BDGP Sequence Production Resources |
Search the DGRC for IP01047
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 10 |
Well: | 47 |
Vector: | pOT2 |
Associated Gene/Transcript | sv-RD |
Protein status: | IP01047.pep: validated not full length |
Preliminary Size: | 4677 |
Sequenced Size: | 920 |
Gene | Date | Evidence |
---|---|---|
CG11049 | 2005-01-01 | Successful iPCR screen |
sv | 2008-04-29 | Release 5.5 accounting |
sv | 2008-04-29 | Picked prior to 5.5 |
sv | 2008-08-15 | Release 5.9 accounting |
sv | 2008-12-18 | 5.12 accounting |
920 bp (920 high quality bases) assembled on 2005-08-25
GenBank Submission: BT022204
> IP01047.complete TACCTTCAAGATCCACCTGGAAATCGTGTTGCTTCGTGGATTTTTAGCCA ACAGGTGGTTCGCGCTGTCTTTTTTACCTTTCAAGGCTTAGATTCCTTGA CTCAGTGATGTTGTTAGTGTATAAATTCGTATTTGAACGTTTTCACTACC TTAACTGAGTGACGCTAAATAACTAATAATTTATTGAAATTCTTTAAAAC AATTATATGTTAACCAATCTTTATAAAACGAAAATATTCAGAACTTATAC ATTTTGTTGAATCTTTGATGCTTATAATGGATATACAGACATCGACACAT CATATCCATGGGCTCGGAACACATGAGCTCCAACATCGTATTTTACATCC ACACATTCTACATTCAACTCAAGAAGAAACCCTTAATACAAGTACAGGCC AGCTAGAGCACGATTCCCAACATCTGCAACAACATCACCTCACTCATCAT CAGCAACAGGACGTTTCACCGACTTTGCACAATTTACAAAACACCCGCAC TGGTGATAGCCTGAGCACTACTATTAATACAAATCAAAATCAACATGGTC ATCAACATCTTTCCGGAAGTAACATGTATACCTCGTCTCAAATGGAAGAT AAGTCAAAAGCGAACAAGTATGATGAGTATTCAAGCCGGACACTGAGCAA CATTTCGGATGCCAATACGACGCCATCTGCAAACAATTTCATAACACAAT CCCAAGGAATAGAGTGGATAACAGCCATGAATGATATTCAAAACGGGGCA GAAGACTCACACAGTTCGCAGGGCAGTATTTCGGGTGATGGTAAGATATT TCTATAGATATACATATATGTATACTTACTAGTAACGTGTGACCTATCTC CTACCTAATCATTCACACTGATTTTCGCATCAGTAAAGATTTCTCACAAA GCTAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr4 | 1351717 | chr4 | 1112743..1113112 | 241..610 | 1850 | 100 | Plus |
chr4 | 1351717 | chr4 | 1109311..1109548 | 4..241 | 1190 | 100 | Plus |
chr4 | 1351717 | chr4 | 1116275..1116429 | 749..903 | 775 | 100 | Plus |
chr4 | 1351717 | chr4 | 1116058..1116200 | 609..751 | 715 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
4 | 1348131 | 4 | 1092259..1092628 | 241..610 | 1850 | 100 | Plus |
4 | 1348131 | 4 | 1088826..1089063 | 4..241 | 1190 | 100 | Plus |
4 | 1348131 | 4 | 1095791..1095946 | 749..904 | 780 | 100 | Plus |
4 | 1348131 | 4 | 1095574..1095716 | 609..751 | 715 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
4 | 1331231 | 4 | 1092259..1092628 | 241..610 | 1850 | 100 | Plus |
4 | 1331231 | 4 | 1088826..1089063 | 4..241 | 1190 | 100 | Plus |
4 | 1331231 | 4 | 1095791..1095946 | 749..904 | 780 | 100 | Plus |
4 | 1331231 | 4 | 1095574..1095716 | 609..751 | 715 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1486..1582 | 368..461 | 126 | 61.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2319..2386 | 389..461 | 110 | 65.8 | Plus |
Dbuz\Kepler | 722 | Dbuz\Kepler KEPLER 722bp | 426..456 | 824..794 | 110 | 83.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr4 | 1109307..1109547 | 1..240 | 99 | -> | Plus |
chr4 | 1112743..1113112 | 241..610 | 100 | -> | Plus |
chr4 | 1116060..1116200 | 611..751 | 100 | -> | Plus |
chr4 | 1116278..1116429 | 752..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sv-RD | 1..525 | 268..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sv-RD | 1..525 | 268..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sv-RF | 1..525 | 268..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sv-RD | 1..525 | 268..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sv-RF | 1..525 | 268..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sv-RD | 5..797 | 1..792 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sv-RD | 5..797 | 1..792 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sv-RD | 25..817 | 1..792 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sv-RD | 5..797 | 1..792 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sv-RD | 25..817 | 1..792 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 1095576..1095716 | 611..751 | 100 | -> | Plus |
