BDGP Sequence Production Resources |
Search the DGRC for IP01012
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 10 |
Well: | 12 |
Vector: | pOT2 |
Associated Gene/Transcript | nau-RB |
Protein status: | IP01012.pep: gold |
Preliminary Size: | 1534 |
Sequenced Size: | 1450 |
Gene | Date | Evidence |
---|---|---|
CG10250 | 2005-01-01 | Successful iPCR screen |
nau | 2008-04-29 | Release 5.5 accounting |
nau | 2008-08-15 | Release 5.9 accounting |
nau | 2008-12-18 | 5.12 accounting |
1450 bp (1450 high quality bases) assembled on 2006-03-09
GenBank Submission: BT022208
> IP01012.complete AAGGCGGTACACACACTCGCGTACGGTCCGCAAATCGAAGTCGAAAAATA TTTTTGAAAATGTCGGAGGTTTTTACAAAGCATCATTAAAGTGTAACCAA CTAATTAAGGTTCTATTTTAAAAATCCCGAAAGTGAAACTATAACAAATT AAATTAAATAGAAACCACAGCCTAAAACTTGTGTGTAACCATAACTCATA AATTTGTGTTAATGACCTAGCATACCTAGAAAAAGAGCTTAAACCACGTT AAAAATGGTAATAATCAACTGACTAAATTAACTGTGCCATCGTAATTAGT ATCAGCAATTAAATTCAGCAACTTGTTGAACTACCAAAATTGTTTTGTAA AATATAACAAAATCGTAGTGAAGTGAAAAATGACCAAGTATAATAGTGGC AGCAGTGAAATGCCTGCGGCTCAAACCATCAAGCAGGAGTACCACAATGG CTATGGTCAGCCGACACATCCTGGATACGGATTTAGCGCCTATAGCCAAC AGAATCCGATAGCCCATCCCGGCCAGAATCCACACCAGACACTGCAGAAT TTCTTTAGCCGCTTCAATGCCGTCGGTGATGCGAGTGCGGGAAATGGTGG AGCGGCTTCCATCTCAGCCAACGGATCGGGTTCGTCTTGCAACTACAGTC ATGCGAATCATAATCCGGTTGAGCTGGACAAGCCATTGGGCATGAATATG ACACCGTCGCCCATCTACACCACCGACTACGATGACGAGAACAGCAGTCT CAGCTCCGAGGAGCACGTCCTGGCGCCCCTCGTCTGCTCCTCCGCCCAAT CCTCCAGACCATGCCTCACCTGGGCCTGCAAGGCGTGCAAAAAGAAGAGC GTCACCGTGGACCGTCGGAAAGCGGCCACTATGAGGGAACGCCGGAGACT GCGAAAGGTTAACGAGGCCTTCGAGATCCTCAAGCGACGCACTTCATCCA ATCCCAACCAGCGCCTGCCGAAGGTTGAGATATTGCGCAATGCCATCGAG TATATCGAGAGCCTGGAGGATCTGCTACAGGAATCCAGTACCACACGCGA TGGCGACAACCTGGCGCCCAGTTTGAGCGGCAAAAGCTGCCAGTCCGATT ATCTGAGCTCCTATGCTGGCGCTTATCTAGAAGATAAACTTAGTTTTTAC AACAAACATATGGAGAAATATGACTTTGATGGCAATGCCAATGGCTCCAG TTTGGACTGTCTAAATCTGATTGTTCAGAGCATCAATAAGAGCACCACGA GTCCCATTCAAAATAAGGCCACGCCCTCCGCTTCAGATACCCAATCGCCG CCCTCATCCGGAGCAACTGCACCCACTTCTCTGCACGTGAACTTCAAACG GAAGTGCAGCACTTAGCACTTAAGTATCAGCACCTTAGGCAATTGTAAAG CTATTTTTAAGAGGATACACGAGATACCCAGTGACCCGAATAGGCCTTAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nau-RB | 1520 | nau-RB | 23..1472 | 1..1450 | 7250 | 100 | Plus |
nau-RA | 1532 | nau-RA | 23..1194 | 1..1172 | 5860 | 100 | Plus |
nau-RA | 1532 | nau-RA | 1206..1484 | 1172..1450 | 1395 | 100 | Plus |
CG10300-RA | 1533 | CG10300-RA | 1068..1346 | 1450..1172 | 1395 | 100 | Minus |
CG10300-RA | 1533 | CG10300-RA | 1414..1481 | 1172..1105 | 340 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19540846..19541754 | 909..1 | 4410 | 99 | Minus |
chr3R | 27901430 | chr3R | 19536268..19536544 | 1448..1172 | 1385 | 100 | Minus |
chr3R | 27901430 | chr3R | 19539923..19540048 | 1031..906 | 630 | 100 | Minus |
chr3R | 27901430 | chr3R | 19539771..19539847 | 1105..1029 | 370 | 98.7 | Minus |
chr3R | 27901430 | chr3R | 19536612..19536679 | 1172..1105 | 340 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 23717427..23718335 | 909..1 | 4545 | 100 | Minus |
