BDGP Sequence Production Resources |
Search the DGRC for HL08109
Library: | HL |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 81 |
Well: | 9 |
Vector: | pOT2 |
Associated Gene/Transcript | yip2-RA |
Protein status: | HL08109.pep: gold |
Preliminary Size: | 1496 |
Sequenced Size: | 1385 |
Gene | Date | Evidence |
---|---|---|
CG4600 | 2001-01-01 | Release 2 assignment |
CG4600 | 2001-11-09 | Blastp of sequenced clone |
CG4600 | 2003-01-01 | Sim4 clustering to Release 3 |
yip2 | 2008-04-29 | Release 5.5 accounting |
yip2 | 2008-08-15 | Release 5.9 accounting |
yip2 | 2008-12-18 | 5.12 accounting |
1385 bp (1385 high quality bases) assembled on 2001-11-09
GenBank Submission: AY089528
> HL08109.complete CAGTGCGATAGTCGCCTTTACTTGCATTAATTTATTTGTTGTTTTATTTA AGAGTGAACCCACCTTAGAAAATGTCTGCCGCAACCAAAGGTATCTATAT TGTGGCTGCCAAGCGTACGGCCTTCGGAACCTTCGGTGGATCCTTGAAGG GCATCAACCAGACCCAATTGCAAACCACGGCGGCCAAGGCTGCCCTGGAT GCTGCCGGTCTTAAGGGTGAGCAAGTGGACACCGTCATCGTGGGAAATGT GATCGCGTCCTCCTCCACCGATGGTATTTATGTGCCCCGTCATGTGGGTC TCAACTGCGGTGTGCCCATCGAGAAGCCCGCCCTTGGAATCAACCGGCTT TGCGGTTCCGGCTTCCAGTCGATCGTAAACGGAGCCCAGGACATCCTGGT CGGCGGTGCCAAGATAGCCCTTACCGGCGGCGTGGAGAACATGTCACAGA GCCCTTTCATTGCCCGTAATGTGAGATTCGGAACCACCTTGGGTGCCAGC TACAATCTGGAGGATGCTCTATGGGCTGGCCTCACCGATACCTACTGCAA GCTGCCCATGGCTCTGACCGCTGAGAACCTGGCCGATCAGTACAAGATCA GTAGGGAGCGTGTGGATGAGTTCTCTCTGCTCTCGCAAAAGAACTGGGAG AAGGGTCAGAAGGAGGGAGCATTCAATGCCGAGATCACACCCATCAAACT TAAGGTCAAGGGAAAGGAAGTGGACTTTGTGGTGGACGAGCACCCACGTC CCAAGACCACCATCGAGGGTCTGAACAAGCTGCCTTCGCTGTTTAAGAAG AACGGCGTTGTGACTGCCGGAACAGCATCCGGAATCTGTGATGGTGCCTC CGCAGTGATCGTGGCCTCCGAGGAGGCGCTTAAGGAGTACAACCTGAAGC CTCTGGCCCGTCTAGTGGCCTTCTCCTTTGTCGGAGTCAAGCCTGAGATC ATGGGCATTGGCCCAGTACCCGCCATTCAGAACGTCCTGAAGGTTTCCGG CAAGAAACTGGAGGATATTGATCTGATTGAGATCAACGAAGCCTTTGCTG CCCAGACATTGGCTTGCGCCGATGCCCTGAAGTTGGATACCTCCAAACTG AATGTGAACGGAGGCGCCATCGCCTTGGGCCATCCTCTGGGTGCCAGTGG CTCTCGCATCACTGGTCATCTGGTTCATGAGTTGCAGCGCAAGAAGCTAA AGTACGGCATTGGATCCGCGTGCATTGGTGGTGGTCAGGGCATCGCCCTT CTCCTCGAGGCTGTCTAATCCTACAGCTTAATGTAATAGGTGCCCTGCAT TTACACTTAAATTAGTGCTGAAAATTCCGTTTTAAAAATACCCCGATAGC AATAAAGAAATTATTTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yip2-RA | 1489 | yip2-RA | 113..1480 | 1..1368 | 6840 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 9914972..9915902 | 257..1187 | 4580 | 99.5 | Plus |
chr2L | 23010047 | chr2L | 9915961..9916141 | 1187..1367 | 875 | 98.9 | Plus |
chr2L | 23010047 | chr2L | 9914542..9914712 | 87..257 | 840 | 99.4 | Plus |
chr2L | 23010047 | chr2L | 9914198..9914290 | 1..93 | 465 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 9916051..9916981 | 257..1187 | 4655 | 100 | Plus |
2L | 23513712 | 2L | 9917040..9917221 | 1187..1368 | 910 | 100 | Plus |
2L | 23513712 | 2L | 9915621..9915791 | 87..257 | 855 | 100 | Plus |
