BDGP Sequence Production Resources |
Search the DGRC for HL08042
Library: | HL |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 80 |
Well: | 42 |
Vector: | pOT2 |
Associated Gene/Transcript | wupA-RD |
Protein status: | HL08042.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 950 |
Gene | Date | Evidence |
---|---|---|
CG7178 | 2001-01-01 | Release 2 assignment |
CG7178 | 2002-06-12 | Blastp of sequenced clone |
CG7178 | 2003-01-01 | Sim4 clustering to Release 3 |
wupA | 2008-04-29 | Release 5.5 accounting |
wupA | 2008-08-15 | Release 5.9 accounting |
wupA | 2008-12-18 | 5.12 accounting |
950 bp (950 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122145
> HL08042.complete TGTGATCGACAGCATAGCCGAATTTTTTTTCTTTTTTTTCTAATTCCTTG AAGTAACCAAAAACACAAATCAAAATGGCTGATGATGAGGCTAAGAAGGC TAAACAGGCTGAGATCGAGCGCAAGCGTGCTGAGGTGCGCAAGCGCATGG AGGAAGCCTCCAAGGCCAAGAAGGCCAAGAAGGGTTTCATGACCCCAGAG AGGAAGAAGAAACTCAGGTTGCTGCTGCGTAAGAAAGCCGCTGAGGAGCT GAAGAAAGAACAGGAACGCAAAGCGGCTGAACGTAGACGCATCATCGAAG AACGTTGCGGCAGTCCCAGGAATCTCAGCGATGCCAGCGAAGCCGAACTG CAAACAATATGCAAACAATATTGGCAACGCGTATACAGTTTGGAGGGCGA TAAGTTTGATTTAGAACACGTGCAGAAAGTCAAGGCCCAAGAGATCAACG ATCTCAATGCCCAAGTTAACGATCTTCGCGGCAAGTTCGTCAAGCCAGCC CTGAAGAAGGTCTCCAAATACGAAAACAAATTCGCCAAGCTGCAGAAGAA GGCCGCTGAGTTCAACTTCCGCAACCAGCTCAAGGTGGTGAAGAAGAAGG AGTTCACGCTGGAGGAGGAGGAGAAGGAGAAGAAACCCGACTGGTCCAAG GGCAAGCCCGGAGATGCCAAGGTGAAGGAGGAGGTTGAGGCCGAAGCTTA AGTGTCCACACGTCCACTAGTGTCCACTGACCCGTGACTCCCGCCCTAAA CAATAATTGAAATTATTTACAACAATTATCTGAAGCAATATAATTTATAT GAATCTATTAATATATATATATATCCGCAAATATATATGCATGTATATAT CTCGCCATATATATGTGTCCACAATGGATTTGATCAGAAATGAAGTCAAT AAACAACAACAGCAACAACTAAATTAACTCAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wupA-RD | 1196 | wupA-RD | 88..1021 | 1..934 | 4670 | 100 | Plus |
wupA.f | 1379 | wupA.f | 271..1204 | 1..934 | 4670 | 100 | Plus |
wupA.c | 1252 | wupA.c | 101..731 | 1..631 | 3155 | 100 | Plus |
wupA.c | 1252 | wupA.c | 773..1077 | 630..934 | 1525 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 17995045..17995347 | 930..628 | 1515 | 100 | Minus |
chrX | 22417052 | chrX | 17995994..17996135 | 629..488 | 710 | 100 | Minus |
chrX | 22417052 | chrX | 18002767..18002897 | 218..88 | 655 | 100 | Minus |
chrX | 22417052 | chrX | 18002578..18002702 | 342..218 | 625 | 100 | Minus |
chrX | 22417052 | chrX | 17999825..17999927 | 443..341 | 515 | 100 | Minus |
chrX | 22417052 | chrX | 18006037..18006089 | 53..1 | 265 | 100 | Minus |
chrX | 22417052 | chrX | 17996201..17996246 | 487..442 | 230 | 100 | Minus |
chrX | 22417052 | chrX | 18003930..18003968 | 90..52 | 195 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 18105728..18106034 | 934..628 | 1535 | 100 | Minus |
X | 23542271 | X | 18106681..18106822 | 629..488 | 710 | 100 | Minus |
X | 23542271 | X | 18113447..18113577 | 218..88 | 655 | 100 | Minus |
X | 23542271 | X | 18113258..18113382 | 342..218 | 625 | 100 | Minus |
X | 23542271 | X | 18110504..18110606 | 443..341 | 515 | 100 | Minus |
X | 23542271 | X | 18116707..18116759 | 53..1 | 265 | 100 | Minus |
X | 23542271 | X | 18106888..18106933 | 487..442 | 230 | 100 | Minus |
X | 23542271 | X | 18114610..18114648 | 90..52 | 195 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 18113826..18114132 | 934..628 | 1535 | 100 | Minus |
X | 23527363 | X | 18114779..18114920 | 629..488 | 710 | 100 | Minus |
X | 23527363 | X | 18121545..18121675 | 218..88 | 655 | 100 | Minus |
X | 23527363 | X | 18121356..18121480 | 342..218 | 625 | 100 | Minus |
X | 23527363 | X | 18118602..18118704 | 443..341 | 515 | 100 | Minus |
X | 23527363 | X | 18124805..18124857 | 53..1 | 265 | 100 | Minus |
X | 23527363 | X | 18114986..18115031 | 487..442 | 230 | 100 | Minus |
X | 23527363 | X | 18122708..18122746 | 90..52 | 195 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 1993..2036 | 874..916 | 109 | 75 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 17995994..17996135 | 488..629 | 100 | <- | Minus |
