BDGP Sequence Production Resources |
Search the DGRC for HL08191
Library: | HL |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1997-11-24 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 81 |
Well: | 91 |
Vector: | pOT2 |
Associated Gene/Transcript | Cchl-RA |
Protein status: | HL08191.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1187 |
Gene | Date | Evidence |
---|---|---|
CG6022 | 2001-01-01 | Release 2 assignment |
CG6022 | 2002-05-16 | Blastp of sequenced clone |
CG6022 | 2003-01-01 | Sim4 clustering to Release 3 |
Cchl | 2008-04-29 | Release 5.5 accounting |
Cchl | 2008-08-15 | Release 5.9 accounting |
Cchl | 2008-12-18 | 5.12 accounting |
1187 bp (1187 high quality bases) assembled on 2002-05-16
GenBank Submission: AY118889
> HL08191.complete CCTGACCACAACCTCGCTGCATTTTGGGCTCAAAAGTTCTAACGATGAAC TAACGAAAATATAAATCAAAATTTAAGGCGAAAGGCTCCAGGAGAAGATC GACAAATATCGAGAGTTGTGACCATTAGGATCGAATTTTGTTATTAACCA ATCCCCAGCAGAAATGGGCAATACAGCCATCACCCGAGTGCAAATGGAGG CCACGAAGAGTGTGCCGGTGGACCACGCCAAGTACATGAGCGGCAGTGGT GCCCCGCCACCAGAATGCCCCATGCATCAGAAGCATGGAGATGCAAAATC GGCCTCCGCCGTACCCCCACATCCCAAGATGCAGGCCGCTTCCGAATGTC CGGTGCAGCACGACAACAGCGACGTTAATCCGCTGAATATGATGCCACCG GCAAACCAACAGCCGGCGGCAGATCAGCCCTTTCCACTGCCCACCGACCG CCAGACGTCGACCATTCCCAAAGTCACCGAGGATGGCAGCGTTCAATTCT GGCAGTATCCCAGCCAACAGATGTTCTGGAACGCCATGCTACGCAAGGGC TGGCGCTGGAAGACCGAGGACGTATCGCAAAAGGACATGGGCGACATCAT ACGCATCCACAATGCCAACAACGAGCAGGCCTGGCAGGAGGTACTTAAGT GGGAGGCGCTTCACGCCAAGGAATGCGGCAATCCGCGCCTCAAGAGTTTC GGTGGCAAGGCCAAGGACTTCAGTCCGCGCGCTCGATTCCGCAGCTGGCT GGGATACGAGCTGCCATTCGATAGGCATGACTGGATAGTCGATCGCTGCG GCAAGGATGTGCGCTACGTCATCGACTACTACGACGGTGGACTGGTGGAC AAAGACTACCGCTTTGCCCTGCTGGATGTGCGCCCAGCCATGGACTCCGT GGACAACGTTTGGGACAGAATGCGCGTAGCTTACATGCGCTGGAAGTACG AGCTGTTTGAGAAGTTTGGCAGCGCGGATGGCGGCAAAGTGACCGCTGGT AGCGACTAGATGGAATGCATATTTAGATGATCGCTATAGGTACAAAATCG GCTTAAGTTATCGAATGGATGGAAGAGGGAGTTTGGTTAAATGCGTTTAA GACGCTGCGAAGCGAAACGATGTTGAGCCCTCTCTTTAAATAAATGTTGA ATCTTGACTTCTGAACACCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cchl-RA | 1446 | Cchl-RA | 184..1356 | 1..1173 | 5865 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 17850211..17850829 | 753..135 | 3050 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 17849738..17850154 | 1169..753 | 2025 | 99 | Minus |
chr3R | 27901430 | chr3R | 17850923..17851056 | 134..1 | 670 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 22026448..22027066 | 753..135 | 3095 | 100 | Minus |
3R | 32079331 | 3R | 22025971..22026391 | 1173..753 | 2105 | 100 | Minus |
3R | 32079331 | 3R | 22027160..22027293 | 134..1 | 670 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 21767279..21767897 | 753..135 | 3095 | 100 | Minus |
3R | 31820162 | 3R | 21766802..21767222 | 1173..753 | 2105 | 100 | Minus |
3R | 31820162 | 3R | 21767991..21768124 | 134..1 | 670 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 17849738..17850153 | 754..1169 | 99 | <- | Minus |
chr3R | 17850211..17850829 | 135..753 | 99 | <- | Minus |
chr3R | 17850923..17851056 | 1..134 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cchl-RA | 1..846 | 164..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cchl-RA | 1..846 | 164..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cchl-RA | 1..846 | 164..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cchl-RA | 1..846 | 164..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cchl-RA | 1..846 | 164..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cchl-RA | 184..1352 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cchl-RA | 184..1352 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cchl-RA | 188..1356 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cchl-RA | 184..1352 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cchl-RA | 188..1356 | 1..1169 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22025975..22026390 | 754..1169 | 100 | <- | Minus |
