BDGP Sequence Production Resources |
Search the DGRC for HL08141
Library: | HL |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 81 |
Well: | 41 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9578-RA |
Protein status: | HL08141.pep: gold |
Preliminary Size: | 4600 |
Sequenced Size: | 1046 |
Gene | Date | Evidence |
---|---|---|
CG9578 | 2001-01-01 | Release 2 assignment |
CG9578 | 2001-09-19 | Blastp of sequenced clone |
CG9578 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9578 | 2008-04-29 | Release 5.5 accounting |
CG9578 | 2008-08-15 | Release 5.9 accounting |
CG9578 | 2008-12-18 | 5.12 accounting |
1046 bp (1046 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058495
> HL08141.complete TTTGGAACAGTATTTTCGACTTAGACAGACACTTTGAAATCATTTGACAT ATCTTTAGAATGTCCATGGAGGAGTGCTTTGTGCCCCGGCTGCCGGTGGA CAGCGAGTTCATCCAGTTCCACGACTGGGCCATCAAGTATGAGAAGTCGC ACATCCTGAAGAGCAGCTGCCAACTGGGCACCGCCAAGTGCTGTCCCAAG GACTCGGCCGACCGCTGCGACCTCTGCCACTACCAGCACTCCCTGCAGCT GCCCCACCTGCCCGACATGGTGTTCCACAAGAATCGGCTGGTGTTACAGC ACAAGGACGGCGCCACTCTCGAGTTCTGCCCCATGGACGCGCTGGCGCTG GTGGACAATGGGAAGCAGCCGCTGGAGGTCGCTTGTGCTCAGGAGTGGCG GGAAACGCGTAACGAGCAGACAATGGAGGAGAAGTTCAAGCCTTTCGACT GGACATTCACCTCCACCTACCAGGGCACCATGAACGAAAAAGTGCGATCG GAGACCACGAATCAGACGCTGAACAAGTTCAAGCTGATGCAGCGCGAGAA CATCATCTTCTACCACGATTTAACTCTGTTCGAGGATGAGCTGCACGACC ACGGAATATCGGTGATGAGCGTGCGAATCCGCGTGATGCCCTCTGGCTTC TTCATCCTTTTGCGCCACTTTCTGCGCGTGGACCACGTGCTAATCCGGAT GCACGACACCCGCTTCCACCACGAGATCGAGAACGACTTTATCCTGAAAG AGTACATCCATCGGGAGGCGCCTTGCACTGAGCTTCAAAACTGTGTGGCC TTCTGGACCAACCCGGATGAAATGCAAGAATTTGTGCCCGTGAAGTCCAA GCAGTTGCACAAGCTCTTCTTTAAGTAGTCCCGATGTCCGATGCTAGATG CCAGATCCCAGATCTCTAGGTTTATGTCAGTCGTCGCATTGGTTACAACT GCTGCTATATGCGTTTATTTATTGCCAACAGTGTGCGCATGCGCAGACGA CATTAAAAGCGATTTTCCTAAAAGGCAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 20059678..20060074 | 630..1026 | 1985 | 100 | Plus |
chrX | 22417052 | chrX | 20058970..20059306 | 73..409 | 1685 | 100 | Plus |
chrX | 22417052 | chrX | 20059393..20059613 | 409..629 | 1105 | 100 | Plus |
chrX | 22417052 | chrX | 20058838..20058911 | 1..74 | 370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 20171130..20171527 | 630..1027 | 1990 | 100 | Plus |
X | 23542271 | X | 20170422..20170758 | 73..409 | 1685 | 100 | Plus |
X | 23542271 | X | 20170845..20171065 | 409..629 | 1105 | 100 | Plus |
X | 23542271 | X | 20170290..20170363 | 1..74 | 370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 20179228..20179625 | 630..1027 | 1990 | 100 | Plus |
X | 23527363 | X | 20178520..20178856 | 73..409 | 1685 | 100 | Plus |
X | 23527363 | X | 20178943..20179163 | 409..629 | 1105 | 100 | Plus |
X | 23527363 | X | 20178388..20178461 | 1..74 | 370 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20058838..20058911 | 1..74 | 100 | -> | Plus |
chrX | 20058972..20059306 | 75..409 | 100 | -> | Plus |
chrX | 20059394..20059613 | 410..629 | 100 | -> | Plus |
chrX | 20059678..20060074 | 630..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9578-RA | 1..819 | 60..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9578-RA | 1..819 | 60..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9578-RA | 1..819 | 60..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9578-RA | 1..819 | 60..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9578-RA | 1..819 | 60..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9578-RA | 49..1074 | 1..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9578-RA | 76..1101 | 1..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9578-RA | 69..1094 | 1..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9578-RA | 49..1074 | 1..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9578-RA | 69..1094 | 1..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20170290..20170363 | 1..74 | 100 | -> | Plus |
