BDGP Sequence Production Resources |
Search the DGRC for IP01169
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 11 |
Well: | 69 |
Vector: | pOT2 |
Associated Gene/Transcript | dmrt99B-RA |
Protein status: | IP01169.pep: gold |
Preliminary Size: | 1533 |
Sequenced Size: | 2343 |
Gene | Date | Evidence |
---|---|---|
CG15504 | 2005-01-01 | Successful iPCR screen |
dmrt99B | 2008-04-29 | Release 5.5 accounting |
dmrt99B | 2008-08-15 | Release 5.9 accounting |
dmrt99B | 2008-12-18 | 5.12 accounting |
2343 bp (2343 high quality bases) assembled on 2005-08-25
GenBank Submission: BT022192
> IP01169.complete TCATGTCGTTAGCGCGCGTGGATTGAATTCGAGAACTATGCGGATATAAA TAGTTAAACAATAAAACAATCAAACTACAAGCTAACAACAAACAATTAAA TACTAATCAAATAAGCTAAAGTGAAGTGTGTGCTCAGAAGTTTTTGACCT AACAACTAAATCCACATCGAGGTTTCTGATCTTCACGTCGAAATGAGTCT ACCGTCGGGTGTGGACATGCAGAATCTGATGTCCCAGCATCCGGTCTTGG GAGCACTGCCACCTGCTTTCTTCTTGCGAGCCGCCTCGGAACGCTACCAA AGGACGCCCAAGTGCGCCCGCTGCAGGAACCACGGAGTGGTCAGCGCCTT GAAGGGACACAAACGCTACTGCCGCTGGCGGGATTGCGTCTGCGCCAAAT GCACTCTAATCGCGGAACGCCAAAGGGTTATGGCTGCTCAGGTGGCCCTT CGACGCCAACAGGCCCAAGAAGAGAACGAGGCCCGCGAGCTGGGCCTGCT CTACACTTCGGTTCCTGGCCAGCAGAATGGCAGCGACAGTGCTACGCCCA CTCCGCACAGCCCCAACCACAGCGGCAGCGGCGGCTCGGGCAGCGGAGGA TCGGGCCAGAACGGCGTCTTCCACGGCGGGATTCCCTCGCCACCCAGCGA CGGCTTCGAGGCCAGCTCCACTCCCAATCATCACCAGCAGTCGCAGCAGC AGCAGCAGGCGCACCACCAACAGCACCTTAGCCACCCACACCAGCAGTCC CAGCGGTTCAATGGCAATGAATCCGACACGGATGGACGCACCCGTTCCGA GCACCTCAGCGTCGGTTTCTCGCCCACCAGAACCGAGCTGGATGAGAGTC CTGTGTCCAAGCGCGGAGCAGCCCTGTCGAACGAGACCGACCAGGACACG GGCTCCGAGTCCGGATCGCCGAGTAGTCCCCGGCCCAAGGTCGCCGGACT GTTCAATCTGACCGCCAGCTTGTCGCCCGCCCGCACTGGACCGCCCAGCT CGCCGGAATCGGATCTGGACGTGGATTCGGCGCCGGATGAGGCCACGCCG GAGAATCTCAGTCTCAAGAAGGAGGACAGCCAGTCGCCGCCCAACACGCC CGCCGAGAATCTTCATCTGCTGCGATCCTTCAGCAGCAGTCATGCCCAGG GCTTCCTGCCATATCACCACACGCAGTTCCTGGCCGCCGCCGGCCTGCCC GCCCACCACCACCCAGCGGCACACTCGCCGCACCACCAGCAGCAGCAACA GCAGCAGCAGCAGCAGCAGAACCACCTGCCACAGCACCACCAGCAACAGC AGCAGCAGCAGCAACAGCAGCAGAGATCGCCCATCGACGTCCTGATGAGG GTGTTCCCCAACCGACGGCGCAGCGATGTGGAGCAGCTGATGCAGCGGTT CCGTGGCGACGTGCTCCAGGCCATGGAGTGCATGCTGGCTGGCGAGGATT TGGGACAGACTCCGCCGCAGGTGCCGCCATCGCCGCCCTTTCCCATGAAG TCCGCCTTCTCCCCGCTGGTGCCGCCCTCGGTTTTCGGCTCCCCCACCCA TCGCTACCATCCCTTCATGCAGGCGCACGCCAAGCGATTCCTGACTGCTC CCTACGCCGGAACCGGCTACCTTCCGGGAGTGCTCAGTGCGGCGGATATC GAGCAATCCGAGTCCAACGGAGCGGGCGGCATAGGGTTGGATCGCACCAG CAATGCTGGCGACTCCCAGGATTGAGGCATCGAGGTGGAGGCCAGCGGCG CATCCGTCTTCAGGCCTTTCGAATAAGGTTCCCACCCCTGCTACACTGCG GAAAAATGTGAACACTTTACGAGTCAAGAACACAATTCTTAACTTCAATG AGTTTTAGAGCTCTCGTTTGTTTTTATAATATTTTCAGTCAGCTGAAACC ATAGAAGTTTTTCATTGCAGAAAGAACTTTCTTGATTTTTGAGCAACTGT