2L | 23513712 | 2L | 9915277..9915369 | 1..93 | 465 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 9916051..9916981 | 257..1187 | 4655 | 100 | Plus |
2L | 23513712 | 2L | 9917040..9917221 | 1187..1368 | 910 | 100 | Plus |
2L | 23513712 | 2L | 9915621..9915791 | 87..257 | 855 | 100 | Plus |
2L | 23513712 | 2L | 9915277..9915369 | 1..93 | 465 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 1415..1482 | 180..249 | 128 | 68.6 | Plus |
Rt1a | 5108 | Rt1a DME278684 5108bp Derived from AJ278684 (AJ278684.1) (Rel. 64, Last updated, Version 1). | 1665..1710 | 528..573 | 113 | 71.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 9914198..9914287 | 1..90 | 100 | -> | Plus |
chr2L | 9914546..9914712 | 91..257 | 99 | -> | Plus |
chr2L | 9914973..9915901 | 258..1186 | 99 | -> | Plus |
chr2L | 9915961..9916141 | 1187..1367 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yip2-RA | 1..1197 | 72..1268 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yip2-RA | 1..1197 | 72..1268 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yip2-RA | 1..1197 | 72..1268 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yip2-RA | 1..1197 | 72..1268 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yip2-RA | 1..1197 | 72..1268 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yip2-RA | 23..1389 | 1..1367 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yip2-RA | 23..1389 | 1..1367 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yip2-RA | 25..1391 | 1..1367 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yip2-RA | 23..1389 | 1..1367 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yip2-RA | 25..1391 | 1..1367 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9915277..9915366 | 1..90 | 100 | -> | Plus |
2L | 9915625..9915791 | 91..257 | 100 | -> | Plus |
2L | 9916052..9916980 | 258..1186 | 100 | -> | Plus |
2L | 9917040..9917220 | 1187..1367 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9915277..9915366 | 1..90 | 100 | -> | Plus |
2L | 9915625..9915791 | 91..257 | 100 | -> | Plus |
2L | 9916052..9916980 | 258..1186 | 100 | -> | Plus |
2L | 9917040..9917220 | 1187..1367 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9915277..9915366 | 1..90 | 100 | -> | Plus |
2L | 9915625..9915791 | 91..257 | 100 | -> | Plus |
2L | 9916052..9916980 | 258..1186 | 100 | -> | Plus |
2L | 9917040..9917220 | 1187..1367 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 9915277..9915366 | 1..90 | 100 | -> | Plus |
arm_2L | 9915625..9915791 | 91..257 | 100 | -> | Plus |
arm_2L | 9916052..9916980 | 258..1186 | 100 | -> | Plus |
arm_2L | 9917040..9917220 | 1187..1367 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9916052..9916980 | 258..1186 | 100 | -> | Plus |
2L | 9917040..9917220 | 1187..1367 | 100 | Plus | |
