACAGCCAGCAG CCAATTGATTTCAATTTCGATTCTTAAAGTGAAGTGACCAACAACGTGCG ATTAACGAGATGTCCACCACCACAACAGCATCCATAGAGGGCTATAAGCT CGGCAAGGTCATCATCGAGGGCAAAACCAAACAGGTGTACGATCTGCCAG AGCAGCCAGGACTTTGCCTGCTCCTCAGCAAGGATCGCATCACCGCCGGC GATGGTGTCAAAGCACATGATCTGGCCGGCAAGGCGGAGATCTCCAATAC CACCAACGGTCAGGTCTTCCGGCTGCTCAACGAGGCAGGCATTCGCACCG CCTATGTGAAGCAGTGCGGCGCCAAGGCCTTCATCGCCCGCAAGTGCCAG ATGATACCCATTGAGTGGGTGACCCGTCGCCTGGCCACCGGTTCGTTCCT CAAGCGCAATGTCGGCGTGCCCGAGGGCTACAGGTTCTCGCCGCCCAAAC AGGAGACGTTCTTCAAGGATGATGCCAACCACGATCCCCAGTGGAGCGAG GAGCAAATTGTCTCCGCCAAGTTCGAGCTAAATGGCCTGGTGATCGGCCA AGATGAGGTGGACATTATGCGTAGAACCACACTGCTGGTCTTCGAGATTC TCGAGAGGGCATGGCAGACCAAGAATTGCGCCCTGATCGACATGAAAGTG GAGTTCGGTATCTGCGACGATGGCAACATAGTTCTGGCCGATATCATTGA TTCCGATTCGTGGCGCTTGTGGCCAGCGGGTGACAAGCGTTTGATGGTCG ACAAGCAGGTGTATCGCAATCTGGCATCGGTGACGGCCAGCGATTTGGAT ACCGTAAAGAGGAACTTCATTTGGGTGGCCGAACAACTGGCTGATATTGT GCCCAAGAAGGATCACCTGGTTGTCATTCTGATGGGCAGTGCTTCCGATA TATCGCACAGCGAGAAGATAGCCACCAGCTGTCGATCCCTCGGCCTTAAT GTGGAACTTCGCGTGAGTTCGGCCCACAAGGGACCGGAGGAAACGTTGCG CATTGTCCGCGAATATGAATCGGTGATGAGCAACTTGATCTTTGTGGCCG TCGCCGGGCGATCCAATGGACTGGGTCCAGTCGTTTCCGGCAGCACCAAC TATCCGGTAATCAATTGTCCGCCCGTCAAATCGGACAACATGCAGGTGGA CGTGTGGTCCAGCTTGAATCTGCCATCGGGGCTGGGCTGTGCCACAGTTC TCTATCCAGAGGCAGCTGCTCTGCATGCGGCCACCATTCTGGGGCTGGGC AACTTCATGGTCTGGTCGAAATTGCGTGTCAAGGCGCTCAACAACTTTAT CACTCTCAAGAAGGCCGACAAGGAGTTGCGCGGCGTGCGAAATGCTTAGT TGCTGGTTATCATAGCTTATGGTGGGAGATATCAGCATTGGATATCAACC AGGAGGCCATATATAGAGAATCCTTCCCTGATCATTGCCGTTCGGCGATC ATCCAGGGATCCCATAAAGGTCATCATCAGATCACATACTTTGTTAATTC TTCTTTCTCCTATTTTTTTTTTTTTTGAAACCAAACATTTTTTTATTAGT ATTAGGAAAGCATGACTTCAACTTGTTGTACCACGTTCTTGACAGGTTAC GAACTCGAAATAACAAAAAATAAAAATTACATTTTAAATGTTAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 12648653..12649748 | 1792..696 | 5390 | 99.6 | Minus |
chrX | 22417052 | chrX | 12650600..12650802 | 439..237 | 1015 | 100 | Minus |
chrX | 22417052 | chrX | 12651250..12651477 | 234..1 | 1015 | 96.6 | Minus |
chrU | 10048995 | chrU | 9850172..9850374 | 439..237 | 925 | 97 | Minus |
chrU | 10048995 | chrU | 2929600..2929802 | 439..237 | 910 | 96.6 | Minus |
chrU | 10048995 | chrU | 8923744..8923946 | 237..439 | 910 | 96.6 | Plus |
chrX | 22417052 | chrX | 12650353..12650503 | 586..436 | 740 | 99.3 | Minus |
chr2L | 23010047 | chr2L | 12452355..12453007 | 252..904 | 700 | 73.8 | Plus |
chrU | 10048995 | chrU | 6763163..6763378 | 234..1 | 685 | 87.2 | Minus |
chrU | 10048995 | chrU | 2930228..2930435 | 234..9 | 675 | 87.6 | Minus |
chrU | 10048995 | chrU | 9898075..9898221 | 237..383 | 645 | 95.9 | Plus |
chrU | 10048995 | chrU | 8924042..8924189 | 435..586 | 620 | 95.4 | Plus |
chrX | 22417052 | chrX | 12649815..12649931 | 697..581 | 570 | 99.1 | Minus |
chrU | 10048995 | chrU | 6762536..6762678 | 379..237 | 565 | 93 | Minus |
chrU | 10048995 | chrU | 2929374..2929504 | 569..435 | 550 | 95.6 | Minus |
chrU | 10048995 | chrU | 9897494..9897694 | 9..234 | 550 | 85 | Plus |
chrU | 10048995 | chrU | 9849976..9850101 | 569..440 | 510 | 94.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 12757759..12758855 | 1793..696 | 5440 | 99.9 | Minus |