chrX | 17996201..17996244 | 444..487 | 100 | <- | Minus |
chrX | 17999825..17999925 | 343..443 | 100 | <- | Minus |
chrX | 18002578..18002701 | 219..342 | 100 | <- | Minus |
chrX | 18002767..18002895 | 90..218 | 100 | <- | Minus |
chrX | 18003931..18003966 | 54..89 | 100 | <- | Minus |
chrX | 18006037..18006089 | 1..53 | 100 | Minus | |
chrX | 17995188..17995345 | 630..787 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RE | 1..627 | 75..701 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RE | 1..627 | 75..701 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RD | 1..627 | 75..701 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RE | 1..627 | 75..701 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RD | 1..627 | 75..701 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RD | 64..993 | 1..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RD | 64..993 | 1..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RD | 67..996 | 1..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RD | 64..993 | 1..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RD | 164..1093 | 1..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18105732..18106032 | 630..930 | 100 | <- | Minus |
X | 18106681..18106822 | 488..629 | 100 | <- | Minus |
X | 18106888..18106931 | 444..487 | 100 | <- | Minus |
X | 18110504..18110604 | 343..443 | 100 | <- | Minus |
X | 18113258..18113381 | 219..342 | 100 | <- | Minus |
X | 18113447..18113575 | 90..218 | 100 | <- | Minus |
X | 18114611..18114646 | 54..89 | 100 | <- | Minus |
X | 18116707..18116759 | 1..53 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18105732..18106032 | 630..930 | 100 | <- | Minus |
X | 18106681..18106822 | 488..629 | 100 | <- | Minus |
X | 18106888..18106931 | 444..487 | 100 | <- | Minus |
X | 18110504..18110604 | 343..443 | 100 | <- | Minus |
X | 18113258..18113381 | 219..342 | 100 | <- | Minus |
X | 18113447..18113575 | 90..218 | 100 | <- | Minus |
X | 18114611..18114646 | 54..89 | 100 | <- | Minus |
X | 18116707..18116759 | 1..53 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18105732..18106032 | 630..930 | 100 | <- | Minus |
X | 18106681..18106822 | 488..629 | 100 | <- | Minus |
X | 18106888..18106931 | 444..487 | 100 | <- | Minus |
X | 18110504..18110604 | 343..443 | 100 | <- | Minus |
X | 18113258..18113381 | 219..342 | 100 | <- | Minus |
X | 18113447..18113575 | 90..218 | 100 | <- | Minus |
X | 18114611..18114646 | 54..89 | 100 | <- | Minus |
X | 18116707..18116759 | 1..53 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 17999765..18000065 | 630..930 | 100 | <- | Minus |
arm_X | 18000714..18000855 | 488..629 | 100 | <- | Minus |
arm_X | 18000921..18000964 | 444..487 | 100 | <- | Minus |
arm_X | 18004537..18004637 | 343..443 | 100 | <- | Minus |
arm_X | 18007291..18007414 | 219..342 | 100 | <- | Minus |
arm_X | 18007480..18007608 | 90..218 | 100 | <- | Minus |
arm_X | 18008644..18008679 | 54..89 | 100 | <- | Minus |
arm_X | 18010740..18010792 | 1..53 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18113830..18114130 | 630..930 | 100 | <- | Minus |
X | 18114779..18114920 | 488..629 | 100 | <- | Minus |
X | 18114986..18115029 | 444..487 | 100 | <- | Minus |
X | 18118602..18118702 | 343..443 | 100 | <- | Minus |
X | 18121356..18121479 | 219..342 | 100 | <- | Minus |
X | 18121545..18121673 | 90..218 | 100 | <- | Minus |
X | 18122709..18122744 | 54..89 | 100 | <- | Minus |
X | 18124805..18124857 | 1..53 | 100 | Minus |
Translation from 74 to 700