TTCTCGCAGTGCACGTCCCGCAACTAAGTGTAAATTACATTTGCCCTCGA CTCTTAGCACAAGTATTGTAACATAGAGACCGTATAAGTAAATAATACGT TTAATGAATTAAAACTTAAGAAAAACCATACACTCGATCCCAGTTATAAG AAGTATTTGTTTAGCTGAAATTAACATTATGACGATGATGAGATTATTGT GTAAGCGATTGTTGATTGCAACCAACTAATTGAGATATCCGTGTGTACCA TATGAATATGAGCATATATATAATTATATTAAACATCATATTATGTCTTA GATAAAGTACATTTCAAACACTGTGTTAAAGTATTTAATAAATCTACAAA TAATTCAATAAAATAATGAAGAAATTAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 25518157..25519630 | 853..2326 | 7145 | 99 | Plus |
chr3R | 27901430 | chr3R | 25516027..25516441 | 439..853 | 1940 | 97.8 | Plus |
chr3R | 27901430 | chr3R | 25515219..25515559 | 1..341 | 1675 | 99.4 | Plus |
chr3R | 27901430 | chr3R | 25515641..25515747 | 339..445 | 535 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 29695552..29697027 | 853..2328 | 7380 | 100 | Plus |
3R | 32079331 | 3R | 29693423..29693837 | 439..853 | 2075 | 100 | Plus |
3R | 32079331 | 3R | 29692615..29692955 | 1..341 | 1705 | 100 | Plus |
3R | 32079331 | 3R | 29693037..29693143 | 339..445 | 535 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 29436383..29437858 | 853..2328 | 7380 | 100 | Plus |
3R | 31820162 | 3R | 29434254..29434668 | 439..853 | 2075 | 100 | Plus |
3R | 31820162 | 3R | 29433446..29433786 | 1..341 | 1705 | 100 | Plus |
3R | 31820162 | 3R | 29433868..29433974 | 339..445 | 535 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 1449..1536 | 2214..2305 | 144 | 65.2 | Plus |
Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 4047..4174 | 2192..2312 | 127 | 60.2 | Plus |
Tc3 | 1743 | Tc3 TC3 1743bp | 1498..1598 | 2316..2214 | 123 | 60.6 | Minus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 5815..5869 | 406..352 | 122 | 69.1 | Minus |
TART-C | 11124 | TART-C TARTC 11124bp | 7270..7324 | 406..352 | 122 | 69.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 25515219..25515557 | 1..339 | 99 | -> | Plus |
chr3R | 25515642..25515743 | 340..441 | 100 | -> | Plus |
chr3R | 25516030..25516441 | 442..853 | 97 | -> | Plus |
chr3R | 25518158..25519630 | 854..2326 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dmrt99B-RA | 1..1533 | 193..1725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dmrt99B-RA | 1..1533 | 193..1725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dmrt99B-RA | 1..1533 | 193..1725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dmrt99B-RA | 1..1533 | 193..1725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dmrt99B-RA | 1..1533 | 193..1725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dmrt99B-RA | 1..1533 | 193..1725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dmrt99B-RA | 25..2350 | 1..2326 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dmrt99B-RA | 25..2350 | 1..2326 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dmrt99B-RA | 1..1533 | 193..1725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dmrt99B-RA | 25..2350 | 1..2326 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29692615..29692953 | 1..339 | 100 | -> | Plus |