2L | 9915277..9915366 | 1..90 | 100 | -> | Plus |
2L | 9915625..9915791 | 91..257 | 100 | -> | Plus |
Translation from 71 to 1267
> HL08109.hyp MSAATKGIYIVAAKRTAFGTFGGSLKGINQTQLQTTAAKAALDAAGLKGE QVDTVIVGNVIASSSTDGIYVPRHVGLNCGVPIEKPALGINRLCGSGFQS IVNGAQDILVGGAKIALTGGVENMSQSPFIARNVRFGTTLGASYNLEDAL WAGLTDTYCKLPMALTAENLADQYKISRERVDEFSLLSQKNWEKGQKEGA FNAEITPIKLKVKGKEVDFVVDEHPRPKTTIEGLNKLPSLFKKNGVVTAG TASGICDGASAVIVASEEALKEYNLKPLARLVAFSFVGVKPEIMGIGPVP AIQNVLKVSGKKLEDIDLIEINEAFAAQTLACADALKLDTSKLNVNGGAI ALGHPLGASGSRITGHLVHELQRKKLKYGIGSACIGGGQGIALLLEAV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yip2-PA | 398 | CG4600-PA | 1..398 | 1..398 | 2005 | 100 | Plus |
CG9149-PA | 392 | CG9149-PA | 4..389 | 8..396 | 820 | 43.4 | Plus |
CG10932-PB | 410 | CG10932-PB | 25..408 | 8..396 | 613 | 35.5 | Plus |
CG10932-PA | 410 | CG10932-PA | 25..408 | 8..396 | 613 | 35.5 | Plus |
Thiolase-PA | 469 | CG4581-PA | 41..461 | 5..396 | 400 | 32.1 | Plus |
Translation from 71 to 1267
> HL08109.pep MSAATKGIYIVAAKRTAFGTFGGSLKGINQTQLQTTAAKAALDAAGLKGE QVDTVIVGNVIASSSTDGIYVPRHVGLNCGVPIEKPALGINRLCGSGFQS IVNGAQDILVGGAKIALTGGVENMSQSPFIARNVRFGTTLGASYNLEDAL WAGLTDTYCKLPMALTAENLADQYKISRERVDEFSLLSQKNWEKGQKEGA FNAEITPIKLKVKGKEVDFVVDEHPRPKTTIEGLNKLPSLFKKNGVVTAG TASGICDGASAVIVASEEALKEYNLKPLARLVAFSFVGVKPEIMGIGPVP AIQNVLKVSGKKLEDIDLIEINEAFAAQTLACADALKLDTSKLNVNGGAI ALGHPLGASGSRITGHLVHELQRKKLKYGIGSACIGGGQGIALLLEAV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15724-PA | 398 | GF15724-PA | 1..398 | 1..398 | 2038 | 98 | Plus |
Dana\GF24451-PA | 392 | GF24451-PA | 4..391 | 8..398 | 800 | 43.7 | Plus |
Dana\GF21242-PA | 414 | GF21242-PA | 29..412 | 8..396 | 602 | 36.8 | Plus |
Dana\GF12060-PA | 470 | GF12060-PA | 43..462 | 6..396 | 418 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10063-PA | 398 | GG10063-PA | 1..398 | 1..398 | 2042 | 98.2 | Plus |
Dere\GG14778-PA | 392 | GG14778-PA | 4..391 | 8..398 | 831 | 43.2 | Plus |
Dere\GG17603-PA | 410 | GG17603-PA | 25..408 | 8..396 | 611 | 35.8 | Plus |
Dere\GG19986-PA | 469 | GG19986-PA | 42..461 | 6..396 | 415 | 32.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11301-PA | 398 | GH11301-PA | 1..398 | 1..398 | 1901 | 92.2 | Plus |
Dgri\GH15449-PA | 392 | GH15449-PA | 4..391 | 8..398 | 806 | 43.5 | Plus |
Dgri\GH17897-PA | 409 | GH17897-PA | 18..407 | 2..396 | 629 | 36.5 | Plus |
Dgri\GH20195-PA | 405 | GH20195-PA | 14..397 | 42..396 | 389 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yip2-PA | 398 | CG4600-PA | 1..398 | 1..398 | 2005 | 100 | Plus |
CG9149-PA | 392 | CG9149-PA | 4..389 | 8..396 | 820 | 43.4 | Plus |
CG10932-PB | 410 | CG10932-PB | 25..408 | 8..396 | 613 | 35.5 | Plus |
CG10932-PA | 410 | CG10932-PA | 25..408 | 8..396 | 613 | 35.5 | Plus |