X | 20170424..20170758 | 75..409 | 100 | -> | Plus |
X | 20170846..20171065 | 410..629 | 100 | -> | Plus |
X | 20171130..20171526 | 630..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20170290..20170363 | 1..74 | 100 | -> | Plus |
X | 20170424..20170758 | 75..409 | 100 | -> | Plus |
X | 20170846..20171065 | 410..629 | 100 | -> | Plus |
X | 20171130..20171526 | 630..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20170290..20170363 | 1..74 | 100 | -> | Plus |
X | 20170424..20170758 | 75..409 | 100 | -> | Plus |
X | 20170846..20171065 | 410..629 | 100 | -> | Plus |
X | 20171130..20171526 | 630..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20064323..20064396 | 1..74 | 100 | -> | Plus |
arm_X | 20064457..20064791 | 75..409 | 100 | -> | Plus |
arm_X | 20064879..20065098 | 410..629 | 100 | -> | Plus |
arm_X | 20065163..20065559 | 630..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20178388..20178461 | 1..74 | 100 | -> | Plus |
X | 20178522..20178856 | 75..409 | 100 | -> | Plus |
X | 20178944..20179163 | 410..629 | 100 | -> | Plus |
X | 20179228..20179624 | 630..1026 | 100 | Plus |
Translation from 59 to 877
> HL08141.pep MSMEECFVPRLPVDSEFIQFHDWAIKYEKSHILKSSCQLGTAKCCPKDSA DRCDLCHYQHSLQLPHLPDMVFHKNRLVLQHKDGATLEFCPMDALALVDN GKQPLEVACAQEWRETRNEQTMEEKFKPFDWTFTSTYQGTMNEKVRSETT NQTLNKFKLMQRENIIFYHDLTLFEDELHDHGISVMSVRIRVMPSGFFIL LRHFLRVDHVLIRMHDTRFHHEIENDFILKEYIHREAPCTELQNCVAFWT NPDEMQEFVPVKSKQLHKLFFK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20238-PA | 271 | GF20238-PA | 4..271 | 5..272 | 1290 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19274-PA | 271 | GG19274-PA | 4..271 | 5..272 | 1348 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12616-PA | 274 | GH12616-PA | 4..274 | 5..272 | 1135 | 76.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9578-PA | 272 | CG9578-PA | 1..272 | 1..272 | 1486 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11031-PA | 272 | GI11031-PA | 4..272 | 5..272 | 1166 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13081-PA | 272 | GL13081-PA | 1..271 | 1..271 | 1223 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21888-PA | 272 | GA21888-PA | 5..271 | 5..271 | 1224 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23013-PA | 284 | GM23013-PA | 1..284 | 1..272 | 1218 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15812-PA | 272 | GJ15812-PA | 4..272 | 5..272 | 1192 | 80.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25338-PA | 271 | GK25338-PA | 3..271 | 4..272 | 1244 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15892-PA | 271 | GE15892-PA | 4..271 | 5..272 | 1341 | 92.5 | Plus |
Translation from 59 to 877
> HL08141.hyp MSMEECFVPRLPVDSEFIQFHDWAIKYEKSHILKSSCQLGTAKCCPKDSA DRCDLCHYQHSLQLPHLPDMVFHKNRLVLQHKDGATLEFCPMDALALVDN GKQPLEVACAQEWRETRNEQTMEEKFKPFDWTFTSTYQGTMNEKVRSETT NQTLNKFKLMQRENIIFYHDLTLFEDELHDHGISVMSVRIRVMPSGFFIL LRHFLRVDHVLIRMHDTRFHHEIENDFILKEYIHREAPCTELQNCVAFWT NPDEMQEFVPVKSKQLHKLFFK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9578-PA | 272 | CG9578-PA | 1..272 | 1..272 | 1486 | 100 | Plus |