3R | 29693038..29693139 | 340..441 | 100 | -> | Plus |
3R | 29693426..29693837 | 442..853 | 100 | -> | Plus |
3R | 29695553..29697025 | 854..2326 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29692615..29692953 | 1..339 | 100 | -> | Plus |
3R | 29693038..29693139 | 340..441 | 100 | -> | Plus |
3R | 29693426..29693837 | 442..853 | 100 | -> | Plus |
3R | 29695553..29697025 | 854..2326 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29692615..29692953 | 1..339 | 100 | -> | Plus |
3R | 29693038..29693139 | 340..441 | 100 | -> | Plus |
3R | 29693426..29693837 | 442..853 | 100 | -> | Plus |
3R | 29695553..29697025 | 854..2326 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 25518337..25518675 | 1..339 | 100 | -> | Plus |
arm_3R | 25518760..25518861 | 340..441 | 100 | -> | Plus |
arm_3R | 25519148..25519559 | 442..853 | 100 | -> | Plus |
arm_3R | 25521275..25522747 | 854..2326 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29433446..29433784 | 1..339 | 100 | -> | Plus |
3R | 29433869..29433970 | 340..441 | 100 | -> | Plus |
3R | 29434257..29434668 | 442..853 | 100 | -> | Plus |
3R | 29436384..29437856 | 854..2326 | 100 | Plus |
Translation from 192 to 1724
> IP01169.pep MSLPSGVDMQNLMSQHPVLGALPPAFFLRAASERYQRTPKCARCRNHGVV SALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEENEAREL GLLYTSVPGQQNGSDSATPTPHSPNHSGSGGSGSGGSGQNGVFHGGIPSP PSDGFEASSTPNHHQQSQQQQQAHHQQHLSHPHQQSQRFNGNESDTDGRT RSEHLSVGFSPTRTELDESPVSKRGAALSNETDQDTGSESGSPSSPRPKV AGLFNLTASLSPARTGPPSSPESDLDVDSAPDEATPENLSLKKEDSQSPP NTPAENLHLLRSFSSSHAQGFLPYHHTQFLAAAGLPAHHHPAAHSPHHQQ QQQQQQQQQNHLPQHHQQQQQQQQQQQRSPIDVLMRVFPNRRRSDVEQLM QRFRGDVLQAMECMLAGEDLGQTPPQVPPSPPFPMKSAFSPLVPPSVFGS PTHRYHPFMQAHAKRFLTAPYAGTGYLPGVLSAADIEQSESNGAGGIGLD RTSNAGDSQD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23361-PA | 510 | GF23361-PA | 1..510 | 1..510 | 2019 | 92.4 | Plus |
Dana\GF19405-PA | 267 | GF19405-PA | 11..75 | 33..97 | 270 | 70.8 | Plus |
Dana\GF16494-PA | 325 | GF16494-PA | 40..103 | 37..100 | 249 | 64.1 | Plus |
Dana\GF16562-PA | 422 | GF16562-PA | 42..100 | 39..97 | 229 | 67.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11680-PA | 513 | GG11680-PA | 1..513 | 1..510 | 2595 | 97.9 | Plus |
Dere\GG24332-PA | 317 | GG24332-PA | 39..102 | 37..100 | 252 | 65.6 | Plus |