3R | 22026448..22027066 | 135..753 | 100 | <- | Minus |
3R | 22027160..22027293 | 1..134 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22025975..22026390 | 754..1169 | 100 | <- | Minus |
3R | 22026448..22027066 | 135..753 | 100 | <- | Minus |
3R | 22027160..22027293 | 1..134 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22025975..22026390 | 754..1169 | 100 | <- | Minus |
3R | 22026448..22027066 | 135..753 | 100 | <- | Minus |
3R | 22027160..22027293 | 1..134 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 17851697..17852112 | 754..1169 | 100 | <- | Minus |
arm_3R | 17852170..17852788 | 135..753 | 100 | <- | Minus |
arm_3R | 17852882..17853015 | 1..134 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21766806..21767221 | 754..1169 | 100 | <- | Minus |
3R | 21767279..21767897 | 135..753 | 100 | <- | Minus |
3R | 21767991..21768124 | 1..134 | 100 | Minus |
Translation from 163 to 1008
> HL08191.pep MGNTAITRVQMEATKSVPVDHAKYMSGSGAPPPECPMHQKHGDAKSASAV PPHPKMQAASECPVQHDNSDVNPLNMMPPANQQPAADQPFPLPTDRQTST IPKVTEDGSVQFWQYPSQQMFWNAMLRKGWRWKTEDVSQKDMGDIIRIHN ANNEQAWQEVLKWEALHAKECGNPRLKSFGGKAKDFSPRARFRSWLGYEL PFDRHDWIVDRCGKDVRYVIDYYDGGLVDKDYRFALLDVRPAMDSVDNVW DRMRVAYMRWKYELFEKFGSADGGKVTAGSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16950-PA | 278 | GF16950-PA | 1..278 | 1..281 | 1370 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12543-PA | 281 | GG12543-PA | 1..281 | 1..281 | 1484 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19837-PA | 281 | GH19837-PA | 1..281 | 1..281 | 1315 | 85.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cchl-PB | 281 | CG6022-PB | 1..281 | 1..281 | 1552 | 100 | Plus |
Cchl-PA | 281 | CG6022-PA | 1..281 | 1..281 | 1552 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22295-PA | 282 | GI22295-PA | 1..282 | 1..281 | 1359 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23514-PA | 283 | GL23514-PA | 1..281 | 1..278 | 1319 | 87.9 | Plus |
Dper\GL23867-PA | 177 | GL23867-PA | 42..177 | 128..272 | 460 | 60.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19303-PA | 283 | GA19303-PA | 1..281 | 1..278 | 1319 | 87.9 | Plus |
Dpse\GA27084-PA | 177 | GA27084-PA | 42..177 | 128..272 | 448 | 58.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23672-PA | 281 | GM23672-PA | 1..281 | 1..281 | 1506 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18482-PA | 281 | GD18482-PA | 1..281 | 1..281 | 1506 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24087-PA | 272 | GJ24087-PA | 1..272 | 1..281 | 1330 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13004-PA | 280 | GK13004-PA | 1..280 | 1..281 | 1371 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24063-PA | 281 | GE24063-PA | 1..281 | 1..281 | 1490 | 97.9 | Plus |
Translation from 163 to 1008
> HL08191.hyp MGNTAITRVQMEATKSVPVDHAKYMSGSGAPPPECPMHQKHGDAKSASAV PPHPKMQAASECPVQHDNSDVNPLNMMPPANQQPAADQPFPLPTDRQTST IPKVTEDGSVQFWQYPSQQMFWNAMLRKGWRWKTEDVSQKDMGDIIRIHN ANNEQAWQEVLKWEALHAKECGNPRLKSFGGKAKDFSPRARFRSWLGYEL PFDRHDWIVDRCGKDVRYVIDYYDGGLVDKDYRFALLDVRPAMDSVDNVW DRMRVAYMRWKYELFEKFGSADGGKVTAGSD*