X | 23542271 | X | 12760349..12760582 | 234..1 | 1170 | 100 | Minus |
X | 23542271 | X | 12759711..12759915 | 439..235 | 1025 | 100 | Minus |
Y | 3667352 | Y | 3059275..3059477 | 439..237 | 925 | 97 | Minus |
Y | 3667352 | Y | 3231313..3231515 | 237..439 | 925 | 97 | Plus |
Y | 3667352 | Y | 3267332..3267534 | 439..237 | 910 | 96.6 | Minus |
U | 3151297 | U | 2460018..2460220 | 237..439 | 910 | 96.6 | Plus |
X | 23542271 | X | 12759460..12759610 | 586..436 | 755 | 100 | Minus |
Y | 3667352 | Y | 3059906..3060121 | 234..1 | 700 | 87.6 | Minus |
Y | 3667352 | Y | 3205124..3205339 | 1..234 | 700 | 87.6 | Plus |
Y | 3667352 | Y | 3230669..3230884 | 1..234 | 700 | 87.6 | Plus |
2L | 23513712 | 2L | 12453715..12454367 | 252..904 | 700 | 73.8 | Plus |
Y | 3667352 | Y | 3092358..3092573 | 234..1 | 685 | 87.2 | Minus |
Ymm | 880023 | Ymm | 632030..632245 | 234..1 | 685 | 87.2 | Minus |
Y | 3667352 | Y | 3267960..3268167 | 234..9 | 675 | 87.6 | Minus |
Ymm | 880023 | Ymm | 562058..562204 | 237..383 | 645 | 95.9 | Plus |
Y | 3667352 | Y | 3267089..3267236 | 586..435 | 620 | 95.4 | Minus |
U | 3151297 | U | 2460316..2460463 | 435..586 | 620 | 95.4 | Plus |
X | 23542271 | X | 12758922..12759038 | 697..581 | 585 | 100 | Minus |
Y | 3667352 | Y | 3059062..3059204 | 586..440 | 580 | 94.6 | Minus |
Y | 3667352 | Y | 3091728..3091870 | 379..237 | 565 | 93 | Minus |
Y | 3667352 | Y | 3205824..3205966 | 237..379 | 565 | 93 | Plus |
Ymm | 880023 | Ymm | 631403..631545 | 379..237 | 565 | 93 | Minus |
Ymm | 880023 | Ymm | 561477..561677 | 9..234 | 550 | 85 | Plus |
Y | 3667352 | Y | 3231586..3231711 | 440..569 | 510 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 12765857..12766953 | 1793..696 | 5450 | 99.9 | Minus |
X | 23527363 | X | 12768447..12768680 | 234..1 | 1170 | 100 | Minus |
X | 23527363 | X | 12767809..12768013 | 439..235 | 1025 | 100 | Minus |
Y | 3410481 | Y | 3077783..3077985 | 237..439 | 925 | 97 | Plus |
Y | 3410481 | Y | 2905745..2905947 | 439..237 | 925 | 97 | Minus |
Unmapped_scaffold_16 | 28895 | Unmapped_scaffold_16 | 12189..12391 | 439..237 | 910 | 96.5 | Minus |
X | 23527363 | X | 12767558..12767708 | 586..436 | 755 | 100 | Minus |
Y | 3410481 | Y | 3077199..3077354 | 79..234 | 660 | 94.8 | Plus |
Y | 3410481 | Y | 3051654..3051809 | 79..234 | 660 | 94.8 | Plus |
Y | 3410481 | Y | 2906376..2906531 | 234..79 | 660 | 94.8 | Minus |
Unmapped_scaffold_16 | 28895 | Unmapped_scaffold_16 | 12817..12972 | 234..79 | 660 | 94.8 | Minus |
Y | 3410481 | Y | 2938828..2938983 | 234..79 | 645 | 94.2 | Minus |
Unmapped_scaffold_16 | 28895 | Unmapped_scaffold_16 | 11946..12093 | 586..435 | 630 | 95.3 | Minus |
Y | 3410481 | Y | 2905532..2905674 | 586..440 | 590 | 94.5 | Minus |
X | 23527363 | X | 12767020..12767136 | 697..581 | 585 | 100 | Minus |
Y | 3410481 | Y | 3052294..3052436 | 237..379 | 565 | 93 | Plus |
Y | 3410481 | Y | 2938198..2938340 | 379..237 | 565 | 93 | Minus |
Y | 3410481 | Y | 3078056..3078181 | 440..569 | 520 | 94.6 | Plus |
2L | 23513712 | 2L | 12454066..12454367 | 603..904 | 385 | 75.1 | Plus |