3R | 32079331 | 3R | 23712862..23713140 | 1450..1172 | 1395 | 100 | Minus |
3R | 32079331 | 3R | 23716500..23716625 | 1031..906 | 630 | 100 | Minus |
3R | 32079331 | 3R | 23716363..23716439 | 1105..1029 | 385 | 100 | Minus |
3R | 32079331 | 3R | 23713208..23713275 | 1172..1105 | 340 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 23458258..23459166 | 909..1 | 4545 | 100 | Minus |
3R | 31820162 | 3R | 23453693..23453971 | 1450..1172 | 1395 | 100 | Minus |
3R | 31820162 | 3R | 23457331..23457456 | 1031..906 | 630 | 100 | Minus |
3R | 31820162 | 3R | 23457194..23457270 | 1105..1029 | 385 | 100 | Minus |
3R | 31820162 | 3R | 23454039..23454106 | 1172..1105 | 340 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dkoe\Gandalf | 979 | Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). | 738..828 | 164..75 | 119 | 60.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19536266..19536543 | 1173..1450 | 100 | <- | Minus |
chr3R | 19536612..19536678 | 1106..1172 | 100 | <- | Minus |
chr3R | 19539771..19539845 | 1031..1105 | 98 | <- | Minus |
chr3R | 19539924..19540046 | 908..1030 | 100 | <- | Minus |
chr3R | 19540848..19541754 | 1..907 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nau-RA | 1..999 | 380..1366 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nau-RB | 1..987 | 380..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nau-RB | 1..987 | 380..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nau-RA | 1..999 | 380..1366 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nau-RB | 1..987 | 380..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nau-RA | 23..1482 | 1..1448 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nau-RB | 23..1470 | 1..1448 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nau-RB | 23..1472 | 1..1450 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nau-RA | 23..1482 | 1..1448 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nau-RB | 23..1472 | 1..1450 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23712862..23713139 | 1173..1450 | 100 | <- | Minus |
3R | 23713208..23713274 | 1106..1172 | 100 | <- | Minus |
3R | 23716363..23716437 | 1031..1105 | 100 | <- | Minus |
3R | 23716501..23716623 | 908..1030 | 100 | <- | Minus |
3R | 23717429..23718335 | 1..907 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23712862..23713139 | 1173..1450 | 100 | <- | Minus |
3R | 23713208..23713274 | 1106..1172 | 100 | <- | Minus |
3R | 23716363..23716437 | 1031..1105 | 100 | <- | Minus |
3R | 23716501..23716623 | 908..1030 | 100 | <- | Minus |
3R | 23717429..23718335 | 1..907 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23712862..23713139 | 1173..1450 | 100 | <- | Minus |
3R | 23713208..23713274 | 1106..1172 | 100 | <- | Minus |
3R | 23716363..23716437 | 1031..1105 | 100 | <- | Minus |
3R | 23716501..23716623 | 908..1030 | 100 | <- | Minus |