Dere\GG24818-PA | 428 | GG24818-PA | 42..100 | 39..97 | 228 | 67.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14316-PA | 518 | GH14316-PA | 1..518 | 1..510 | 2032 | 80.7 | Plus |
Dgri\GH17701-PA | 288 | GH17701-PA | 20..82 | 34..96 | 266 | 69.8 | Plus |
Dgri\GH18276-PA | 321 | GH18276-PA | 37..100 | 37..100 | 247 | 65.6 | Plus |
Dgri\GH22853-PA | 614 | GH22853-PA | 42..97 | 39..94 | 231 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dmrt99B-PA | 510 | CG15504-PA | 1..510 | 1..510 | 2718 | 100 | Plus |
dmrt11E-PA | 377 | CG15749-PA | 115..233 | 34..137 | 275 | 50.4 | Plus |
dsx-PF | 427 | CG11094-PF | 42..324 | 39..286 | 262 | 29.1 | Plus |
dsx-PC | 427 | CG11094-PC | 42..324 | 39..286 | 262 | 29.1 | Plus |
dsx-PB | 427 | CG11094-PB | 42..324 | 39..286 | 262 | 29.1 | Plus |
dsx-PD | 549 | CG11094-PD | 42..324 | 39..286 | 262 | 29.1 | Plus |
dsx-PA | 549 | CG11094-PA | 42..324 | 39..286 | 262 | 29.1 | Plus |
dsx-PE | 572 | CG11094-PE | 42..324 | 39..286 | 262 | 29.1 | Plus |
dmrt93B-PA | 325 | CG5737-PA | 1..102 | 1..100 | 243 | 49 | Plus |
fl(2)d-PA | 536 | CG6315-PA | 22..129 | 299..413 | 164 | 35.5 | Plus |
CG14442-PD | 529 | CG14442-PD | 21..157 | 327..465 | 162 | 35.6 | Plus |
CG14442-PB | 952 | CG14442-PB | 21..157 | 327..465 | 162 | 35.6 | Plus |
CG14442-PE | 958 | CG14442-PE | 21..157 | 327..465 | 162 | 35.6 | Plus |
CG14442-PC | 1008 | CG14442-PC | 21..157 | 327..465 | 162 | 35.6 | Plus |
CG14442-PA | 1034 | CG14442-PA | 21..157 | 327..465 | 162 | 35.6 | Plus |
Tlk-PG | 1489 | CG34412-PG | 90..306 | 162..380 | 158 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10413-PA | 511 | GI10413-PA | 1..511 | 1..510 | 1926 | 82.1 | Plus |
Dmoj\GI16108-PA | 263 | GI16108-PA | 11..78 | 30..97 | 269 | 66.2 | Plus |
Dmoj\GI24085-PA | 319 | GI24085-PA | 34..97 | 37..100 | 248 | 65.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13902-PA | 494 | GL13902-PA | 1..494 | 1..510 | 1900 | 80.8 | Plus |
Dper\GL11942-PA | 290 | GL11942-PA | 40..103 | 37..100 | 251 | 65.6 | Plus |
Dper\GL23549-PA | 436 | GL23549-PA | 42..100 | 39..97 | 230 | 67.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13771-PA | 506 | GA13771-PA | 1..506 | 1..510 | 2095 | 88.1 | Plus |
Dpse\GA13932-PA | 252 | GA13932-PA | 10..73 | 34..97 | 270 | 70.3 | Plus |
Dpse\GA19095-PA | 324 | GA19095-PA | 40..103 | 37..100 | 253 | 65.6 | Plus |
Dpse\GA10755-PB | 557 | GA10755-PB | 42..103 | 39..100 | 235 | 64.5 | Plus |
Dpse\GA10755-PC | 438 | GA10755-PC | 42..100 | 39..97 | 229 | 67.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12805-PA | 505 | GM12805-PA | 1..505 | 1..510 | 2607 | 98.4 | Plus |