Y | 3410481 | Y | 3077139..3077207 | 1..69 | 285 | 94.2 | Plus |
Y | 3410481 | Y | 3051594..3051662 | 1..69 | 285 | 94.2 | Plus |
Y | 3410481 | Y | 2906523..2906591 | 69..1 | 285 | 94.2 | Minus |
Y | 3410481 | Y | 2938975..2939043 | 69..1 | 285 | 94.2 | Minus |
2L | 23513712 | 2L | 12453841..12454004 | 378..541 | 265 | 77.4 | Plus |
Unmapped_scaffold_16 | 28895 | Unmapped_scaffold_16 | 12964..13024 | 69..9 | 260 | 95 | Minus |
2L | 23513712 | 2L | 12453715..12453803 | 252..340 | 175 | 79.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 12649816..12649928 | 584..696 | 99 | <- | Minus |
chrX | 12650356..12650500 | 439..583 | 99 | <- | Minus |
chrX | 12650601..12650804 | 235..438 | 99 | <- | Minus |
chrX | 12648653..12649747 | 697..1792 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ade5-RA | 1..1290 | 210..1499 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ade5-RA | 1..1290 | 210..1499 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ade5-RA | 1..1290 | 210..1499 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ade5-RA | 1..1290 | 210..1499 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ade5-RA | 1..1290 | 210..1499 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ade5-RA | 37..1827 | 1..1792 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ade5-RA | 37..1827 | 1..1792 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ade5-RA | 36..1826 | 1..1792 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ade5-RA | 37..1827 | 1..1792 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ade5-RA | 36..1826 | 1..1792 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12757760..12758854 | 697..1792 | 99 | <- | Minus |
X | 12758923..12759035 | 584..696 | 100 | <- | Minus |
X | 12759463..12759607 | 439..583 | 100 | <- | Minus |
X | 12759712..12759915 | 235..438 | 100 | <- | Minus |
X | 12760349..12760582 | 1..234 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12757760..12758854 | 697..1792 | 99 | <- | Minus |
X | 12758923..12759035 | 584..696 | 100 | <- | Minus |
X | 12759463..12759607 | 439..583 | 100 | <- | Minus |
X | 12759712..12759915 | 235..438 | 100 | <- | Minus |
X | 12760349..12760582 | 1..234 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12757760..12758854 | 697..1792 | 99 | <- | Minus |
X | 12758923..12759035 | 584..696 | 100 | <- | Minus |
X | 12759463..12759607 | 439..583 | 100 | <- | Minus |
X | 12759712..12759915 | 235..438 | 100 | <- | Minus |
X | 12760349..12760582 | 1..234 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 12651793..12652887 | 697..1792 | 99 | <- | Minus |
arm_X | 12652956..12653068 | 584..696 | 100 | <- | Minus |
arm_X | 12653496..12653640 | 439..583 | 100 | <- | Minus |
arm_X | 12653745..12653948 | 235..438 | 100 | <- | Minus |
arm_X | 12654382..12654615 | 1..234 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12767810..12768013 | 235..438 | 100 | <- | Minus |
X | 12768447..12768680 | 1..234 | 100 | Minus | |
X | 12765858..12766952 | 697..1792 | 99 | <- | Minus |
X | 12767021..12767133 | 584..696 | 100 | <- | Minus |