3R | 23717429..23718335 | 1..907 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19538584..19538861 | 1173..1450 | 100 | <- | Minus |
arm_3R | 19538930..19538996 | 1106..1172 | 100 | <- | Minus |
arm_3R | 19542085..19542159 | 1031..1105 | 100 | <- | Minus |
arm_3R | 19542223..19542345 | 908..1030 | 100 | <- | Minus |
arm_3R | 19543151..19544057 | 1..907 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23453693..23453970 | 1173..1450 | 100 | <- | Minus |
3R | 23454039..23454105 | 1106..1172 | 100 | <- | Minus |
3R | 23457194..23457268 | 1031..1105 | 100 | <- | Minus |
3R | 23457332..23457454 | 908..1030 | 100 | <- | Minus |
3R | 23458260..23459166 | 1..907 | 100 | Minus |
Translation from 379 to 1365
> IP01012.hyp MTKYNSGSSEMPAAQTIKQEYHNGYGQPTHPGYGFSAYSQQNPIAHPGQN PHQTLQNFFSRFNAVGDASAGNGGAASISANGSGSSCNYSHANHNPVELD KPLGMNMTPSPIYTTDYDDENSSLSSEEHVLAPLVCSSAQSSRPCLTWAC KACKKKSVTVDRRKAATMRERRRLRKVNEAFEILKRRTSSNPNQRLPKVE ILRNAIEYIESLEDLLQESSTTRDGDNLAPSLSGKSCQSDYLSSYAGAYL EDKLSFYNKHMEKYDFDGNANGSSLDCLNLIVQSINKSTTSPIQNKATPS ASDTQSPPSSGATAPTSLHVNFKRKCST*
Translation from 379 to 1365
> IP01012.pep MTKYNSGSSEMPAAQTIKQEYHNGYGQPTHPGYGFSAYSQQNPIAHPGQN PHQTLQNFFSRFNAVGDASAGNGGAASISANGSGSSCNYSHANHNPVELD KPLGMNMTPSPIYTTDYDDENSSLSSEEHVLAPLVCSSAQSSRPCLTWAC KACKKKSVTVDRRKAATMRERRRLRKVNEAFEILKRRTSSNPNQRLPKVE ILRNAIEYIESLEDLLQESSTTRDGDNLAPSLSGKSCQSDYLSSYAGAYL EDKLSFYNKHMEKYDFDGNANGSSLDCLNLIVQSINKSTTSPIQNKATPS ASDTQSPPSSGATAPTSLHVNFKRKCST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18746-PA | 334 | GF18746-PA | 1..334 | 1..328 | 1413 | 81.9 | Plus |
Dana\GF18422-PA | 269 | GF18422-PA | 129..269 | 96..248 | 154 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12413-PA | 332 | GG12413-PA | 1..332 | 1..328 | 1585 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13904-PA | 335 | GH13904-PA | 1..335 | 1..328 | 1060 | 64.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nau-PB | 328 | CG10250-PB | 1..328 | 1..328 | 1722 | 100 | Plus |
nau-PA | 332 | CG10250-PA | 1..332 | 1..328 | 1707 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24830-PA | 345 | GI24830-PA | 1..345 | 1..328 | 1084 | 64.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13832-PA | 330 | GL13832-PA | 1..330 | 1..328 | 1245 | 77.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10192-PA | 330 | GA10192-PA | 1..330 | 1..328 | 1297 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23547-PA | 332 | GM23547-PA | 1..332 | 1..328 | 1602 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18361-PA | 332 | GD18361-PA | 1..332 | 1..328 | 1609 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24474-PA | 324 | GJ24474-PA | 1..324 | 1..328 | 1109 | 69.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22777-PA | 337 | GK22777-PA | 1..337 | 1..328 | 1015 | 63.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23932-PA | 332 | GE23932-PA | 1..332 | 1..328 | 1561 | 91.3 | Plus |