Dsec\GM11626-PA | 164 | GM11626-PA | 15..78 | 34..97 | 265 | 71.9 | Plus |
Dsec\GM15062-PA | 325 | GM15062-PA | 39..102 | 37..100 | 252 | 65.6 | Plus |
Dsec\GM10444-PA | 550 | GM10444-PA | 42..103 | 39..100 | 232 | 64.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21451-PA | 509 | GD21451-PA | 1..509 | 1..510 | 1833 | 87.6 | Plus |
Dsim\GD24419-PA | 198 | GD24419-PA | 1..171 | 50..219 | 876 | 98.2 | Plus |
Dsim\GD19394-PA | 325 | GD19394-PA | 33..102 | 31..100 | 252 | 61.4 | Plus |
Dsim\GD19445-PA | 387 | GD19445-PA | 42..100 | 39..97 | 227 | 67.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10627-PA | 504 | GJ10627-PA | 1..504 | 1..510 | 1928 | 81.7 | Plus |
Dvir\GJ15759-PA | 279 | GJ15759-PA | 16..139 | 34..143 | 272 | 44.4 | Plus |
Dvir\GJ10903-PA | 310 | GJ10903-PA | 39..102 | 37..100 | 248 | 65.6 | Plus |
Dvir\dsx-PA | 575 | GJ11032-PA | 42..97 | 39..94 | 233 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11913-PA | 523 | GK11913-PA | 1..523 | 1..510 | 1961 | 84.1 | Plus |
Dwil\GK17058-PA | 241 | GK17058-PA | 17..81 | 34..98 | 268 | 69.2 | Plus |
Dwil\GK14181-PA | 332 | GK14181-PA | 41..104 | 37..100 | 245 | 64.1 | Plus |
Dwil\GK14297-PA | 190 | GK14297-PA | 42..95 | 39..92 | 215 | 70.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23869-PA | 512 | GE23869-PA | 1..512 | 1..510 | 2604 | 98.4 | Plus |
Dyak\GE17070-PA | 284 | GE17070-PA | 16..78 | 34..96 | 264 | 71.4 | Plus |
Dyak\GE11105-PA | 354 | GE11105-PA | 42..100 | 39..97 | 228 | 67.8 | Plus |
Dyak\GE25757-PA | 116 | GE25757-PA | 42..95 | 39..92 | 209 | 70.4 | Plus |
Translation from 192 to 1724
> IP01169.hyp MSLPSGVDMQNLMSQHPVLGALPPAFFLRAASERYQRTPKCARCRNHGVV SALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEENEAREL GLLYTSVPGQQNGSDSATPTPHSPNHSGSGGSGSGGSGQNGVFHGGIPSP PSDGFEASSTPNHHQQSQQQQQAHHQQHLSHPHQQSQRFNGNESDTDGRT RSEHLSVGFSPTRTELDESPVSKRGAALSNETDQDTGSESGSPSSPRPKV AGLFNLTASLSPARTGPPSSPESDLDVDSAPDEATPENLSLKKEDSQSPP NTPAENLHLLRSFSSSHAQGFLPYHHTQFLAAAGLPAHHHPAAHSPHHQQ QQQQQQQQQNHLPQHHQQQQQQQQQQQRSPIDVLMRVFPNRRRSDVEQLM QRFRGDVLQAMECMLAGEDLGQTPPQVPPSPPFPMKSAFSPLVPPSVFGS PTHRYHPFMQAHAKRFLTAPYAGTGYLPGVLSAADIEQSESNGAGGIGLD RTSNAGDSQD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dmrt99B-PA | 510 | CG15504-PA | 1..510 | 1..510 | 2718 | 100 | Plus |
dmrt11E-PA | 377 | CG15749-PA | 115..233 | 34..137 | 275 | 50.4 | Plus |
dsx-PF | 427 | CG11094-PF | 42..324 | 39..286 | 262 | 29.1 | Plus |
dsx-PC | 427 | CG11094-PC | 42..324 | 39..286 | 262 | 29.1 | Plus |
dsx-PB | 427 | CG11094-PB | 42..324 | 39..286 | 262 | 29.1 | Plus |