4 | 1095794..1095945 | 752..903 | 100 | Plus | |
4 | 1088822..1089062 | 1..240 | 99 | -> | Plus |
4 | 1092259..1092628 | 241..610 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 1095576..1095716 | 611..751 | 100 | -> | Plus |
4 | 1095794..1095945 | 752..903 | 100 | Plus | |
4 | 1088822..1089062 | 1..240 | 99 | -> | Plus |
4 | 1092259..1092628 | 241..610 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 1095576..1095716 | 611..751 | 100 | -> | Plus |
4 | 1095794..1095945 | 752..903 | 100 | Plus | |
4 | 1088822..1089062 | 1..240 | 99 | -> | Plus |
4 | 1092259..1092628 | 241..610 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_4 | 1116202..1116342 | 611..751 | 100 | -> | Plus |
arm_4 | 1116420..1116571 | 752..903 | 100 | Plus | |
arm_4 | 1109448..1109688 | 1..240 | 99 | -> | Plus |
arm_4 | 1112885..1113254 | 241..610 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 1088822..1089062 | 1..240 | 99 | -> | Plus |
4 | 1092259..1092628 | 241..610 | 100 | -> | Plus |
4 | 1095576..1095716 | 611..751 | 100 | -> | Plus |
4 | 1095794..1095945 | 752..903 | 100 | Plus |
Translation from 267 to 806
> IP01047.pep MLIMDIQTSTHHIHGLGTHELQHRILHPHILHSTQEETLNTSTGQLEHDS QHLQQHHLTHHQQQDVSPTLHNLQNTRTGDSLSTTINTNQNQHGHQHLSG SNMYTSSQMEDKSKANKYDEYSSRTLSNISDANTTPSANNFITQSQGIEW ITAMNDIQNGAEDSHSSQGSISGDGKIFL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20618-PA | 554 | GF20618-PA | 1..159 | 4..175 | 336 | 48 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16406-PA | 842 | GG16406-PA | 1..174 | 4..175 | 670 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23966-PA | 862 | GH23966-PA | 1..179 | 4..175 | 238 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sv-PG | 628 | CG11049-PG | 1..175 | 1..175 | 931 | 100 | Plus |
sv-PC | 647 | CG11049-PC | 1..175 | 1..175 | 931 | 100 | Plus |
sv-PD | 680 | CG11049-PD | 1..175 | 1..175 | 931 | 100 | Plus |
sv-PF | 792 | CG11049-PF | 1..175 | 1..175 | 931 | 100 | Plus |
sv-PH | 842 | CG11049-PH | 1..175 | 1..175 | 931 | 100 | Plus |
sv-PA | 844 | CG11049-PA | 1..175 | 1..175 | 931 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14046-PA | 965 | GI14046-PA | 101..226 | 60..175 | 230 | 46 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18401-PA | 871 | GL18401-PA | 1..183 | 1..175 | 431 | 57.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\spa-sv-PA | 807 | GA27911-PA | 1..183 | 1..175 | 429 | 57.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13025-PA | 839 | GM13025-PA | 1..175 | 1..175 | 769 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24421-PA | 680 | GD24421-PA | 1..175 | 1..175 | 754 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13730-PA | 863 | GJ13730-PA | 1..168 | 1..175 | 202 | 43.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13586-PA | 935 | GK13586-PA | 65..181 | 66..174 | 267 | 50.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14566-PA | 847 | GE14566-PA | 1..177 | 1..175 | 699 | 81.4 | Plus |
Translation from 267 to 806
> IP01047.hyp MLIMDIQTSTHHIHGLGTHELQHRILHPHILHSTQEETLNTSTGQLEHDS QHLQQHHLTHHQQQDVSPTLHNLQNTRTGDSLSTTINTNQNQHGHQHLSG SNMYTSSQMEDKSKANKYDEYSSRTLSNISDANTTPSANNFITQSQGIEW ITAMNDIQNGAEDSHSSQGSISGDGKIFL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sv-PG | 628 | CG11049-PG | 1..175 | 1..175 | 931 | 100 | Plus |
sv-PC | 647 | CG11049-PC | 1..175 | 1..175 | 931 | 100 | Plus |
sv-PD | 680 | CG11049-PD | 1..175 | 1..175 | 931 | 100 | Plus |
sv-PF | 792 | CG11049-PF | 1..175 | 1..175 | 931 | 100 | Plus |
sv-PH | 842 | CG11049-PH | 1..175 | 1..175 | 931 | 100 | Plus |