> HL08042.pep MADDEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLL LRKKAAEELKKEQERKAAERRRIIEERCGSPRNLSDASEAELQTICKQYW QRVYSLEGDKFDLEHVQKVKAQEINDLNAQVNDLRGKFVKPALKKVSKYE NKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEEKEKKPDWSKGKPGDAKV KEEVEAEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19521-PA | 272 | GF19521-PA | 68..272 | 4..208 | 724 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18142-PA | 269 | GG18142-PA | 65..269 | 4..208 | 722 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11970-PA | 282 | GH11970-PA | 78..282 | 4..208 | 734 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wupA-PE | 208 | CG7178-PE | 1..208 | 1..208 | 1047 | 100 | Plus |
wupA-PD | 208 | CG7178-PD | 1..208 | 1..208 | 1047 | 100 | Plus |
wupA-PF | 208 | CG7178-PF | 1..208 | 1..208 | 952 | 91.3 | Plus |
wupA-PC | 208 | CG7178-PC | 1..208 | 1..208 | 952 | 91.3 | Plus |
wupA-PI | 199 | CG7178-PI | 1..187 | 1..187 | 934 | 100 | Plus |
wupA-PA | 208 | CG7178-PA | 1..208 | 1..208 | 933 | 90.4 | Plus |
wupA-PG | 269 | CG7178-PG | 65..269 | 4..208 | 933 | 90.7 | Plus |
wupA-PB | 208 | CG7178-PB | 1..208 | 1..208 | 927 | 88.9 | Plus |
wupA-PJ | 199 | CG7178-PJ | 1..187 | 1..187 | 820 | 89.3 | Plus |
wupA-PH | 260 | CG7178-PH | 65..248 | 4..187 | 820 | 89.7 | Plus |
wupA-PM | 184 | CG7178-PM | 1..184 | 25..208 | 818 | 89.1 | Plus |
wupA-PL | 184 | CG7178-PL | 1..184 | 25..208 | 818 | 89.1 | Plus |
wupA-PK | 184 | CG7178-PK | 1..184 | 25..208 | 818 | 89.1 | Plus |
up-PM | 373 | CG7107-PM | 83..300 | 5..196 | 156 | 27.4 | Plus |
up-PL | 388 | CG7107-PL | 98..315 | 5..196 | 156 | 28.3 | Plus |
up-PN | 394 | CG7107-PN | 104..321 | 5..196 | 156 | 28.3 | Plus |
up-PK | 396 | CG7107-PK | 106..323 | 5..196 | 156 | 28.3 | Plus |
up-PG | 396 | CG7107-PG | 106..323 | 5..196 | 156 | 28.3 | Plus |
up-PT | 306 | CG7107-PT | 15..233 | 5..196 | 155 | 28.1 | Plus |
up-PD | 306 | CG7107-PD | 15..233 | 5..196 | 155 | 28.1 | Plus |
up-PH | 374 | CG7107-PH | 83..301 | 5..196 | 155 | 27.2 | Plus |
up-PE | 374 | CG7107-PE | 83..301 | 5..196 | 155 | 28.1 | Plus |
up-PQ | 388 | CG7107-PQ | 97..315 | 5..196 | 155 | 28.1 | Plus |
up-PS | 388 | CG7107-PS | 97..315 | 5..196 | 155 | 28.1 | Plus |
up-PR | 388 | CG7107-PR | 97..315 | 5..196 | 155 | 28.1 | Plus |
up-PJ | 389 | CG7107-PJ | 98..316 | 5..196 | 155 | 27.2 | Plus |
up-PB | 389 | CG7107-PB | 98..316 | 5..196 | 155 | 28.1 | Plus |
up-PP | 396 | CG7107-PP | 105..323 | 5..196 | 155 | 28.1 | Plus |
up-PO | 397 | CG7107-PO | 106..324 | 5..196 | 155 | 28.1 | Plus |
up-PI | 397 | CG7107-PI | 106..324 | 5..196 | 155 | 27.2 | Plus |
up-PA | 397 | CG7107-PA | 106..324 | 5..196 | 155 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14711-PA | 277 | GI14711-PA | 73..277 | 4..208 | 734 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14173-PA | 267 | GL14173-PA | 63..267 | 4..208 | 1019 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\TpnI-PA | 267 | GA22383-PA | 63..267 | 4..208 | 1019 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22835-PA | 224 | GM22835-PA | 65..224 | 4..208 | 496 | 66.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24482-PA | 98 | GD24482-PA | 13..98 | 6..91 | 395 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\wupA-PA | 274 | GJ16776-PA | 70..274 | 4..208 | 734 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24919-PA | 272 | GK24919-PA | 68..272 | 4..208 | 734 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\wupA-PA | 270 | GE15552-PA | 66..270 | 4..208 | 1027 | 99.5 | Plus |
Translation from 74 to 700
> HL08042.hyp MADDEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLL LRKKAAEELKKEQERKAAERRRIIEERCGSPRNLSDASEAELQTICKQYW QRVYSLEGDKFDLEHVQKVKAQEINDLNAQVNDLRGKFVKPALKKVSKYE NKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEEKEKKPDWSKGKPGDAKV KEEVEAEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wupA-PE | 208 | CG7178-PE | 1..208 | 1..208 | 1047 | 100 | Plus |
wupA-PD | 208 | CG7178-PD | 1..208 | 1..208 | 1047 | 100 | Plus |
wupA-PF | 208 | CG7178-PF | 1..208 | 1..208 | 952 | 91.3 | Plus |
wupA-PC | 208 | CG7178-PC | 1..208 | 1..208 | 952 | 91.3 | Plus |
wupA-PI | 199 | CG7178-PI | 1..187 | 1..187 | 934 | 100 | Plus |