X | 12767561..12767705 | 439..583 | 100 | <- | Minus |
Translation from 209 to 1498
> HL08006.hyp MSTTTTASIEGYKLGKVIIEGKTKQVYDLPEQPGLCLLLSKDRITAGDGV KAHDLAGKAEISNTTNGQVFRLLNEAGIRTAYVKQCGAKAFIARKCQMIP IEWVTRRLATGSFLKRNVGVPEGYRFSPPKQETFFKDDANHDPQWSEEQI VSAKFELNGLVIGQDEVDIMRRTTLLVFEILERAWQTKNCALIDMKVEFG ICDDGNIVLADIIDSDSWRLWPAGDKRLMVDKQVYRNLASVTASDLDTVK RNFIWVAEQLADIVPKKDHLVVILMGSASDISHSEKIATSCRSLGLNVEL RVSSAHKGPEETLRIVREYESVMSNLIFVAVAGRSNGLGPVVSGSTNYPV INCPPVKSDNMQVDVWSSLNLPSGLGCATVLYPEAAALHAATILGLGNFM VWSKLRVKALNNFITLKKADKELRGVRNA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ade5-PA | 429 | CG3989-PA | 1..429 | 1..429 | 2207 | 100 | Plus |
ade5-PB | 428 | CG3989-PB | 1..428 | 1..429 | 2187 | 99.5 | Plus |
CG40801-PB | 142 | CG40801-PB | 19..122 | 9..112 | 524 | 97.1 | Plus |
Translation from 209 to 1498
> HL08006.pep MSTTTTASIEGYKLGKVIIEGKTKQVYDLPEQPGLCLLLSKDRITAGDGV KAHDLAGKAEISNTTNGQVFRLLNEAGIRTAYVKQCGAKAFIARKCQMIP IEWVTRRLATGSFLKRNVGVPEGYRFSPPKQETFFKDDANHDPQWSEEQI VSAKFELNGLVIGQDEVDIMRRTTLLVFEILERAWQTKNCALIDMKVEFG ICDDGNIVLADIIDSDSWRLWPAGDKRLMVDKQVYRNLASVTASDLDTVK RNFIWVAEQLADIVPKKDHLVVILMGSASDISHSEKIATSCRSLGLNVEL RVSSAHKGPEETLRIVREYESVMSNLIFVAVAGRSNGLGPVVSGSTNYPV INCPPVKSDNMQVDVWSSLNLPSGLGCATVLYPEAAALHAATILGLGNFM VWSKLRVKALNNFITLKKADKELRGVRNA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20891-PA | 426 | GF20891-PA | 3..426 | 6..429 | 2183 | 95 | Plus |
Dana\GF20892-PA | 194 | GF20892-PA | 1..159 | 17..175 | 722 | 84.3 | Plus |
Dana\GF20892-PA | 194 | GF20892-PA | 145..194 | 380..429 | 241 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19541-PA | 428 | GG19541-PA | 1..428 | 1..429 | 2258 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12574-PA | 428 | GH12574-PA | 3..428 | 4..429 | 2089 | 89.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Paics-PA | 429 | CG3989-PA | 1..429 | 1..429 | 2207 | 100 | Plus |
Paics-PB | 428 | CG3989-PB | 1..428 | 1..429 | 2187 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14693-PA | 428 | GI14693-PA | 1..427 | 1..428 | 2159 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15026-PA | 433 | GL15026-PA | 12..433 | 8..429 | 2161 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17827-PA | 426 | GA17827-PA | 2..426 | 5..429 | 2178 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11535-PA | 428 | GM11535-PA | 1..428 | 1..429 | 2246 | 98.1 | Plus |
Dsec\GM26849-PA | 370 | GM26849-PA | 5..366 | 8..429 | 1242 | 57.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15919-PA | 428 | GD15919-PA | 1..428 | 1..429 | 2261 | 98.8 | Plus |
Dsim\GD23841-PA | 413 | GD23841-PA | 4..408 | 7..428 | 1459 | 64.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16601-PA | 430 | GJ16601-PA | 10..429 | 9..428 | 2146 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16398-PA | 447 | GK16398-PA | 27..447 | 9..429 | 2151 | 94.3 | Plus |
Dwil\GK23628-PA | 233 | GK23628-PA | 4..233 | 178..429 | 996 | 76.2 | Plus |
Dwil\GK17812-PA | 155 | GK17812-PA | 1..155 | 229..401 | 644 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\ade5-PA | 428 | GE16201-PA | 1..428 | 1..429 | 2252 | 98.8 | Plus |