![]() | BDGP Sequence Production Resources |
Search the DGRC for HL08032
Library: | HL |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 80 |
Well: | 32 |
Vector: | pOT2 |
Associated Gene/Transcript | cbx-RB |
Protein status: | HL08032.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 904 |
Gene | Date | Evidence |
---|---|---|
CG10536 | 2001-07-04 | Blastp of sequenced clone |
CG10536 | 2003-01-01 | Sim4 clustering to Release 3 |
cbx | 2008-04-29 | Release 5.5 accounting |
cbx | 2008-08-15 | Release 5.9 accounting |
cbx | 2008-12-18 | 5.12 accounting |
904 bp (904 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051650
> HL08032.complete TTCAACAAGCAACAAAATTGTCCGTTTGTTTATGTTACTAGTTTTTTGTT TAATTTTTCTATTGTCCGGACAAAATGACTCTCGATTTGGATGCGCATAA GAAAGATGACAAGTTGCTGATCACAACCATACAGCAGGAGTATAAAATTC TGGCCGAATACAAAATGATTGAGTCGGAGAAGTTGAGTGGGATATATGTG ATACCCAGCTATGCTAACTCCTTGCAGTGGTTTGGAGTCTTCTTTGGCCG ACAGGGCTTGTATGCGGAAAGTGTTTTTCGATTCACAATTTTGCTCCCAG ATCGTTTTCCCGACGACAAAAGTCTTCCGAGCATAATTTTCCAGCAGGAT GTGATTCATCCCCATGTGTGCCCGTACACCCACAGTTTGGACGTGAGCCA CGCCTTCCCGGAGTGGCGCTGTGGAGAGGATCACCTTTGGCAGCTTTTAA AGTACCTGCAAGTCATTTTCTCCGATCCCTTGGACAGTATTCGGGGCATT GAGGTAGATAAGCTCAAAAACAGCGAGGCTGCGGAGCTGCTGATGAATAA CAAGGAGGAGTATGTTGCTCGCGTACAGGAAAATATCAAGGAGAGCAAGG AGCATATATTTGACACCCCACCCACCGAAGATCCGCACTACATAGTATTC GAGAAGTTCCAGCAGGACGTGCACGGGCCCGTTCTGGAGCGCATCAAGGC CGGAAGAAGCAAGCTGACGGAGCCTTCAGCGCAACAAGCAAATGGTGGAC ATGCAACTGGTCTGTCATGGGTTAAGGAGGGCGAGTTTAAGCCACTTAGC ATTGAGTAAAACCAATATACATATATTCTGTAAGTTATATTCTATCGTTG TCTCAATTTTAAAACGATTAAAGTTATTCAATTAAAAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 5751994..5752548 | 883..329 | 2775 | 100 | Minus |
chr2R | 21145070 | chr2R | 5752902..5753061 | 160..1 | 800 | 100 | Minus |
chr2R | 21145070 | chr2R | 5752602..5752705 | 329..226 | 520 | 100 | Minus |
chr2R | 21145070 | chr2R | 5752768..5752832 | 225..161 | 325 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 9864515..9865070 | 884..329 | 2780 | 100 | Minus |
2R | 25286936 | 2R | 9865424..9865583 | 160..1 | 800 | 100 | Minus |
2R | 25286936 | 2R | 9865124..9865227 | 329..226 | 520 | 100 | Minus |
2R | 25286936 | 2R | 9865290..9865354 | 225..161 | 325 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 9865714..9866269 | 884..329 | 2780 | 100 | Minus |
2R | 25260384 | 2R | 9866623..9866782 | 160..1 | 800 | 100 | Minus |
2R | 25260384 | 2R | 9866323..9866426 | 329..226 | 520 | 100 | Minus |
2R | 25260384 | 2R | 9866489..9866553 | 225..161 | 325 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5751994..5752547 | 330..883 | 100 | <- | Minus |
chr2R | 5752602..5752705 | 226..329 | 100 | <- | Minus |
chr2R | 5752768..5752832 | 161..225 | 100 | <- | Minus |
chr2R | 5752902..5753061 | 1..160 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cbx-RB | 1..735 | 75..809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cbx-RB | 1..735 | 75..809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cbx-RB | 1..735 | 75..809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cbx-RB | 1..735 | 75..809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cbx-RB | 1..735 | 75..809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cbx-RB | 1..883 | 1..883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cbx-RB | 10..892 | 1..883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cbx-RB | 20..902 | 1..883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cbx-RB | 1..883 | 1..883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cbx-RB | 20..902 | 1..883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9864516..9865069 | 330..883 | 100 | <- | Minus |
2R | 9865124..9865227 | 226..329 | 100 | <- | Minus |
2R | 9865290..9865354 | 161..225 | 100 | <- | Minus |
2R | 9865424..9865583 | 1..160 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9864516..9865069 | 330..883 | 100 | <- | Minus |