Thiolase-PA | 469 | CG4581-PA | 41..461 | 5..396 | 400 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17721-PA | 398 | GI17721-PA | 1..398 | 1..398 | 1946 | 95 | Plus |
Dmoj\GI13050-PA | 392 | GI13050-PA | 4..391 | 8..398 | 828 | 44.5 | Plus |
Dmoj\GI15420-PA | 408 | GI15420-PA | 17..406 | 2..396 | 623 | 35.5 | Plus |
Dmoj\GI20722-PA | 469 | GI20722-PA | 38..461 | 2..396 | 435 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18942-PA | 398 | GL18942-PA | 1..398 | 1..398 | 2008 | 96.2 | Plus |
Dper\GL16175-PA | 392 | GL16175-PA | 4..391 | 8..398 | 793 | 42.5 | Plus |
Dper\GL14584-PA | 412 | GL14584-PA | 21..410 | 2..396 | 621 | 36.6 | Plus |
Dper\GL10924-PA | 471 | GL10924-PA | 43..463 | 5..396 | 421 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18290-PA | 398 | GA18290-PA | 1..398 | 1..398 | 2008 | 96.2 | Plus |
Dpse\GA21576-PA | 392 | GA21576-PA | 4..391 | 8..398 | 798 | 43 | Plus |
Dpse\GA10651-PA | 412 | GA10651-PA | 21..410 | 2..396 | 623 | 36.6 | Plus |
Dpse\GA18273-PA | 471 | GA18273-PA | 43..463 | 5..396 | 421 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17755-PA | 398 | GM17755-PA | 1..398 | 1..398 | 2050 | 98.7 | Plus |
Dsec\GM14397-PA | 392 | GM14397-PA | 4..389 | 8..396 | 828 | 43.7 | Plus |
Dsec\GM11967-PA | 410 | GM11967-PA | 25..408 | 8..396 | 611 | 35.8 | Plus |
Dsec\GM12955-PA | 311 | GM12955-PA | 4..304 | 8..311 | 572 | 39.1 | Plus |
Dsec\GM15500-PA | 469 | GM15500-PA | 42..461 | 6..396 | 412 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23636-PA | 397 | GD23636-PA | 1..397 | 1..398 | 1923 | 94.5 | Plus |
Dsim\GD13606-PA | 392 | GD13606-PA | 4..389 | 8..396 | 829 | 43.7 | Plus |
Dsim\GD24579-PA | 410 | GD24579-PA | 25..408 | 8..396 | 611 | 35.8 | Plus |
Dsim\GD25003-PA | 469 | GD25003-PA | 42..461 | 6..396 | 412 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17549-PA | 398 | GJ17549-PA | 1..398 | 1..398 | 1958 | 96 | Plus |
Dvir\GJ12146-PA | 392 | GJ12146-PA | 4..391 | 8..398 | 816 | 43 | Plus |
Dvir\GJ16378-PA | 408 | GJ16378-PA | 17..406 | 2..396 | 614 | 36.3 | Plus |
Dvir\GJ20459-PA | 443 | GJ20459-PA | 12..435 | 2..396 | 419 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18280-PA | 398 | GK18280-PA | 1..398 | 1..398 | 2012 | 96 | Plus |
Dwil\GK20386-PA | 392 | GK20386-PA | 4..391 | 8..398 | 798 | 42.7 | Plus |
Dwil\GK10115-PA | 413 | GK10115-PA | 22..411 | 2..396 | 612 | 36.9 | Plus |
Dwil\GK15863-PA | 473 | GK15863-PA | 46..465 | 6..396 | 432 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\yip2-PA | 398 | GE18877-PA | 1..398 | 1..398 | 2049 | 98.7 | Plus |
Dyak\GE21141-PA | 392 | GE21141-PA | 4..389 | 8..396 | 809 | 42.7 | Plus |
Dyak\GE17503-PA | 410 | GE17503-PA | 25..408 | 8..396 | 615 | 36.1 | Plus |
Dyak\GE11519-PA | 469 | GE11519-PA | 42..461 | 6..396 | 413 | 32.4 | Plus |