2R | 9865124..9865227 | 226..329 | 100 | <- | Minus |
2R | 9865290..9865354 | 161..225 | 100 | <- | Minus |
2R | 9865424..9865583 | 1..160 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9864516..9865069 | 330..883 | 100 | <- | Minus |
2R | 9865124..9865227 | 226..329 | 100 | <- | Minus |
2R | 9865290..9865354 | 161..225 | 100 | <- | Minus |
2R | 9865424..9865583 | 1..160 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5752021..5752574 | 330..883 | 100 | <- | Minus |
arm_2R | 5752629..5752732 | 226..329 | 100 | <- | Minus |
arm_2R | 5752795..5752859 | 161..225 | 100 | <- | Minus |
arm_2R | 5752929..5753088 | 1..160 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9865715..9866268 | 330..883 | 100 | <- | Minus |
2R | 9866323..9866426 | 226..329 | 100 | <- | Minus |
2R | 9866489..9866553 | 161..225 | 100 | <- | Minus |
2R | 9866623..9866782 | 1..160 | 100 | Minus |
Translation from 74 to 808
> HL08032.hyp MTLDLDAHKKDDKLLITTIQQEYKILAEYKMIESEKLSGIYVIPSYANSL QWFGVFFGRQGLYAESVFRFTILLPDRFPDDKSLPSIIFQQDVIHPHVCP YTHSLDVSHAFPEWRCGEDHLWQLLKYLQVIFSDPLDSIRGIEVDKLKNS EAAELLMNNKEEYVARVQENIKESKEHIFDTPPTEDPHYIVFEKFQQDVH GPVLERIKAGRSKLTEPSAQQANGGHATGLSWVKEGEFKPLSIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
cbx-PB | 244 | CG10536-PB | 1..244 | 1..244 | 1290 | 100 | Plus |
cbx-PA | 214 | CG10536-PA | 1..214 | 31..244 | 1139 | 100 | Plus |
cbx-PC | 183 | CG10536-PC | 1..183 | 31..244 | 937 | 85.5 | Plus |
CG16894-PA | 266 | CG16894-PA | 11..211 | 16..209 | 492 | 45.5 | Plus |
Translation from 74 to 808
> HL08032.pep MTLDLDAHKKDDKLLITTIQQEYKILAEYKMIESEKLSGIYVIPSYANSL QWFGVFFGRQGLYAESVFRFTILLPDRFPDDKSLPSIIFQQDVIHPHVCP YTHSLDVSHAFPEWRCGEDHLWQLLKYLQVIFSDPLDSIRGIEVDKLKNS EAAELLMNNKEEYVARVQENIKESKEHIFDTPPTEDPHYIVFEKFQQDVH GPVLERIKAGRSKLTEPSAQQANGGHATGLSWVKEGEFKPLSIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13050-PA | 242 | GF13050-PA | 1..242 | 1..244 | 1158 | 86.9 | Plus |
Dana\GF13159-PA | 266 | GF13159-PA | 11..211 | 16..209 | 495 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25253-PA | 244 | GG25253-PA | 1..244 | 1..244 | 1249 | 95.1 | Plus |
Dere\GG20882-PA | 266 | GG20882-PA | 11..211 | 16..209 | 502 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20212-PA | 246 | GH20212-PA | 1..246 | 1..244 | 880 | 70 | Plus |
Dgri\GH22748-PA | 211 | GH22748-PA | 6..206 | 9..205 | 536 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG46338-PB | 244 | CG46338-PB | 1..244 | 1..244 | 1290 | 100 | Plus |
CG46338-PA | 214 | CG46338-PA | 1..214 | 31..244 | 1139 | 100 | Plus |
CG46338-PC | 183 | CG46338-PC | 1..183 | 31..244 | 937 | 85.5 | Plus |
CG16894-PA | 266 | CG16894-PA | 11..211 | 16..209 | 492 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20739-PA | 245 | GI20739-PA | 1..245 | 1..244 | 975 | 72.1 | Plus |
Dmoj\GI18531-PA | 256 | GI18531-PA | 13..213 | 16..210 | 552 | 47.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10235-PA | 244 | GL10235-PA | 1..244 | 1..244 | 1128 | 83.2 | Plus |
Dper\GL11711-PA | 262 | GL11711-PA | 13..228 | 18..220 | 487 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10380-PA | 244 | GA10380-PA | 1..244 | 1..244 | 1128 | 83.2 | Plus |
Dpse\GA10380-PB | 214 | GA10380-PB | 1..214 | 31..244 | 981 | 81.8 | Plus |
Dpse\GA14202-PA | 262 | GA14202-PA | 13..228 | 18..220 | 481 | 43.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20572-PA | 244 | GM20572-PA | 1..244 | 1..244 | 1274 | 97.5 | Plus |
Dsec\GM19805-PA | 266 | GM19805-PA | 11..211 | 16..209 | 492 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10043-PA | 244 | GD10043-PA | 1..244 | 1..244 | 1283 | 98.4 | Plus |
Dsim\GD25298-PA | 188 | GD25298-PA | 11..151 | 16..156 | 328 | 46.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20476-PA | 245 | GJ20476-PA | 1..245 | 1..244 | 966 | 71.7 | Plus |
Dvir\GJ21397-PA | 256 | GJ21397-PA | 13..212 | 16..209 | 562 | 49 | Plus |